RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 TMEM265A0A087WTH1 108 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 RAPGEF3O95398 923 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 MED26O95402 600 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 THBDP07204 575 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 ECI1P42126 302 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 GYS2P54840 703 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 TCEA2Q15560 299 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 CWF19L1Q69YN2 538 aaKnown RBP5.06□□□□□ -1.6
LSM6-205ENST00000507449 ZPBP2Q6X784 338 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 NPLOC4Q8TAT6 608 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 FRS2Q8WU20 508 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 CWC22Q9HCG8 908 aaKnown RBP5.06□□□□□ -1.6
LSM6-205ENST00000507449 GPRC5CQ9NQ84 441 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 DUSP13Q9UII6 198 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 TMEFF2Q9UIK5 374 aaPredicted RBP5.06□□□□□ -1.6
LSM6-205ENST00000507449 TCFL5Q9UL49 500 aa5.06□□□□□ -1.6
LSM6-205ENST00000507449 DNAJC25-GNG10A0A024R161 153 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 CCDC163A0A0D9SF12 145 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 ANKRD62A6NC57 917 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 C2orf71A6NGG8 1288 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 GRIK1P39086 918 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 KCNJ6P48051 423 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 PCBP3P57721 371 aaKnown RBP5.05□□□□□ -1.6
LSM6-205ENST00000507449 SUMO1P63165 101 aaKnown RBP5.05□□□□□ -1.6
LSM6-205ENST00000507449 TEKQ02763 1124 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 BNIP3Q12983 259 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 TRIM61Q5EBN2 209 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 RCSD1Q6JBY9 416 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 NFXL1Q6ZNB6 911 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 TMPRSS7Q7RTY8 843 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 CREG2Q8IUH2 290 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 CCDC103Q8IW40 242 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 SYNPOQ8N3V7 929 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 SLC7A14Q8TBB6 771 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 KCTD13Q8WZ19 329 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 HRASLS5Q96KN8 279 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 AP5S1Q9NUS5 200 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 BACE2Q9Y5Z0 518 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 ASXL2Q76L83 1435 aa5.05□□□□□ -1.6
LSM6-205ENST00000507449 PLD2O14939 933 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 FGF10O15520 208 aaPredicted RBP5.04□□□□□ -1.6
LSM6-205ENST00000507449 FKTNO75072 461 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 RFPL3O75679 317 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 C8AP07357 584 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 GSTM1P09488 218 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 LTKP29376 864 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 PRKCQQ04759 706 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 PABPC4Q13310 644 aaKnown RBP eCLIP5.04□□□□□ -1.6
LSM6-205ENST00000507449 TESK1Q15569 626 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 AOC3Q16853 763 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 FBLN7Q53RD9 439 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 MBLAC2Q68D91 279 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 RNF111Q6ZNA4 994 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 SPRED2Q7Z698 418 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 GSTCDQ8NEC7 633 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 BCL7CQ8WUZ0 217 aaPredicted RBP5.04□□□□□ -1.6
LSM6-205ENST00000507449 GPATCH3Q96I76 525 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 CCDC140Q96MF4 163 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 MRPL4Q9BYD3 311 aaKnown RBP5.04□□□□□ -1.6
LSM6-205ENST00000507449 SLC52A2Q9HAB3 445 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 TRIM39Q9HCM9 518 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 VAV3Q9UKW4 847 aa5.04□□□□□ -1.6
LSM6-205ENST00000507449 FAM83GA6ND36 823 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 KCNQ2O43526 872 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 CPP00450 1065 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 PLS3P13797 630 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 SDSP20132 328 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 NOP2P46087 812 aaKnown RBP5.03□□□□□ -1.6
LSM6-205ENST00000507449 EGR3Q06889 387 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 FNDC3BQ53EP0 1204 aaKnown RBP5.03□□□□□ -1.6
LSM6-205ENST00000507449 TM4SF20Q53R12 229 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 ACBD5Q5T8D3 534 aaPredicted RBP5.03□□□□□ -1.6
LSM6-205ENST00000507449 KCNT2Q6UVM3 1135 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 ZNF574Q6ZN55 896 aaPredicted RBP5.03□□□□□ -1.6
LSM6-205ENST00000507449 DHX37Q8IY37 1157 aaKnown RBP5.03□□□□□ -1.6
LSM6-205ENST00000507449 POU5F2Q8N7G0 328 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 TMEM52Q8NDY8 209 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 ASB11Q8WXH4 323 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 NINJ1Q92982 152 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 SCLYQ96I15 445 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 G6PC3Q9BUM1 346 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 CLEC1BQ9P126 229 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 EBF1Q9UH73 591 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 TRAF6Q9Y4K3 522 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 NPFFR2Q9Y5X5 522 aa5.03□□□□□ -1.6
LSM6-205ENST00000507449 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.02□□□□□ -1.61
LSM6-205ENST00000507449 KIAA1324LA8MWY0 1029 aaPredicted RBP5.02□□□□□ -1.61
LSM6-205ENST00000507449 IRS4O14654 1257 aaPredicted RBP5.02□□□□□ -1.61
LSM6-205ENST00000507449 DNAJC8O75937 253 aaPredicted RBP5.02□□□□□ -1.61
LSM6-205ENST00000507449 PRNPP04156 253 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 CD8BP10966 210 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 LCP1P13796 627 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 SPINK2P20155 84 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 MASP1P48740 699 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 SEPHS1P49903 392 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 EEF1DP3Q658K8 133 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 STYK1Q6J9G0 422 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 OGFOD2Q6N063 350 aa5.02□□□□□ -1.61
LSM6-205ENST00000507449 INTS5Q6P9B9 1019 aaKnown RBP5.02□□□□□ -1.61
LSM6-205ENST00000507449 USP53Q70EK8 1073 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms