RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PLCG2P16885 1265 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 GPTP24298 496 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 HNRNPH1P31943 449 aaKnown RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 ARL1P40616 181 aaPredicted RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 GRAMD4Q6IC98 578 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 GALNT17Q6IS24 598 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 STAMQ92783 540 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 CLIC6Q96NY7 704 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 EFHD1Q9BUP0 239 aa7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 METTL22Q9BUU2 404 aaPredicted RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 MOV10L1Q9BXT6 1211 aaKnown RBP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.99□□□□□ -1.13
UBE2D3-224ENST00000508474 GRID2IPA4D2P6 1211 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 N4BP1O75113 896 aaKnown RBP7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 SPAG7O75391 227 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 TXKP42681 527 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 TRAPPC10P48553 1259 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 ADCK5Q3MIX3 580 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 PIP4K2CQ8TBX8 421 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 CHMP6Q96FZ7 201 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 PCDHA13Q9Y5I0 950 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 PTPRTO14522 1441 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 HNRNPCL1O60812 293 aaKnown RBP7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 PPP1R37O75864 691 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 ESRRAP11474 423 aaPredicted RBP7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 SLC8A3P57103 927 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 POLR2FP61218 127 aaKnown RBP7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 MKRN3Q13064 507 aaKnown RBP7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 GRAMD1AQ96CP6 724 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 ST7Q9NRC1 585 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 TMEM51Q9NW97 253 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 CTTNBP2Q8WZ74 1663 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 REREQ9P2R6 1566 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 CRCPO75575 148 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 FBLN1P23142 703 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 CCND1P24385 295 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 CNGA1P29973 690 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 NR1H3Q13133 447 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 NBPF20Q3BBV1 942 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 FBXW10Q5XX13 1052 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 NUGGCQ68CJ6 796 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 SYMPKQ92797 1274 aaKnown RBP7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 MAGOHBQ96A72 148 aaKnown RBP7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 HOOK2Q96ED9 719 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 NRBF2Q96F24 287 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 B4DLN1 442 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 LAD1O00515 517 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 MOCS3O95396 460 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 ZFXP17010 805 aaPredicted RBP7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 PLTPP55058 493 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 MRPS35P82673 323 aaKnown RBP7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 KIF23Q02241 960 aaPredicted RBP7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 MAN2A1Q16706 1144 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 ARMCX3Q9UH62 379 aaPredicted RBP7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 ZDHHC9Q9Y397 364 aa7.98□□□□□ -1.13
UBE2D3-224ENST00000508474 TAF5LO75529 589 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 CCZ1BP86790 482 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 CCZ1P86791 482 aaPredicted RBP7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 CALCRLQ16602 461 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 ZNF449Q6P9G9 518 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 DYMQ7RTS9 669 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 TRIML2Q8N7C3 387 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 C3orf20Q8ND61 904 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 CEP70Q8NHQ1 597 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 UHMK1Q8TAS1 419 aaKnown RBP7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 CXorf38Q8TB03 319 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 SERPINI1Q99574 410 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 RAB20Q9NX57 234 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 ADGRG1Q9Y653 693 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 URB2Q14146 1524 aaKnown RBP7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 TTC36A6NLP5 189 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 ECEL1O95672 775 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 ATP1A3P13637 1013 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 PCYT1AP49585 367 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 BEND6Q5SZJ8 279 aaPredicted RBP7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 P2RX5Q93086 422 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 HINFPQ9BQA5 517 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 SAMSN1Q9NSI8 373 aaKnown RBP7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 DNM3Q9UQ16 869 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 HNRNPCP07910 306 aaKnown RBP eCLIP7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 MDH1P40925 334 aaKnown RBP7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 MSH2P43246 934 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 AKNAD1Q5T1N1 836 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 KRT80Q6KB66 452 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 CTAGE3PQ8IX95 158 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 ZNF473Q8WTR7 871 aaKnown RBP7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 RSAD2Q8WXG1 361 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 XAGE2Q96GT9 111 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 LRGUKQ96M69 825 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 FNBP1Q96RU3 617 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 HAUS7Q99871 368 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 FAM167BQ9BTA0 163 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 PITPNM3Q9BZ71 974 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 ECT2Q9H8V3 914 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 MCM9Q9NXL9 1143 aa7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 EDC4Q6P2E9 1401 aaKnown RBP7.97□□□□□ -1.13
UBE2D3-224ENST00000508474 PODXLO00592 558 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 TTC4O95801 387 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 SERPING1P05155 500 aa7.96□□□□□ -1.13
UBE2D3-224ENST00000508474 PDHA1P08559 390 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms