RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 PTPRFP10586 1907 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 SMCO2A6NFE2 343 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 IGF2BP3O00425 579 aaKnown RBP eCLIP12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 COPB2P35606 906 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 MAP2K2P36507 400 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 TM4SF4P48230 202 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 MRPL12P52815 198 aaKnown RBP12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 NUCB2P80303 420 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 TMEM132BQ14DG7 1078 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 TKFCQ3LXA3 575 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 LBX2Q6XYB7 198 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 NCAPG2Q86XI2 1143 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 FAM177A1Q8N128 213 aaPredicted RBP12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 FBXO18Q8NFZ0 1043 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 TRERF1Q96PN7 1200 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 CHMP5Q9NZZ3 219 aa12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 CIZ1Q9ULV3 898 aaPredicted RBP12.67□□□□□ -0.38
BRCC3P1-201ENST00000508559 PPP1R11O60927 126 aaPredicted RBP12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 SLC25A27O95847 323 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 KRT2P35908 639 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 GALNT17Q6IS24 598 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 MCF2L2Q86YR7 1114 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 ANKRD13CQ8N6S4 541 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 GPRC5AQ8NFJ5 357 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 ZIC5Q96T25 663 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 SPATC1LQ9H0A9 340 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 RNF146Q9NTX7 359 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 BTBD7Q9P203 1132 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 FBXO40Q9UH90 709 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 ADAMTS5Q9UNA0 930 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 MYH6P13533 1939 aa12.66□□□□□ -0.38
BRCC3P1-201ENST00000508559 ATP2A1O14983 1001 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 CFBP00751 764 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 MMP1P03956 469 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 ERVK-9P63128 1117 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 ERVK-24P63145 666 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 NSMFQ6X4W1 530 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 DIS3L2Q8IYB7 885 aaKnown RBP12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 BLIDQ8IZY5 108 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 ACAD9Q9H845 621 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 RIC8AQ9NPQ8 531 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 GJB4Q9NTQ9 266 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 RBPJLQ9UBG7 517 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 CPA4Q9UI42 421 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 PCDHA4Q9UN74 947 aa12.65□□□□□ -0.38
BRCC3P1-201ENST00000508559 ZNF536O15090 1300 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 CCDC194A0A1B0GVG4 234 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 ESYT2A0FGR8 921 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 CA12O43570 354 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 ZSCAN22P10073 491 aaPredicted RBP12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 TAL1P17542 331 aaPredicted RBP12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 MCTP2Q6DN12 878 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 FERMT3Q86UX7 667 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 RIOX2Q8IUF8 465 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 REXO1Q8N1G1 1221 aaKnown RBP12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 ANKRD35Q8N283 1001 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 CHST13Q8NET6 341 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 REPS2Q8NFH8 660 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 PHF20Q9BVI0 1012 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 ZMYND12Q9H0C1 365 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 EHMT1Q9H9B1 1298 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 ZNF214Q9UL59 606 aaPredicted RBP12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 IVNS1ABPQ9Y6Y0 642 aa12.64□□□□□ -0.39
BRCC3P1-201ENST00000508559 SPDYE3A6NKU9 549 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 PEX10O60683 326 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 TRPA1O75762 1119 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 CRHR2Q13324 411 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 UBE2SQ16763 222 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 FAM110CQ1W6H9 321 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 JAKMIP3Q5VZ66 844 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 RGS22Q8NE09 1264 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 MOV10L1Q9BXT6 1211 aaKnown RBP12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 ZSCAN16Q9H4T2 348 aaPredicted RBP12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 MROH8Q9H579 483 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 TXNRD2Q9NNW7 524 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 BIN2Q9UBW5 565 aaPredicted RBP12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 MTMR6Q9Y217 621 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 ATP6V1DQ9Y5K8 247 aa12.63□□□□□ -0.39
BRCC3P1-201ENST00000508559 BTBD18B2RXH4 712 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 NFIBO00712 420 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 TLR2O60603 784 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 CNMDO75829 334 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 ERCC3P19447 782 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 KCTD2Q14681 263 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 MUM1L1Q5H9M0 696 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 RNF207Q6ZRF8 634 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 KRT25Q7Z3Z0 450 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 BRAPQ7Z569 592 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 FCHSD1Q86WN1 690 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 DAGLBQ8NCG7 672 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 SHCBP1Q8NEM2 672 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 FOXP1Q9H334 677 aaPredicted RBP12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 MORF4L1Q9UBU8 362 aa12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 NOL7Q9UMY1 257 aaKnown RBP12.62□□□□□ -0.39
BRCC3P1-201ENST00000508559 RIPK3Q9Y572 518 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms