RNA–Protein interactions for RNA: ENST00000506962.3

CCDC110-205, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 2

Gene CCDC110, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-205ENST00000506962 ZBED3Q96IU2 234 aaPredicted RBP7.54□□□□□ -1.2
CCDC110-205ENST00000506962 SPOCK3Q9BQ16 436 aa7.54□□□□□ -1.2
CCDC110-205ENST00000506962 IDI2Q9BXS1 227 aa7.54□□□□□ -1.2
CCDC110-205ENST00000506962 ZNF287Q9HBT7 754 aa7.54□□□□□ -1.2
CCDC110-205ENST00000506962 PIH1D3Q9NQM4 214 aaKnown RBP7.54□□□□□ -1.2
CCDC110-205ENST00000506962 USP40Q9NVE5 1235 aa7.54□□□□□ -1.2
CCDC110-205ENST00000506962 ZDHHC3Q9NYG2 299 aa7.54□□□□□ -1.2
CCDC110-205ENST00000506962 SCHIP1Q9P0W5 487 aaPredicted RBP7.54□□□□□ -1.2
CCDC110-205ENST00000506962 KIAA1024Q9UPX6 916 aa7.54□□□□□ -1.2
CCDC110-205ENST00000506962 DAGLAQ9Y4D2 1042 aa7.54□□□□□ -1.2
CCDC110-205ENST00000506962 TIAM2Q8IVF5 1701 aa7.54□□□□□ -1.2
CCDC110-205ENST00000506962 SCN4AP35499 1836 aa7.54□□□□□ -1.2
CCDC110-205ENST00000506962 COL4A5P29400 1685 aa7.54□□□□□ -1.2
CCDC110-205ENST00000506962 ZNF532Q9HCE3 1301 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 KRBA1A5PL33 1030 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 CDC45O75419 566 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 SLC3A2P08195 630 aaKnown RBP7.53□□□□□ -1.2
CCDC110-205ENST00000506962 EPXP11678 715 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 SDSP20132 328 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 COL8A1P27658 744 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 NOS2P35228 1153 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 BTDP43251 543 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 USP5P45974 858 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 RGS3P49796 1198 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 FKBP1BP68106 108 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 TBC1D10BQ4KMP7 808 aaPredicted RBP7.53□□□□□ -1.2
CCDC110-205ENST00000506962 DCAF15Q66K64 600 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 PHLDB3Q6NSJ2 640 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 APOBEC3HQ6NTF7 200 aaKnown RBP7.53□□□□□ -1.2
CCDC110-205ENST00000506962 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 SLCO4C1Q6ZQN7 724 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 KIAA1211Q6ZU35 1233 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 SLC17A8Q8NDX2 589 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 OTUD7AQ8TE49 926 aaPredicted RBP7.53□□□□□ -1.2
CCDC110-205ENST00000506962 FAM151AQ8WW52 585 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 PRMT6Q96LA8 375 aaPredicted RBP7.53□□□□□ -1.2
CCDC110-205ENST00000506962 ANTXR1Q9H6X2 564 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 ZNF70Q9UC06 446 aaPredicted RBP7.53□□□□□ -1.2
CCDC110-205ENST00000506962 CTNNA3Q9UI47 895 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 PRR12Q9ULL5 1215 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 JAG2Q9Y219 1238 aa7.53□□□□□ -1.2
CCDC110-205ENST00000506962 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 TCRBV5S4A2TA0A5A2 114 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 RASSF10A6NK89 507 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 PPP1R12BO60237 982 aaPredicted RBP7.52□□□□□ -1.21
CCDC110-205ENST00000506962 HLA-DOAP06340 250 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 ARAFP10398 606 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 PCP11498 1178 aaKnown RBP7.52□□□□□ -1.21
CCDC110-205ENST00000506962 HOXB4P17483 251 aaPredicted RBP7.52□□□□□ -1.21
CCDC110-205ENST00000506962 ZMYM1Q5SVZ6 1142 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 ANGEL2Q5VTE6 544 aaKnown RBP7.52□□□□□ -1.21
CCDC110-205ENST00000506962 CDC42EP5Q6NZY7 148 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 LINC00114Q6XXX2 140 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 DNAJC14Q6Y2X3 702 aaPredicted RBP7.52□□□□□ -1.21
CCDC110-205ENST00000506962 KRT26Q7Z3Y9 468 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 FOXP4Q8IVH2 680 aaPredicted RBP7.52□□□□□ -1.21
CCDC110-205ENST00000506962 TEX11Q8IYF3 940 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 MXD3Q9BW11 206 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 NEUROD4Q9HD90 331 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 IGSF5Q9NSI5 407 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 GINM1Q9NU53 330 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 HERC5Q9UII4 1024 aaKnown RBP7.52□□□□□ -1.21
CCDC110-205ENST00000506962 HCN4Q9Y3Q4 1203 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 PSME4Q14997 1843 aa7.52□□□□□ -1.21
CCDC110-205ENST00000506962 WDR33Q9C0J8 1336 aaKnown RBP7.52□□□□□ -1.21
CCDC110-205ENST00000506962 COL2A1P02458 1487 aaPredicted RBP7.51□□□□□ -1.21
CCDC110-205ENST00000506962 REC8O95072 547 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 CLDN10P78369 228 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 PTK7Q13308 1070 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 DGKZQ13574 1117 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 NBPF9Q3BBW0 867 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 TSHZ3Q63HK5 1081 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 FCHSD1Q86WN1 690 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 RIOK1Q9BRS2 568 aaKnown RBP7.51□□□□□ -1.21
CCDC110-205ENST00000506962 DEFB129Q9H1M3 183 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 TDRD3Q9H7E2 651 aaKnown RBP7.51□□□□□ -1.21
CCDC110-205ENST00000506962 VEZTQ9HBM0 779 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 AATFQ9NY61 560 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCDC110-205ENST00000506962 GGA3Q9NZ52 723 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 MARK1Q9P0L2 795 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 PI4KBQ9UBF8 816 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 ARPP21Q9UBL0 812 aaPredicted RBP7.51□□□□□ -1.21
CCDC110-205ENST00000506962 ZMYM6O95789 1325 aa7.51□□□□□ -1.21
CCDC110-205ENST00000506962 SOWAHDA6NJG2 315 aa7.5□□□□□ -1.21
CCDC110-205ENST00000506962 GPAA1O43292 621 aa7.5□□□□□ -1.21
CCDC110-205ENST00000506962 MBD4O95243 580 aa7.5□□□□□ -1.21
CCDC110-205ENST00000506962 APPP05067 770 aa7.5□□□□□ -1.21
CCDC110-205ENST00000506962 GSPT1P15170 499 aaKnown RBP7.5□□□□□ -1.21
CCDC110-205ENST00000506962 ADH6P28332 368 aa7.5□□□□□ -1.21
CCDC110-205ENST00000506962 HIRAP54198 1017 aaPredicted RBP7.5□□□□□ -1.21
CCDC110-205ENST00000506962 EPHA4P54764 986 aa7.5□□□□□ -1.21
CCDC110-205ENST00000506962 RHBDL3P58872 404 aa7.5□□□□□ -1.21
CCDC110-205ENST00000506962 RASA3Q14644 834 aa7.5□□□□□ -1.21
CCDC110-205ENST00000506962 TEAD4Q15561 434 aa7.5□□□□□ -1.21
CCDC110-205ENST00000506962 ALX1Q15699 326 aa7.5□□□□□ -1.21
CCDC110-205ENST00000506962 SBK1Q52WX2 424 aa7.5□□□□□ -1.21
CCDC110-205ENST00000506962 CRTC2Q53ET0 693 aaPredicted RBP7.5□□□□□ -1.21
CCDC110-205ENST00000506962 CWC27Q6UX04 472 aaKnown RBP7.5□□□□□ -1.21
CCDC110-205ENST00000506962 CHSY3Q70JA7 882 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms