RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 DDX46Q7L014 1031 aaKnown RBP8.37□□□□□ -1.07
CLCN3-206ENST00000507875 PODNQ7Z5L7 613 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLCN3-206ENST00000507875 TSPAN18Q96SJ8 248 aa8.37□□□□□ -1.07
CLCN3-206ENST00000507875 CDC5LQ99459 802 aaKnown RBP8.37□□□□□ -1.07
CLCN3-206ENST00000507875 CTDP1Q9Y5B0 961 aaPredicted RBP8.37□□□□□ -1.07
CLCN3-206ENST00000507875 RFX7Q2KHR2 1363 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 LRRC37AA6NMS7 1700 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 GRIN3BO60391 1043 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 GLRX3O76003 335 aaKnown RBP8.36□□□□□ -1.07
CLCN3-206ENST00000507875 IFIT2P09913 472 aaKnown RBP8.36□□□□□ -1.07
CLCN3-206ENST00000507875 TM4SF1P30408 202 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 PHKA2P46019 1235 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 RAB27AP51159 221 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 TBC1D9BQ66K14 1250 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 XKR5Q6UX68 686 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 GK5Q6ZS86 529 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 CCAR1Q8IX12 1150 aaKnown RBP8.36□□□□□ -1.07
CLCN3-206ENST00000507875 SMAD5Q99717 465 aaKnown RBP8.36□□□□□ -1.07
CLCN3-206ENST00000507875 ANTXR1Q9H6X2 564 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 PRDM4Q9UKN5 801 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 ZNF609O15014 1411 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 MYH7P12883 1935 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 ENC1O14682 589 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 SASH1O94885 1247 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 GYS1P13807 737 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 GIPRP48546 466 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 IRX3P78415 501 aaPredicted RBP8.36□□□□□ -1.07
CLCN3-206ENST00000507875 LHFPL2Q6ZUX7 228 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 NBPF5PQ86XG9 351 aaPredicted RBP8.36□□□□□ -1.07
CLCN3-206ENST00000507875 TCEAL9Q9UHQ7 104 aa8.36□□□□□ -1.07
CLCN3-206ENST00000507875 ANKRD31Q8N7Z5 1873 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 DDAH1O94760 285 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 ITGA6P23229 1130 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 EMP3P54852 163 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 EIF6P56537 245 aaKnown RBP8.35□□□□□ -1.07
CLCN3-206ENST00000507875 MCL1Q07820 350 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 C4orf46Q504U0 113 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 PDE12Q6L8Q7 609 aaKnown RBP8.35□□□□□ -1.07
CLCN3-206ENST00000507875 ATG9AQ7Z3C6 839 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 STRA8Q7Z7C7 330 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 SLITRK4Q8IW52 837 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 IL17RAQ96F46 866 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 NLRP3Q96P20 1036 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 HHIPQ96QV1 700 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 C22orf23Q9BZE7 217 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 CCDC8Q9H0W5 538 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-206ENST00000507875 ECHDC1Q9NTX5 307 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 TNRC6CQ9HCJ0 1690 aaKnown RBP8.35□□□□□ -1.07
CLCN3-206ENST00000507875 DLEC1Q9Y238 1755 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 LDHAP00338 332 aaKnown RBP8.35□□□□□ -1.07
CLCN3-206ENST00000507875 IGHMBP2P38935 993 aaKnown RBP8.35□□□□□ -1.07
CLCN3-206ENST00000507875 STAT3P40763 770 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 ZNF157P51786 506 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-206ENST00000507875 ST5P78524 1137 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 SSRP1Q08945 709 aaKnown RBP8.35□□□□□ -1.07
CLCN3-206ENST00000507875 ZNF512BQ96KM6 892 aaPredicted RBP8.35□□□□□ -1.07
CLCN3-206ENST00000507875 NIFKQ9BYG3 293 aaKnown RBP8.35□□□□□ -1.07
CLCN3-206ENST00000507875 ZMYM5Q9UJ78 669 aa8.35□□□□□ -1.07
CLCN3-206ENST00000507875 KIF13BQ9NQT8 1826 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 HIP1O00291 1037 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 SNPHO15079 494 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 MMP10P09238 476 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 RELBQ01201 579 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 CLCQ05315 142 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 NFIXQ14938 502 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 TNNI3KQ59H18 835 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 KRT26Q7Z3Y9 468 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 AMIGO3Q86WK7 504 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 TTC30BQ8N4P2 665 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 ZNF513Q8N8E2 541 aaPredicted RBP8.34□□□□□ -1.07
CLCN3-206ENST00000507875 THAP3Q8WTV1 239 aaPredicted RBP8.34□□□□□ -1.07
CLCN3-206ENST00000507875 JARID2Q92833 1246 aaPredicted RBP8.34□□□□□ -1.07
CLCN3-206ENST00000507875 FERD3LQ96RJ6 166 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 ZSCAN10Q96SZ4 725 aaPredicted RBP8.34□□□□□ -1.07
CLCN3-206ENST00000507875 SRP68Q9UHB9 627 aaKnown RBP8.34□□□□□ -1.07
CLCN3-206ENST00000507875 PA2G4Q9UQ80 394 aaKnown RBP8.34□□□□□ -1.07
CLCN3-206ENST00000507875 FPGT-TNNI3KV9GXZ4 949 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 MYH13Q9UKX3 1938 aa8.34□□□□□ -1.07
CLCN3-206ENST00000507875 POTECB2RU33 542 aa8.34□□□□□ -1.08
CLCN3-206ENST00000507875 FAM153BP0C7A2 387 aa8.34□□□□□ -1.08
CLCN3-206ENST00000507875 ATP5JP18859 108 aa8.34□□□□□ -1.08
CLCN3-206ENST00000507875 NFKB2Q00653 900 aa8.34□□□□□ -1.08
CLCN3-206ENST00000507875 DHX9Q08211 1270 aaKnown RBP8.34□□□□□ -1.08
CLCN3-206ENST00000507875 PPP2R5AQ15172 486 aa8.34□□□□□ -1.08
CLCN3-206ENST00000507875 TCEA2Q15560 299 aa8.34□□□□□ -1.08
CLCN3-206ENST00000507875 AACSQ86V21 672 aa8.34□□□□□ -1.08
CLCN3-206ENST00000507875 LSRQ86X29 649 aaPredicted RBP8.34□□□□□ -1.08
CLCN3-206ENST00000507875 NLGN2Q8NFZ4 835 aa8.34□□□□□ -1.08
CLCN3-206ENST00000507875 DUOX1Q9NRD9 1551 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 KLRG2A4D1S0 409 aaPredicted RBP8.33□□□□□ -1.08
CLCN3-206ENST00000507875 EIF3JO75822 258 aaKnown RBP8.33□□□□□ -1.08
CLCN3-206ENST00000507875 ADH1CP00326 375 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 CES1P23141 567 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 PWP1Q13610 501 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 NFKBIBQ15653 356 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 C4orf17Q53FE4 359 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 TM4SF20Q53R12 229 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 LDHAL6AQ6ZMR3 332 aa8.33□□□□□ -1.08
CLCN3-206ENST00000507875 CNTROBQ8N137 903 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms