RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 MSL3Q8N5Y2 521 aaKnown RBP22.48■■□□□ 1.19
LMNA-221ENST00000506981 TINF2Q9BSI4 451 aa22.48■■□□□ 1.19
LMNA-221ENST00000506981 MYL10Q9BUA6 226 aa22.48■■□□□ 1.19
LMNA-221ENST00000506981 JMJD4Q9H9V9 463 aa22.48■■□□□ 1.19
LMNA-221ENST00000506981 ABCB11O95342 1321 aa22.48■■□□□ 1.19
LMNA-221ENST00000506981 TFRCP02786 760 aaKnown RBP22.47■■□□□ 1.19
LMNA-221ENST00000506981 TAL1P17542 331 aaPredicted RBP22.47■■□□□ 1.19
LMNA-221ENST00000506981 CCND3P30281 292 aaPredicted RBP22.47■■□□□ 1.19
LMNA-221ENST00000506981 GNAQP50148 359 aa22.47■■□□□ 1.19
LMNA-221ENST00000506981 QRICH1Q2TAL8 776 aa22.47■■□□□ 1.19
LMNA-221ENST00000506981 FBXO11Q86XK2 927 aa22.47■■□□□ 1.19
LMNA-221ENST00000506981 TCEANC2Q96MN5 208 aa22.47■■□□□ 1.19
LMNA-221ENST00000506981 USP26Q9BXU7 913 aa22.47■■□□□ 1.19
LMNA-221ENST00000506981 EXOSC10Q01780 885 aaKnown RBP22.46■■□□□ 1.19
LMNA-221ENST00000506981 COL9A3Q14050 684 aaPredicted RBP22.46■■□□□ 1.19
LMNA-221ENST00000506981 ZNF467Q7Z7K2 595 aaPredicted RBP22.46■■□□□ 1.19
LMNA-221ENST00000506981 SGMS1Q86VZ5 419 aa22.46■■□□□ 1.19
LMNA-221ENST00000506981 CNPY2Q9Y2B0 182 aa22.46■■□□□ 1.19
LMNA-221ENST00000506981 LRRC37A2A6NM11 1700 aa22.45■■□□□ 1.19
LMNA-221ENST00000506981 PTPDC1A2A3K4 754 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 NFIBO00712 420 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 MSCO60682 206 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 CYBAP13498 195 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 TRAF1Q13077 416 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 MICU3Q86XE3 530 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 HOMER1Q86YM7 354 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 SHISA4Q96DD7 197 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 LZTS2Q9BRK4 669 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 AMNQ9BXJ7 453 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 CYP39A1Q9NYL5 469 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 NRBP1Q9UHY1 535 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 SYNGAP1Q96PV0 1343 aa22.45■■□□□ 1.18
LMNA-221ENST00000506981 ZBTB5O15062 677 aa22.44■■□□□ 1.18
LMNA-221ENST00000506981 IGHA2P01877 340 aa22.44■■□□□ 1.18
LMNA-221ENST00000506981 CASTP20810 708 aaKnown RBP22.44■■□□□ 1.18
LMNA-221ENST00000506981 RNF207Q6ZRF8 634 aa22.44■■□□□ 1.18
LMNA-221ENST00000506981 FAM133AQ8N9E0 248 aa22.44■■□□□ 1.18
LMNA-221ENST00000506981 RIOX1Q9H6W3 641 aa22.44■■□□□ 1.18
LMNA-221ENST00000506981 MRPL11Q9Y3B7 192 aaKnown RBP22.44■■□□□ 1.18
LMNA-221ENST00000506981 RXRAP19793 462 aa22.43■■□□□ 1.18
LMNA-221ENST00000506981 CNTN2Q02246 1040 aa22.43■■□□□ 1.18
LMNA-221ENST00000506981 BAATQ14032 418 aaPredicted RBP22.43■■□□□ 1.18
LMNA-221ENST00000506981 CCDC144CPQ8IYA2 1237 aa22.43■■□□□ 1.18
LMNA-221ENST00000506981 CLEC4DQ8WXI8 215 aa22.43■■□□□ 1.18
LMNA-221ENST00000506981 CRISPLD2Q9H0B8 497 aa22.43■■□□□ 1.18
LMNA-221ENST00000506981 ADD3Q9UEY8 706 aaKnown RBP22.43■■□□□ 1.18
LMNA-221ENST00000506981 DDX20Q9UHI6 824 aaKnown RBP22.43■■□□□ 1.18
LMNA-221ENST00000506981 NAP1L2Q9ULW6 460 aaPredicted RBP22.43■■□□□ 1.18
LMNA-221ENST00000506981 ASB14A6NK59 587 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 ZBTB43O43298 467 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 FARP2O94887 1054 aaPredicted RBP22.42■■□□□ 1.18
LMNA-221ENST00000506981 CPA1P15085 419 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 RPS6KB1P23443 525 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 PRAMEF19Q5SWL8 479 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 APOA5Q6Q788 366 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 MAMDC4Q6UXC1 1216 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 MCF2L2Q86YR7 1114 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 RAB11FIP4Q86YS3 637 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 TRPV1Q8NER1 839 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 MTMR8Q96EF0 704 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 PIGSQ96S52 555 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 SPZ1Q9BXG8 430 aa22.42■■□□□ 1.18
LMNA-221ENST00000506981 SEC63Q9UGP8 760 aaKnown RBP22.42■■□□□ 1.18
LMNA-221ENST00000506981 PDE4DIPQ5VU43 2346 aa22.41■■□□□ 1.18
LMNA-221ENST00000506981 KLF18A0A0U1RQI7 1052 aa22.41■■□□□ 1.18
LMNA-221ENST00000506981 SEPT4O43236 478 aa22.41■■□□□ 1.18
LMNA-221ENST00000506981 CALML3P27482 149 aa22.41■■□□□ 1.18
LMNA-221ENST00000506981 SMARCA1P28370 1054 aa22.41■■□□□ 1.18
LMNA-221ENST00000506981 Q6ZUG5 572 aa22.41■■□□□ 1.18
LMNA-221ENST00000506981 ARMCX2Q7L311 632 aa22.41■■□□□ 1.18
LMNA-221ENST00000506981 ANKLE1Q8NAG6 615 aa22.41■■□□□ 1.18
LMNA-221ENST00000506981 FANCBQ8NB91 859 aa22.41■■□□□ 1.18
LMNA-221ENST00000506981 RRP36Q96EU6 259 aaKnown RBP22.41■■□□□ 1.18
LMNA-221ENST00000506981 MPHOSPH6Q99547 160 aaKnown RBP22.41■■□□□ 1.18
LMNA-221ENST00000506981 MAF1Q9H063 256 aa22.41■■□□□ 1.18
LMNA-221ENST00000506981 RBM28Q9NW13 759 aaKnown RBP22.41■■□□□ 1.18
LMNA-221ENST00000506981 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.41■■□□□ 1.18
LMNA-221ENST00000506981 PNMA6FA0A0J9YX94 578 aa22.4■■□□□ 1.18
LMNA-221ENST00000506981 CYTH3O43739 400 aa22.4■■□□□ 1.18
LMNA-221ENST00000506981 SLC30A10Q6XR72 485 aa22.4■■□□□ 1.18
LMNA-221ENST00000506981 RGS22Q8NE09 1264 aa22.4■■□□□ 1.18
LMNA-221ENST00000506981 PIBF1Q8WXW3 757 aa22.4■■□□□ 1.18
LMNA-221ENST00000506981 FGD4Q96M96 766 aa22.4■■□□□ 1.18
LMNA-221ENST00000506981 ZHX1Q9UKY1 873 aaPredicted RBP22.4■■□□□ 1.18
LMNA-221ENST00000506981 PCDHA1Q9Y5I3 950 aa22.4■■□□□ 1.18
LMNA-221ENST00000506981 CYP46A1Q9Y6A2 500 aa22.4■■□□□ 1.18
LMNA-221ENST00000506981 SOWAHBA6NEL2 793 aa22.39■■□□□ 1.17
LMNA-221ENST00000506981 GOLGA8AA7E2F4 631 aa22.39■■□□□ 1.17
LMNA-221ENST00000506981 GOLGA8BA8MQT2 603 aa22.39■■□□□ 1.17
LMNA-221ENST00000506981 PLEKHA8P1O95397 391 aa22.39■■□□□ 1.17
LMNA-221ENST00000506981 RPS6P62753 249 aaKnown RBP22.39■■□□□ 1.17
LMNA-221ENST00000506981 RTN1Q16799 776 aa22.39■■□□□ 1.17
LMNA-221ENST00000506981 RUFY3Q7L099 469 aa22.39■■□□□ 1.17
LMNA-221ENST00000506981 BRF1Q92994 677 aa22.39■■□□□ 1.17
LMNA-221ENST00000506981 ABHD16BQ9H3Z7 469 aa22.39■■□□□ 1.17
LMNA-221ENST00000506981 OGDHLQ9ULD0 1010 aa22.39■■□□□ 1.17
LMNA-221ENST00000506981 KIAA1217Q5T5P2 1943 aa22.39■■□□□ 1.17
LMNA-221ENST00000506981 LOC102724159A0A0B4J2E5 919 aa22.38■■□□□ 1.17
LMNA-221ENST00000506981 B4DLN1 442 aa22.38■■□□□ 1.17
LMNA-221ENST00000506981 SNAI1O95863 264 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms