RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PKN1Q16512 942 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 PPP1R18Q6NYC8 613 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 CCDC83Q8IWF9 413 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 CCDC144CPQ8IYA2 1237 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 FAM43AQ8N2R8 423 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 NECAB1Q8N987 351 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 CWC22Q9HCG8 908 aaKnown RBP9.99□□□□□ -0.81
USP46-207ENST00000508499 FBXO28Q9NVF7 368 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 SAGE1Q9NXZ1 904 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 MAP3K20Q9NYL2 800 aaKnown RBP9.99□□□□□ -0.81
USP46-207ENST00000508499 PLXNB2O15031 1838 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 MYH15Q9Y2K3 1946 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 PTPDC1A2A3K4 754 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 CA12O43570 354 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 TLR2O60603 784 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 ZBED4O75132 1171 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 SCG2P13521 617 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 CDC37Q16543 378 aaPredicted RBP9.99□□□□□ -0.81
USP46-207ENST00000508499 FAM110CQ1W6H9 321 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 TKFCQ3LXA3 575 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 GALNT17Q6IS24 598 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 POTEEQ6S8J3 1075 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 NOL8Q76FK4 1167 aaKnown RBP9.99□□□□□ -0.81
USP46-207ENST00000508499 SHCBP1Q8NEM2 672 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 P2RX7Q99572 595 aaKnown RBP9.99□□□□□ -0.81
USP46-207ENST00000508499 AMNQ9BXJ7 453 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 UBA5Q9GZZ9 404 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 BARHL2Q9NY43 387 aa9.99□□□□□ -0.81
USP46-207ENST00000508499 SEC63Q9UGP8 760 aaKnown RBP9.99□□□□□ -0.81
USP46-207ENST00000508499 NAP1L2Q9ULW6 460 aaPredicted RBP9.99□□□□□ -0.81
USP46-207ENST00000508499 CASP8AP2Q9UKL3 1982 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 LCTP09848 1927 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 PLXNA1Q9UIW2 1896 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 RAD21O60216 631 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 PDCP20941 246 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 SLC16A2P36021 539 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 AKAP17AQ02040 695 aaKnown RBP9.98□□□□□ -0.81
USP46-207ENST00000508499 QRICH1Q2TAL8 776 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 RAB11FIP4Q86YS3 637 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 RIOX2Q8IUF8 465 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 DNAJC5GQ8N7S2 189 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 CCDC12Q8WUD4 166 aaPredicted RBP9.98□□□□□ -0.81
USP46-207ENST00000508499 PHKBQ93100 1093 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 KIFC2Q96AC6 838 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 ATG4CQ96DT6 458 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 PIGSQ96S52 555 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 TEX13BQ9BXU2 312 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 ZMYND12Q9H0C1 365 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 GLT8D2Q9H1C3 349 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 ORC3Q9UBD5 711 aaPredicted RBP9.98□□□□□ -0.81
USP46-207ENST00000508499 RBPJLQ9UBG7 517 aa9.98□□□□□ -0.81
USP46-207ENST00000508499 V9GY48 417 aaPredicted RBP9.98□□□□□ -0.81
USP46-207ENST00000508499 ABCB11O95342 1321 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 PIK3CDO00329 1044 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 PPP1R11O60927 126 aaPredicted RBP9.97□□□□□ -0.81
USP46-207ENST00000508499 CNMDO75829 334 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 SLC25A27O95847 323 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 BCRP11274 1271 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 XBP1P17861 261 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 DDIT3P35638 169 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 IKQ13123 557 aaPredicted RBP9.97□□□□□ -0.81
USP46-207ENST00000508499 TMEM132BQ14DG7 1078 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 C17orf99Q6UX52 265 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 FBXO11Q86XK2 927 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 CMTR1Q8N1G2 835 aaKnown RBP9.97□□□□□ -0.81
USP46-207ENST00000508499 DAGLBQ8NCG7 672 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 CHST13Q8NET6 341 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 CCDC148Q8NFR7 591 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 ZIC5Q96T25 663 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 SLC26A6Q9BXS9 759 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 CPVLQ9H3G5 476 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 ZFYVE28Q9HCC9 887 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 SMC3Q9UQE7 1217 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 MTMR7Q9Y216 660 aa9.97□□□□□ -0.81
USP46-207ENST00000508499 STXBP3O00186 592 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 JAK2O60674 1132 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 AOC2O75106 756 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 GJB2P29033 226 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 STAT3P40763 770 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 ERVK-9P63128 1117 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 ERVK-24P63145 666 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 CCNA1P78396 465 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 MAP2K1Q02750 393 aaPredicted RBP9.96□□□□□ -0.82
USP46-207ENST00000508499 MKRN3Q13064 507 aaKnown RBP9.96□□□□□ -0.82
USP46-207ENST00000508499 TAF1CQ15572 869 aaPredicted RBP9.96□□□□□ -0.82
USP46-207ENST00000508499 MCTP2Q6DN12 878 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 ABRAQ8N0Z2 381 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 FBXO18Q8NFZ0 1043 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 SMCR8Q8TEV9 937 aaPredicted RBP9.96□□□□□ -0.82
USP46-207ENST00000508499 IPO9Q96P70 1041 aaKnown RBP9.96□□□□□ -0.82
USP46-207ENST00000508499 PHF20Q9BVI0 1012 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 SPATC1LQ9H0A9 340 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 MROH8Q9H579 483 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 BTBD7Q9P203 1132 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 FBXO40Q9UH90 709 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 MRPL11Q9Y3B7 192 aaKnown RBP9.96□□□□□ -0.82
USP46-207ENST00000508499 PCDHA1Q9Y5I3 950 aa9.96□□□□□ -0.82
USP46-207ENST00000508499 LOC102724159A0A0B4J2E5 919 aa9.95□□□□□ -0.82
USP46-207ENST00000508499 CYP2C8P10632 490 aa9.95□□□□□ -0.82
USP46-207ENST00000508499 CALML3P27482 149 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms