RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 FAM133AQ8N9E0 248 aa16.66■□□□□ 0.26
DDR1-260ENST00000507533 HOMER2Q9NSB8 354 aa16.66■□□□□ 0.26
DDR1-260ENST00000507533 NYAP2Q9P242 653 aa16.66■□□□□ 0.26
DDR1-260ENST00000507533 EXOC6BQ9Y2D4 811 aa16.66■□□□□ 0.26
DDR1-260ENST00000507533 ASB14A6NK59 587 aa16.65■□□□□ 0.26
DDR1-260ENST00000507533 SUPT20HL2P0C7V6 817 aa16.65■□□□□ 0.26
DDR1-260ENST00000507533 OAZ1P54368 228 aa16.65■□□□□ 0.26
DDR1-260ENST00000507533 CTR9Q6PD62 1173 aa16.65■□□□□ 0.26
DDR1-260ENST00000507533 HERC6Q8IVU3 1022 aa16.65■□□□□ 0.26
DDR1-260ENST00000507533 IL1RAPL2Q9NP60 686 aa16.65■□□□□ 0.26
DDR1-260ENST00000507533 TRMT13Q9NUP7 481 aaKnown RBP16.65■□□□□ 0.26
DDR1-260ENST00000507533 SOWAHBA6NEL2 793 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 LPXNO60711 386 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 ADD2P35612 726 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 ZKSCAN2Q63HK3 967 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 IQSEC1Q6DN90 963 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.64■□□□□ 0.25
DDR1-260ENST00000507533 UIMC1Q96RL1 719 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 PDGFCQ9NRA1 345 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 CLIP2Q9UDT6 1046 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 FEM1BQ9UK73 627 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 Q9Y3F1 56 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 SLC4A4Q9Y6R1 1079 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 TNKSO95271 1327 aa16.64■□□□□ 0.25
DDR1-260ENST00000507533 RFC2P35250 354 aa16.63■□□□□ 0.25
DDR1-260ENST00000507533 TMEM63BQ5T3F8 832 aa16.63■□□□□ 0.25
DDR1-260ENST00000507533 SPRED2Q7Z698 418 aa16.63■□□□□ 0.25
DDR1-260ENST00000507533 GJD3Q8N144 294 aa16.63■□□□□ 0.25
DDR1-260ENST00000507533 FTOQ9C0B1 505 aaKnown RBP eCLIP16.63■□□□□ 0.25
DDR1-260ENST00000507533 ACAD9Q9H845 621 aa16.63■□□□□ 0.25
DDR1-260ENST00000507533 COG6Q9Y2V7 657 aa16.63■□□□□ 0.25
DDR1-260ENST00000507533 DDX49Q9Y6V7 483 aaKnown RBP16.63■□□□□ 0.25
DDR1-260ENST00000507533 MYH8P13535 1937 aa16.62■□□□□ 0.25
DDR1-260ENST00000507533 RASA1P20936 1047 aa16.62■□□□□ 0.25
DDR1-260ENST00000507533 TAPT1Q6NXT6 567 aa16.62■□□□□ 0.25
DDR1-260ENST00000507533 EEPD1Q7L9B9 569 aa16.62■□□□□ 0.25
DDR1-260ENST00000507533 FBXO16Q8IX29 292 aaPredicted RBP16.62■□□□□ 0.25
DDR1-260ENST00000507533 STK11IPQ8N1F8 1099 aa16.62■□□□□ 0.25
DDR1-260ENST00000507533 MKNK2Q9HBH9 465 aa16.62■□□□□ 0.25
DDR1-260ENST00000507533 A1CFQ9NQ94 594 aaKnown RBP16.62■□□□□ 0.25
DDR1-260ENST00000507533 LMCD1Q9NZU5 365 aa16.62■□□□□ 0.25
DDR1-260ENST00000507533 ZBED9Q6R2W3 1325 aa16.62■□□□□ 0.25
DDR1-260ENST00000507533 MCM3APO60318 1980 aa16.61■□□□□ 0.25
DDR1-260ENST00000507533 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
DDR1-260ENST00000507533 FAM178BQ8IXR5 827 aa16.61■□□□□ 0.25
DDR1-260ENST00000507533 RHPN1Q8TCX5 695 aa16.61■□□□□ 0.25
DDR1-260ENST00000507533 SNX27Q96L92 541 aa16.61■□□□□ 0.25
DDR1-260ENST00000507533 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.61■□□□□ 0.252e-7■■■□□ 14.8
DDR1-260ENST00000507533 UBE2ZQ9H832 354 aaPredicted RBP16.61■□□□□ 0.25
DDR1-260ENST00000507533 RNF146Q9NTX7 359 aa16.61■□□□□ 0.25
DDR1-260ENST00000507533 POLR3EQ9NVU0 708 aa16.61■□□□□ 0.25
DDR1-260ENST00000507533 PAG1Q9NWQ8 432 aa16.61■□□□□ 0.25
DDR1-260ENST00000507533 CHGBP05060 677 aa16.6■□□□□ 0.25
DDR1-260ENST00000507533 IQCF3P0C7M6 154 aa16.6■□□□□ 0.25
DDR1-260ENST00000507533 FDX1P10109 184 aa16.6■□□□□ 0.25
DDR1-260ENST00000507533 ALADP13716 330 aa16.6■□□□□ 0.25
DDR1-260ENST00000507533 SSTR3P32745 418 aaPredicted RBP16.6■□□□□ 0.25
DDR1-260ENST00000507533 HNRNPUQ00839 825 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDR1-260ENST00000507533 NHLH1Q02575 133 aa16.6■□□□□ 0.25
DDR1-260ENST00000507533 CSPP1Q1MSJ5 1256 aa16.6■□□□□ 0.25
DDR1-260ENST00000507533 KIAA1211Q6ZU35 1233 aa16.6■□□□□ 0.25
DDR1-260ENST00000507533 ITPRIPQ8IWB1 547 aa16.6■□□□□ 0.25
DDR1-260ENST00000507533 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
DDR1-260ENST00000507533 RETREG2Q8NC44 543 aa16.6■□□□□ 0.25
DDR1-260ENST00000507533 GDPD5Q8WTR4 605 aa16.6■□□□□ 0.25
DDR1-260ENST00000507533 ARPP21Q9UBL0 812 aaPredicted RBP16.6■□□□□ 0.25
DDR1-260ENST00000507533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.59■□□□□ 0.25
DDR1-260ENST00000507533 MYL3P08590 195 aa16.59■□□□□ 0.25
DDR1-260ENST00000507533 IFIT2P09913 472 aaKnown RBP16.59■□□□□ 0.25
DDR1-260ENST00000507533 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
DDR1-260ENST00000507533 FAM47CQ5HY64 1035 aa16.59■□□□□ 0.25
DDR1-260ENST00000507533 MKL1Q969V6 931 aa16.59■□□□□ 0.25
DDR1-260ENST00000507533 BCL11AQ9H165 835 aa16.59■□□□□ 0.25
DDR1-260ENST00000507533 BOLA2Q9H3K6 86 aa16.59■□□□□ 0.25
DDR1-260ENST00000507533 BAZ2AQ9UIF9 1905 aaKnown RBP16.58■□□□□ 0.25
DDR1-260ENST00000507533 IGKV6D-41A0A0C4DH26 115 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 LCHNA4D1U4 455 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 TMEM232C9JQI7 657 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 PITPNM1O00562 1244 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 BAIAP3O94812 1187 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 BMP3P12645 472 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 KCNJ6P48051 423 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 PURAQ00577 322 aaKnown RBP16.58■□□□□ 0.24
DDR1-260ENST00000507533 UBE3CQ15386 1083 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 LEXMQ3ZCV2 418 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 DUSP28Q4G0W2 176 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 FTSJ3Q8IY81 847 aaKnown RBP16.58■□□□□ 0.24
DDR1-260ENST00000507533 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.58■□□□□ 0.24
DDR1-260ENST00000507533 TRERF1Q96PN7 1200 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 MTG1Q9BT17 334 aaPredicted RBP16.58■□□□□ 0.24
DDR1-260ENST00000507533 ZBED2Q9BTP6 218 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 VTA1Q9NP79 307 aa16.58■□□□□ 0.24
DDR1-260ENST00000507533 GPHNQ9NQX3 736 aaPredicted RBP16.58■□□□□ 0.24
DDR1-260ENST00000507533 ISY1Q9ULR0 285 aaKnown RBP16.58■□□□□ 0.24
DDR1-260ENST00000507533 ZNF536O15090 1300 aa16.57■□□□□ 0.24
DDR1-260ENST00000507533 MINDY4BA8MYZ0 360 aa16.57■□□□□ 0.24
DDR1-260ENST00000507533 ALAS1P13196 640 aa16.57■□□□□ 0.24
DDR1-260ENST00000507533 KCNA5P22460 613 aa16.57■□□□□ 0.24
DDR1-260ENST00000507533 NBPF20Q3BBV1 942 aa16.57■□□□□ 0.24
DDR1-260ENST00000507533 TKFCQ3LXA3 575 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms