RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 SPZ1Q9BXG8 430 aa25.96■■□□□ 1.75
SNCB-204ENST00000508006 RANBP17Q9H2T7 1088 aaKnown RBP25.96■■□□□ 1.75
SNCB-204ENST00000508006 RIOX1Q9H6W3 641 aa25.96■■□□□ 1.75
SNCB-204ENST00000508006 TXNRD2Q9NNW7 524 aa25.96■■□□□ 1.75
SNCB-204ENST00000508006 GOLGA8AA7E2F4 631 aa25.95■■□□□ 1.74
SNCB-204ENST00000508006 COPB2P35606 906 aa25.95■■□□□ 1.74
SNCB-204ENST00000508006 SLC16A2P36021 539 aa25.95■■□□□ 1.74
SNCB-204ENST00000508006 POTEEQ6S8J3 1075 aa25.95■■□□□ 1.74
SNCB-204ENST00000508006 NAP1L2Q9ULW6 460 aaPredicted RBP25.95■■□□□ 1.74
SNCB-204ENST00000508006 MYH6P13533 1939 aa25.94■■□□□ 1.74
SNCB-204ENST00000508006 CNMDO75829 334 aa25.94■■□□□ 1.74
SNCB-204ENST00000508006 RGS2P41220 211 aa25.94■■□□□ 1.74
SNCB-204ENST00000508006 Q3C1V9 767 aa25.94■■□□□ 1.74
SNCB-204ENST00000508006 MAP3K21Q5TCX8 1036 aa25.94■■□□□ 1.74
SNCB-204ENST00000508006 ADGRF4Q8IZF3 695 aa25.94■■□□□ 1.74
SNCB-204ENST00000508006 UBA5Q9GZZ9 404 aa25.94■■□□□ 1.74
SNCB-204ENST00000508006 BTBD7Q9P203 1132 aa25.94■■□□□ 1.74
SNCB-204ENST00000508006 ZNF214Q9UL59 606 aaPredicted RBP25.94■■□□□ 1.74
SNCB-204ENST00000508006 PLXNB2O15031 1838 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 SLC25A27O95847 323 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 RXRAP19793 462 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 MCM2P49736 904 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 MNX1P50219 401 aaPredicted RBP25.93■■□□□ 1.74
SNCB-204ENST00000508006 CACNB2Q08289 660 aaPredicted RBP25.93■■□□□ 1.74
SNCB-204ENST00000508006 TMEM132BQ14DG7 1078 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 SAMD1Q6SPF0 538 aaPredicted RBP25.93■■□□□ 1.74
SNCB-204ENST00000508006 TMTC3Q6ZXV5 915 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 PLEKHH3Q7Z736 793 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 SHCBP1Q8NEM2 672 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 MTMR8Q96EF0 704 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 TEX13BQ9BXU2 312 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 SPATC1LQ9H0A9 340 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 LIMCH1Q9UPQ0 1083 aa25.93■■□□□ 1.74
SNCB-204ENST00000508006 MAGEA10P43363 369 aaPredicted RBP25.92■■□□□ 1.74
SNCB-204ENST00000508006 TRAF1Q13077 416 aa25.92■■□□□ 1.74
SNCB-204ENST00000508006 GPR142Q7Z601 462 aa25.92■■□□□ 1.74
SNCB-204ENST00000508006 CCDC144CPQ8IYA2 1237 aa25.92■■□□□ 1.74
SNCB-204ENST00000508006 UBE2OQ9C0C9 1292 aaKnown RBP25.92■■□□□ 1.74
SNCB-204ENST00000508006 PORCNQ9H237 461 aa25.92■■□□□ 1.74
SNCB-204ENST00000508006 JMJD4Q9H9V9 463 aa25.92■■□□□ 1.74
SNCB-204ENST00000508006 TPCN1Q9ULQ1 816 aa25.92■■□□□ 1.74
SNCB-204ENST00000508006 DHX16O60231 1041 aaKnown RBP25.91■■□□□ 1.74
SNCB-204ENST00000508006 STAT3P40763 770 aa25.91■■□□□ 1.74
SNCB-204ENST00000508006 GPR153Q6NV75 609 aa25.91■■□□□ 1.74
SNCB-204ENST00000508006 RIOX2Q8IUF8 465 aa25.91■■□□□ 1.74
SNCB-204ENST00000508006 DEFB123Q8N688 67 aa25.91■■□□□ 1.74
SNCB-204ENST00000508006 ZSCAN31Q96LW9 406 aaPredicted RBP25.91■■□□□ 1.74
SNCB-204ENST00000508006 FAM217BQ9NTX9 383 aaPredicted RBP25.91■■□□□ 1.74
SNCB-204ENST00000508006 PFKFB2O60825 505 aa25.9■■□□□ 1.74
SNCB-204ENST00000508006 ICAM1P05362 532 aa25.9■■□□□ 1.74
SNCB-204ENST00000508006 TKFCQ3LXA3 575 aa25.9■■□□□ 1.74
SNCB-204ENST00000508006 WDR78Q5VTH9 848 aa25.9■■□□□ 1.74
SNCB-204ENST00000508006 RAB11FIP4Q86YS3 637 aa25.9■■□□□ 1.74
SNCB-204ENST00000508006 TDHQ8IZJ6 230 aa25.9■■□□□ 1.74
SNCB-204ENST00000508006 SRBD1Q8N5C6 995 aaKnown RBP25.9■■□□□ 1.74
SNCB-204ENST00000508006 SLKQ9H2G2 1235 aaPredicted RBP25.9■■□□□ 1.74
SNCB-204ENST00000508006 MROH8Q9H579 483 aa25.9■■□□□ 1.74
SNCB-204ENST00000508006 LAMA3Q16787 3333 aa25.9■■□□□ 1.74
SNCB-204ENST00000508006 COL6A3P12111 3177 aa25.9■■□□□ 1.74
SNCB-204ENST00000508006 ZNF536O15090 1300 aa25.89■■□□□ 1.74
SNCB-204ENST00000508006 ZBTB5O15062 677 aa25.89■■□□□ 1.74
SNCB-204ENST00000508006 CYTH3O43739 400 aa25.89■■□□□ 1.74
SNCB-204ENST00000508006 CDC27P30260 824 aa25.89■■□□□ 1.74
SNCB-204ENST00000508006 CCND3P30281 292 aaPredicted RBP25.89■■□□□ 1.74
SNCB-204ENST00000508006 CDC37Q16543 378 aaPredicted RBP25.89■■□□□ 1.74
SNCB-204ENST00000508006 CCL14Q16627 93 aa25.89■■□□□ 1.74
SNCB-204ENST00000508006 CPLX2Q6PUV4 134 aaKnown RBP25.89■■□□□ 1.74
SNCB-204ENST00000508006 CPVLQ9H3G5 476 aa25.89■■□□□ 1.74
SNCB-204ENST00000508006 PLEKHA8P1O95397 391 aa25.88■■□□□ 1.73
SNCB-204ENST00000508006 ADD1P35611 737 aaKnown RBP25.88■■□□□ 1.73
SNCB-204ENST00000508006 PLS1Q14651 629 aa25.88■■□□□ 1.73
SNCB-204ENST00000508006 LRIT3Q3SXY7 679 aa25.88■■□□□ 1.73
SNCB-204ENST00000508006 MORN1Q5T089 497 aa25.88■■□□□ 1.73
SNCB-204ENST00000508006 USP6NLQ92738 828 aa25.88■■□□□ 1.73
SNCB-204ENST00000508006 RRP36Q96EU6 259 aaKnown RBP25.88■■□□□ 1.73
SNCB-204ENST00000508006 APBA2Q99767 749 aa25.88■■□□□ 1.73
SNCB-204ENST00000508006 MOV10L1Q9BXT6 1211 aaKnown RBP25.88■■□□□ 1.73
SNCB-204ENST00000508006 SH2B1Q9NRF2 756 aaPredicted RBP25.88■■□□□ 1.73
SNCB-204ENST00000508006 PFASO15067 1338 aa25.88■■□□□ 1.73
SNCB-204ENST00000508006 PNMA6FA0A0J9YX94 578 aa25.87■■□□□ 1.73
SNCB-204ENST00000508006 IFNAR1P17181 557 aa25.87■■□□□ 1.73
SNCB-204ENST00000508006 FUT2Q10981 343 aa25.87■■□□□ 1.73
SNCB-204ENST00000508006 SNRNP48Q6IEG0 339 aaKnown RBP25.87■■□□□ 1.73
SNCB-204ENST00000508006 CPXCR1Q8N123 301 aa25.87■■□□□ 1.73
SNCB-204ENST00000508006 LARP6Q9BRS8 491 aaKnown RBP25.87■■□□□ 1.73
SNCB-204ENST00000508006 MAF1Q9H063 256 aa25.87■■□□□ 1.73
SNCB-204ENST00000508006 RAVER2Q9HCJ3 691 aaKnown RBP25.87■■□□□ 1.73
SNCB-204ENST00000508006 VAT1LQ9HCJ6 419 aa25.87■■□□□ 1.73
SNCB-204ENST00000508006 FBXO40Q9UH90 709 aa25.87■■□□□ 1.73
SNCB-204ENST00000508006 CPLX1O14810 134 aa25.86■■□□□ 1.73
SNCB-204ENST00000508006 CDKL5O76039 1030 aa25.86■■□□□ 1.73
SNCB-204ENST00000508006 CCT2P78371 535 aaKnown RBP25.86■■□□□ 1.73
SNCB-204ENST00000508006 MAP2K5Q13163 448 aa25.86■■□□□ 1.73
SNCB-204ENST00000508006 NTRK3Q16288 839 aa25.86■■□□□ 1.73
SNCB-204ENST00000508006 ME3Q16798 604 aa25.86■■□□□ 1.73
SNCB-204ENST00000508006 SLC35G1Q2M3R5 365 aa25.86■■□□□ 1.73
SNCB-204ENST00000508006 QRICH1Q2TAL8 776 aa25.86■■□□□ 1.73
SNCB-204ENST00000508006 MFSD14CQ5VZR4 134 aa25.86■■□□□ 1.73
SNCB-204ENST00000508006 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.86■■□□□ 1.73
SNCB-204ENST00000508006 CHST13Q8NET6 341 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms