RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 MYCLP1P12525 358 aaPredicted RBP2.59□□□□□ -1.99
SMN2-208ENST00000508258 RAC2P15153 192 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 POU3F2P20265 443 aaPredicted RBP2.59□□□□□ -1.99
SMN2-208ENST00000508258 LTKP29376 864 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 KIR3DL1P43629 444 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 HK2P52789 917 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 SUMO1P63165 101 aaKnown RBP2.59□□□□□ -1.99
SMN2-208ENST00000508258 TNK2Q07912 1038 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 NBPF9Q3BBW0 867 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 FYB2Q5VWT5 728 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 NSMFQ6X4W1 530 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 JAMLQ86YT9 394 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 TRIM59Q8IWR1 403 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 PRPF38AQ8NAV1 312 aaKnown RBP2.59□□□□□ -1.99
SMN2-208ENST00000508258 BVESQ8NE79 360 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 GSTCDQ8NEC7 633 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 CHAC2Q8WUX2 184 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 RNF141Q8WVD5 230 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 LIN37Q96GY3 246 aaPredicted RBP2.59□□□□□ -1.99
SMN2-208ENST00000508258 CCDC120Q96HB5 630 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 ZNF512BQ96KM6 892 aaPredicted RBP2.59□□□□□ -1.99
SMN2-208ENST00000508258 FGD4Q96M96 766 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 KREMEN1Q96MU8 473 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 ALPK1Q96QP1 1244 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 DIRC2Q96SL1 478 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 CDC6Q99741 560 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 LGR4Q9BXB1 951 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 GBP3Q9H0R5 595 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 CAAP1Q9H8G2 361 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 TRIM39Q9HCM9 518 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 GP6Q9HCN6 339 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 FAM86C1Q9NVL1 165 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 FAM53CQ9NYF3 392 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 PRR13Q9NZ81 148 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 LMCD1Q9NZU5 365 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 KLHL42Q9P2K6 505 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 KCNH3Q9ULD8 1083 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 MAPRE3Q9UPY8 281 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 ATP8A1Q9Y2Q0 1164 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 ST14Q9Y5Y6 855 aa2.59□□□□□ -1.99
SMN2-208ENST00000508258 IRS4O14654 1257 aaPredicted RBP2.58□□□□□ -2
SMN2-208ENST00000508258 PRODHO43272 600 aa2.58□□□□□ -2
SMN2-208ENST00000508258 DLX3O60479 287 aa2.58□□□□□ -2
SMN2-208ENST00000508258 PPM1BO75688 479 aa2.58□□□□□ -2
SMN2-208ENST00000508258 PARNO95453 639 aaKnown RBP2.58□□□□□ -2
SMN2-208ENST00000508258 EYA4O95677 639 aa2.58□□□□□ -2
SMN2-208ENST00000508258 SCG5P05408 212 aa2.58□□□□□ -2
SMN2-208ENST00000508258 GLI1P08151 1106 aa2.58□□□□□ -2
SMN2-208ENST00000508258 SDSP20132 328 aa2.58□□□□□ -2
SMN2-208ENST00000508258 TPP2P29144 1249 aaPredicted RBP2.58□□□□□ -2
SMN2-208ENST00000508258 PMLP29590 882 aa2.58□□□□□ -2
SMN2-208ENST00000508258 SOX5P35711 763 aa2.58□□□□□ -2
SMN2-208ENST00000508258 CDKN1CP49918 316 aaPredicted RBP2.58□□□□□ -2
SMN2-208ENST00000508258 ZNF445P59923 1031 aa2.58□□□□□ -2
SMN2-208ENST00000508258 RNF4P78317 190 aa2.58□□□□□ -2
SMN2-208ENST00000508258 JAG1P78504 1218 aa2.58□□□□□ -2
SMN2-208ENST00000508258 C22orf34Q6ZV56 151 aa2.58□□□□□ -2
SMN2-208ENST00000508258 TMPRSS7Q7RTY8 843 aa2.58□□□□□ -2
SMN2-208ENST00000508258 THAP5Q7Z6K1 395 aa2.58□□□□□ -2
SMN2-208ENST00000508258 ADAT2Q7Z6V5 191 aaKnown RBP2.58□□□□□ -2
SMN2-208ENST00000508258 LRRTM3Q86VH5 581 aa2.58□□□□□ -2
SMN2-208ENST00000508258 DDX42Q86XP3 938 aaKnown RBP eCLIP2.58□□□□□ -2
SMN2-208ENST00000508258 AFAP1L2Q8N4X5 818 aa2.58□□□□□ -2
SMN2-208ENST00000508258 ABHD4Q8TB40 342 aa2.58□□□□□ -2
SMN2-208ENST00000508258 SLC7A14Q8TBB6 771 aa2.58□□□□□ -2
SMN2-208ENST00000508258 SYTL5Q8TDW5 730 aaPredicted RBP2.58□□□□□ -2
SMN2-208ENST00000508258 DDX1Q92499 740 aaKnown RBP2.58□□□□□ -2
SMN2-208ENST00000508258 C1orf159Q96HA4 380 aa2.58□□□□□ -2
SMN2-208ENST00000508258 COX4I2Q96KJ9 171 aa2.58□□□□□ -2
SMN2-208ENST00000508258 FAM84AQ96KN4 292 aa2.58□□□□□ -2
SMN2-208ENST00000508258 IER2Q9BTL4 223 aa2.58□□□□□ -2
SMN2-208ENST00000508258 TARS2Q9BW92 718 aaKnown RBP2.58□□□□□ -2
SMN2-208ENST00000508258 ASPNQ9BXN1 380 aa2.58□□□□□ -2
SMN2-208ENST00000508258 MKRN2Q9H000 416 aaKnown RBP2.58□□□□□ -2
SMN2-208ENST00000508258 TRIT1Q9H3H1 467 aaKnown RBP2.58□□□□□ -2
SMN2-208ENST00000508258 NSUN3Q9H649 340 aaKnown RBP2.58□□□□□ -2
SMN2-208ENST00000508258 SEMA3GQ9NS98 782 aa2.58□□□□□ -2
SMN2-208ENST00000508258 GPATCH2Q9NW75 528 aa2.58□□□□□ -2
SMN2-208ENST00000508258 LRP2BPQ9P2M1 347 aa2.58□□□□□ -2
SMN2-208ENST00000508258 MAGEC2Q9UBF1 373 aaPredicted RBP2.58□□□□□ -2
SMN2-208ENST00000508258 DUSP13Q9UII6 198 aa2.58□□□□□ -2
SMN2-208ENST00000508258 AKT3Q9Y243 479 aa2.58□□□□□ -2
SMN2-208ENST00000508258 DIS3Q9Y2L1 958 aaKnown RBP2.58□□□□□ -2
SMN2-208ENST00000508258 FHOD1Q9Y613 1164 aa2.58□□□□□ -2
SMN2-208ENST00000508258 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.57□□□□□ -2
SMN2-208ENST00000508258 ZNF503-AS2A6NEH8 195 aa2.57□□□□□ -2
SMN2-208ENST00000508258 DBX1A6NMT0 343 aa2.57□□□□□ -2
SMN2-208ENST00000508258 WASH4PA8MWX3 477 aa2.57□□□□□ -2
SMN2-208ENST00000508258 NOP56O00567 594 aaKnown RBP2.57□□□□□ -2
SMN2-208ENST00000508258 DNAJC8O75937 253 aaPredicted RBP2.57□□□□□ -2
SMN2-208ENST00000508258 NPTXRO95502 500 aa2.57□□□□□ -2
SMN2-208ENST00000508258 ITGA4P13612 1032 aa2.57□□□□□ -2
SMN2-208ENST00000508258 GDNFP39905 211 aa2.57□□□□□ -2
SMN2-208ENST00000508258 RAP1GAPP47736 663 aa2.57□□□□□ -2
SMN2-208ENST00000508258 GFRA1P56159 465 aa2.57□□□□□ -2
SMN2-208ENST00000508258 EVA1CP58658 441 aa2.57□□□□□ -2
SMN2-208ENST00000508258 GABREP78334 506 aa2.57□□□□□ -2
SMN2-208ENST00000508258 EXOSC10Q01780 885 aaKnown RBP2.57□□□□□ -2
SMN2-208ENST00000508258 EGR3Q06889 387 aa2.57□□□□□ -2
SMN2-208ENST00000508258 CYP4F3Q08477 520 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms