RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 DDX1Q92499 740 aaKnown RBP8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 CENPIQ92674 756 aaPredicted RBP8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 ZNF669Q96BR6 464 aaPredicted RBP8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 SPATA9Q9BWV2 254 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 NIFKQ9BYG3 293 aaKnown RBP8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 MAP10Q9P2G4 905 aa8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 EIF2B4Q9UI10 523 aaKnown RBP8.52□□□□□ -1.05
PDGFRA-206ENST00000508170 CEP164Q9UPV0 1460 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 SOS1Q07889 1333 aaPredicted RBP8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 C17orf113A0A1B0GUU1 675 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 TPP1O14773 563 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 KLHL41O60662 606 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 HSPA4LO95757 839 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 MYBL2P10244 700 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 IARSP41252 1262 aaKnown RBP8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 ID4P47928 161 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 AKAP17AQ02040 695 aaKnown RBP8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 MAP3K10Q02779 954 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 SEMA3AQ14563 771 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 DHCR24Q15392 516 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 CHADLQ6NUI6 762 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 CTR9Q6PD62 1173 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 BTNL9Q6UXG8 535 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 USP51Q70EK9 711 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 PPP1R14CQ8TAE6 165 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 ZNF606Q8WXB4 792 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 ARHGEF2Q92974 986 aaKnown RBP8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 NKD1Q969G9 470 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 AIFM3Q96NN9 605 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 C7orf25Q9BPX7 421 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 TTLL2Q9BWV7 592 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 ZNF358Q9NW07 568 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 CTNNA3Q9UI47 895 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 FAM184BQ9ULE4 1060 aa8.51□□□□□ -1.05
PDGFRA-206ENST00000508170 LINC00854A0A1B0GVQ3 168 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 AKR1B15C9JRZ8 316 aaPredicted RBP8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 PLD2O14939 933 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 MAFKO60675 156 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 GUCA1CO95843 209 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 CCNCP24863 283 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 SCNN1DP51172 638 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 ATXN1P54253 815 aaKnown RBP8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 PDE4BQ07343 736 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 FNDC3BQ53EP0 1204 aaKnown RBP8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 WDR44Q5JSH3 913 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 DESI1Q6ICB0 168 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 NUDT18Q6ZVK8 323 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 SYDE1Q6ZW31 735 aaPredicted RBP8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 MAML1Q92585 1016 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 USP6NLQ92738 828 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 CCDC74AQ96AQ1 378 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 UIMC1Q96RL1 719 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 BAG1Q99933 345 aaPredicted RBP8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 KCTD10Q9H3F6 313 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 SMOC1Q9H4F8 434 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 INTS7Q9NVH2 962 aaKnown RBP8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 GGA3Q9NZ52 723 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 JAG2Q9Y219 1238 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 SQORQ9Y6N5 450 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 A0A0G2JS52 829 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 A6NHS1 94 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 SLC27A2O14975 620 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 ATP1A3P13637 1013 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 P4HA1P13674 534 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 STMN1P16949 149 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 ELF1P32519 619 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 KRT9P35527 623 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 PPP2R3AQ06190 1150 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 LONRF2Q1L5Z9 754 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 CNSTQ6PJW8 725 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 CRTC1Q6UUV9 634 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 NEK10Q6ZWH5 1172 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 EPHX4Q8IUS5 362 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 GALNT12Q8IXK2 581 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 TRMT2AQ8IZ69 625 aaKnown RBP8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 EXOC2Q96KP1 924 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 C1orf74Q96LT6 269 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 NT5C1BQ96P26 610 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 TMEM121BQ9BXQ6 578 aaPredicted RBP8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 LAMP5Q9UJQ1 280 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 CDC23Q9UJX2 597 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 ZNF232Q9UNY5 417 aa8.5□□□□□ -1.05
PDGFRA-206ENST00000508170 KLHL33A6NCF5 533 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 NEMP1O14524 444 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 SLITRK5O94991 958 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 LTFP02788 710 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 MMEP08473 750 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 MYBP10242 640 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 ARAFP10398 606 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 RPS2P15880 293 aaKnown RBP8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 PHKA1P46020 1223 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 SLC12A2P55011 1212 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 SPARCL1Q14515 664 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 ODF1Q14990 250 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 CCDC85BQ15834 202 aaPredicted RBP8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 KDELC2Q7Z4H8 507 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 SLITRK4Q8IW52 837 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 FAM43AQ8N2R8 423 aa8.49□□□□□ -1.05
PDGFRA-206ENST00000508170 CCDC191Q8NCU4 936 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms