RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 RIC8AQ9NPQ8 531 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 TFIP11Q9UBB9 837 aaKnown RBP20.02■□□□□ 0.8
RNF4-209ENST00000507784 PCDHA6Q9UN73 950 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 MRPL11Q9Y3B7 192 aaKnown RBP20.02■□□□□ 0.8
RNF4-209ENST00000507784 PCDHA8Q9Y5H6 950 aa20.02■□□□□ 0.8
RNF4-209ENST00000507784 SMCHD1A6NHR9 2005 aa20.02■□□□□ 0.79
RNF4-209ENST00000507784 CCDC194A0A1B0GVG4 234 aa20.01■□□□□ 0.79
RNF4-209ENST00000507784 GRM1Q13255 1194 aa20.01■□□□□ 0.79
RNF4-209ENST00000507784 BRI3BPQ8WY22 251 aa20.01■□□□□ 0.79
RNF4-209ENST00000507784 GLT8D2Q9H1C3 349 aa20.01■□□□□ 0.79
RNF4-209ENST00000507784 TMEM260Q9NX78 707 aa20.01■□□□□ 0.79
RNF4-209ENST00000507784 PNMA2Q9UL42 364 aa20.01■□□□□ 0.79
RNF4-209ENST00000507784 ADAMTS5Q9UNA0 930 aa20.01■□□□□ 0.79
RNF4-209ENST00000507784 CNPY2Q9Y2B0 182 aa20.01■□□□□ 0.79
RNF4-209ENST00000507784 ZNF536O15090 1300 aa20.01■□□□□ 0.79
RNF4-209ENST00000507784 BTBD19C9JJ37 291 aa20■□□□□ 0.79
RNF4-209ENST00000507784 PDHXO00330 501 aa20■□□□□ 0.79
RNF4-209ENST00000507784 ATP2B1P20020 1258 aa20■□□□□ 0.79
RNF4-209ENST00000507784 CEBPZQ03701 1054 aaKnown RBP20■□□□□ 0.79
RNF4-209ENST00000507784 UBE2SQ16763 222 aa20■□□□□ 0.79
RNF4-209ENST00000507784 MYSM1Q5VVJ2 828 aa20■□□□□ 0.79
RNF4-209ENST00000507784 PIK3AP1Q6ZUJ8 805 aa20■□□□□ 0.79
RNF4-209ENST00000507784 CCDC102AQ96A19 550 aa20■□□□□ 0.79
RNF4-209ENST00000507784 PAGR1Q9BTK6 254 aa20■□□□□ 0.79
RNF4-209ENST00000507784 PNMA3Q9UL41 463 aa20■□□□□ 0.79
RNF4-209ENST00000507784 NOL7Q9UMY1 257 aaKnown RBP20■□□□□ 0.79
RNF4-209ENST00000507784 FAM205CA6NFA0 338 aa19.99■□□□□ 0.79
RNF4-209ENST00000507784 MANSC4A6NHS7 340 aaPredicted RBP19.99■□□□□ 0.79
RNF4-209ENST00000507784 SLC10A3P09131 477 aa19.99■□□□□ 0.79
RNF4-209ENST00000507784 HERVK_113P62684 666 aa19.99■□□□□ 0.79
RNF4-209ENST00000507784 KRT85P78386 507 aa19.99■□□□□ 0.79
RNF4-209ENST00000507784 TMEM132BQ14DG7 1078 aa19.99■□□□□ 0.79
RNF4-209ENST00000507784 NOM1Q5C9Z4 860 aaKnown RBP19.99■□□□□ 0.79
RNF4-209ENST00000507784 SNRNP48Q6IEG0 339 aaKnown RBP19.99■□□□□ 0.79
RNF4-209ENST00000507784 KRT25Q7Z3Z0 450 aa19.99■□□□□ 0.79
RNF4-209ENST00000507784 ANKRD23Q86SG2 305 aa19.99■□□□□ 0.79
RNF4-209ENST00000507784 REXO1Q8N1G1 1221 aaKnown RBP19.99■□□□□ 0.79
RNF4-209ENST00000507784 REPS2Q8NFH8 660 aa19.99■□□□□ 0.79
RNF4-209ENST00000507784 HOMER2Q9NSB8 354 aa19.99■□□□□ 0.79
RNF4-209ENST00000507784 GOLGA6L22H0YM25 854 aa19.98■□□□□ 0.79
RNF4-209ENST00000507784 CFBP00751 764 aa19.98■□□□□ 0.79
RNF4-209ENST00000507784 STAT3P40763 770 aa19.98■□□□□ 0.79
RNF4-209ENST00000507784 OAZ1P54368 228 aa19.98■□□□□ 0.79
RNF4-209ENST00000507784 EARS2Q5JPH6 523 aaKnown RBP19.98■□□□□ 0.79
RNF4-209ENST00000507784 USP17L6PQ6QN14 398 aa19.98■□□□□ 0.79
RNF4-209ENST00000507784 TNFRSF25Q93038 417 aa19.98■□□□□ 0.79
RNF4-209ENST00000507784 TRERF1Q96PN7 1200 aa19.98■□□□□ 0.79
RNF4-209ENST00000507784 CFAP45Q9UL16 551 aa19.98■□□□□ 0.79
RNF4-209ENST00000507784 M0R2N6 131 aa19.97■□□□□ 0.79
RNF4-209ENST00000507784 FIBPO43427 364 aa19.97■□□□□ 0.79
RNF4-209ENST00000507784 LBX2Q6XYB7 198 aa19.97■□□□□ 0.79
RNF4-209ENST00000507784 CLEC17AQ6ZS10 378 aa19.97■□□□□ 0.79
RNF4-209ENST00000507784 MB21D1Q8N884 522 aa19.97■□□□□ 0.79
RNF4-209ENST00000507784 TBC1D5Q92609 795 aa19.97■□□□□ 0.79
RNF4-209ENST00000507784 PGBD1Q96JS3 809 aa19.97■□□□□ 0.79
RNF4-209ENST00000507784 USP28Q96RU2 1077 aa19.97■□□□□ 0.79
RNF4-209ENST00000507784 GDPD2Q9HCC8 539 aa19.97■□□□□ 0.79
RNF4-209ENST00000507784 GCOM1H8Y6P7 765 aaPredicted RBP19.96■□□□□ 0.79
RNF4-209ENST00000507784 PEX10O60683 326 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 POLR2MP0CAP2 368 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 CYP2C8P10632 490 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 MCM4P33991 863 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 NONOQ15233 471 aaKnown RBP eCLIP19.96■□□□□ 0.796e-7■■■□□ 19.2
RNF4-209ENST00000507784 RILPL1Q5EBL4 403 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 MUM1L1Q5H9M0 696 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 ATL3Q6DD88 541 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 MCF2L2Q86YR7 1114 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 FAM43AQ8N2R8 423 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 TEX13BQ9BXU2 312 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 RNF146Q9NTX7 359 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 BTBD7Q9P203 1132 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 ZNF214Q9UL59 606 aaPredicted RBP19.96■□□□□ 0.79
RNF4-209ENST00000507784 SLC45A1Q9Y2W3 748 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 RIPK3Q9Y572 518 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 CLIC4Q9Y696 253 aa19.96■□□□□ 0.79
RNF4-209ENST00000507784 OPLAHO14841 1288 aa19.95■□□□□ 0.78
RNF4-209ENST00000507784 HOXA13P31271 388 aaPredicted RBP19.95■□□□□ 0.78
RNF4-209ENST00000507784 APLP1P51693 650 aa19.95■□□□□ 0.78
RNF4-209ENST00000507784 NFKBIBQ15653 356 aa19.95■□□□□ 0.78
RNF4-209ENST00000507784 INF2Q27J81 1249 aa19.95■□□□□ 0.78
RNF4-209ENST00000507784 TKFCQ3LXA3 575 aa19.95■□□□□ 0.78
RNF4-209ENST00000507784 TPRNQ4KMQ1 711 aa19.95■□□□□ 0.78
RNF4-209ENST00000507784 CYP4F22Q6NT55 531 aa19.95■□□□□ 0.78
RNF4-209ENST00000507784 FCHSD1Q86WN1 690 aa19.95■□□□□ 0.78
RNF4-209ENST00000507784 SMCR8Q8TEV9 937 aaPredicted RBP19.95■□□□□ 0.78
RNF4-209ENST00000507784 HHIPL1Q96JK4 782 aa19.95■□□□□ 0.78
RNF4-209ENST00000507784 SPATA32Q96LK8 384 aa19.95■□□□□ 0.78
RNF4-209ENST00000507784 PTPN18Q99952 460 aa19.95■□□□□ 0.78
RNF4-209ENST00000507784 FTOQ9C0B1 505 aaKnown RBP eCLIP19.95■□□□□ 0.78
RNF4-209ENST00000507784 TESPA1A2RU30 521 aaPredicted RBP19.94■□□□□ 0.78
RNF4-209ENST00000507784 FAM155AB1AL88 458 aaPredicted RBP19.94■□□□□ 0.78
RNF4-209ENST00000507784 MEIS2O14770 477 aa19.94■□□□□ 0.78
RNF4-209ENST00000507784 ATP2A1O14983 1001 aa19.94■□□□□ 0.78
RNF4-209ENST00000507784 PRPF40AO75400 957 aaKnown RBP19.94■□□□□ 0.78
RNF4-209ENST00000507784 CLK2P49760 499 aaKnown RBP19.94■□□□□ 0.78
RNF4-209ENST00000507784 TOB1P50616 345 aaPredicted RBP19.94■□□□□ 0.78
RNF4-209ENST00000507784 NBR1Q14596 966 aa19.94■□□□□ 0.78
RNF4-209ENST00000507784 STK38Q15208 465 aa19.94■□□□□ 0.78
RNF4-209ENST00000507784 CSPP1Q1MSJ5 1256 aa19.94■□□□□ 0.78
RNF4-209ENST00000507784 DEFB115Q30KQ5 88 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms