RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 TNFAIP2Q03169 654 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 PPARAQ07869 468 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 GRIN2CQ14957 1233 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 TSHZ3Q63HK5 1081 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 PSRC1Q6PGN9 363 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 SLC43A3Q8NBI5 491 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 TIFAQ96CG3 184 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 RNF146Q9NTX7 359 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 GNEQ9Y223 722 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 Q9Y3F1 56 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 NCOR1O75376 2440 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 MUC3AQ02505 3323 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 ZEB2O60315 1214 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 CSF2RAP15509 400 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 MX1P20591 662 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 IRX5P78411 483 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 CNTN2Q02246 1040 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 ZMYM1Q5SVZ6 1142 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 IQSEC1Q6DN90 963 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 RCSD1Q6JBY9 416 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 SKAP1Q86WV1 359 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 PI4K2BQ8TCG2 481 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 TRERF1Q96PN7 1200 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 HOMER2Q9NSB8 354 aa13.39□□□□□ -0.27
CCHCR1-220ENST00000506831 LOC102724159A0A0B4J2E5 919 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 SOWAHBA6NEL2 793 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 MCCP23508 829 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 NOVP48745 357 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 PWP2Q15269 919 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 ZNF365Q70YC5 407 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 PLEKHM2Q8IWE5 1019 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 HERVK_113Q902F9 699 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 SEC62Q99442 399 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 FSD1Q9BTV5 496 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 PBX4Q9BYU1 374 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 MTIF3Q9H2K0 278 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 IL23AQ9NPF7 189 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 ASTN1O14525 1302 aa13.38□□□□□ -0.27
CCHCR1-220ENST00000506831 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 TSPY2A6NKD2 308 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 ALAS1P13196 640 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 PDE1AP54750 535 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 IKQ13123 557 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 ITGA7Q13683 1181 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 RAB30Q15771 203 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 FSCN1Q16658 493 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 AKNAD1Q5T1N1 836 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 CXCL17Q6UXB2 119 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 NOL8Q76FK4 1167 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 TLK2Q86UE8 772 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 MORC4Q8TE76 937 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 AP5M1Q9H0R1 490 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 IL17RBQ9NRM6 502 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 CYP39A1Q9NYL5 469 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 ANAPC4Q9UJX5 808 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 PRR12Q9ULL5 1215 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 STX8Q9UNK0 236 aa13.37□□□□□ -0.27
CCHCR1-220ENST00000506831 FGRP09769 529 aa13.36□□□□□ -0.27
CCHCR1-220ENST00000506831 SMPD1P17405 629 aa13.36□□□□□ -0.27
CCHCR1-220ENST00000506831 BEX3Q00994 111 aa13.36□□□□□ -0.27
CCHCR1-220ENST00000506831 TJAP1Q5JTD0 557 aa13.36□□□□□ -0.27
CCHCR1-220ENST00000506831 TAPT1Q6NXT6 567 aa13.36□□□□□ -0.27
CCHCR1-220ENST00000506831 TICAM2Q86XR7 235 aa13.36□□□□□ -0.27
CCHCR1-220ENST00000506831 GAS2L1Q99501 681 aaPredicted RBP13.36□□□□□ -0.27
CCHCR1-220ENST00000506831 PPP1R12CQ9BZL4 782 aa13.36□□□□□ -0.27
CCHCR1-220ENST00000506831 HIPK3Q9H422 1215 aa13.36□□□□□ -0.27
CCHCR1-220ENST00000506831 VTA1Q9NP79 307 aa13.36□□□□□ -0.27
CCHCR1-220ENST00000506831 ISY1Q9ULR0 285 aaKnown RBP13.36□□□□□ -0.27
CCHCR1-220ENST00000506831 DYNC1LI2O43237 492 aaPredicted RBP13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 ORC4O43929 436 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 FGBP02675 491 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 ICAM1P05362 532 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 CYP2C18P33260 490 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 ALX1Q15699 326 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 BTNL9Q6UXG8 535 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 KCTD1Q719H9 257 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 RPUSD2Q8IZ73 545 aaKnown RBP13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 DCAF4Q8WV16 495 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 PRDM6Q9NQX0 595 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 ADD3Q9UEY8 706 aaKnown RBP13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 MSRAQ9UJ68 235 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 PNMA2Q9UL42 364 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 GRIN2DO15399 1336 aa13.35□□□□□ -0.27
CCHCR1-220ENST00000506831 GRXCR1A8MXD5 290 aa13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 FOXP2O15409 715 aa13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 ACRP10323 421 aa13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 PBX2P40425 430 aa13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 DUSP28Q4G0W2 176 aa13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 MUM1L1Q5H9M0 696 aa13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 USP38Q8NB14 1042 aa13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 ATXN2LQ8WWM7 1075 aaKnown RBP13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 NOC4LQ9BVI4 516 aaKnown RBP13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 RANBP17Q9H2T7 1088 aaKnown RBP13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 OSBPL3Q9H4L5 887 aa13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 PDGFCQ9NRA1 345 aa13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 TCP11L1Q9NUJ3 509 aa13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 CCPG1Q9ULG6 757 aa13.34□□□□□ -0.27
CCHCR1-220ENST00000506831 LRRC37A2A6NM11 1700 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms