RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 WDR19Q8NEZ3 1342 aa20.8■□□□□ 0.92
SMN1-204ENST00000506163 SOWAHBA6NEL2 793 aa20.79■□□□□ 0.92
SMN1-204ENST00000506163 PPP1R11O60927 126 aaPredicted RBP20.79■□□□□ 0.92
SMN1-204ENST00000506163 MNX1P50219 401 aaPredicted RBP20.79■□□□□ 0.92
SMN1-204ENST00000506163 RAB11FIP4Q86YS3 637 aa20.79■□□□□ 0.92
SMN1-204ENST00000506163 NUP133Q8WUM0 1156 aa20.79■□□□□ 0.92
SMN1-204ENST00000506163 DDX49Q9Y6V7 483 aaKnown RBP20.79■□□□□ 0.92
SMN1-204ENST00000506163 SNAI1O95863 264 aaPredicted RBP20.78■□□□□ 0.92
SMN1-204ENST00000506163 TFRCP02786 760 aaKnown RBP20.78■□□□□ 0.92
SMN1-204ENST00000506163 RXRAP19793 462 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 KRT32Q14532 448 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 USH1GQ495M9 461 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 MAMDC4Q6UXC1 1216 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 NSMFQ6X4W1 530 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 RIOX1Q9H6W3 641 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 BRPF3Q9ULD4 1205 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 LCTP09848 1927 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 MCM3APO60318 1980 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 BAATQ14032 418 aaPredicted RBP20.78■□□□□ 0.92
SMN1-204ENST00000506163 NFXL1Q6ZNB6 911 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 SGMS1Q86VZ5 419 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 TMTC2Q8N394 836 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 TBC1D5Q92609 795 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 JAKMIP1Q96N16 626 aaKnown RBP20.78■□□□□ 0.92
SMN1-204ENST00000506163 OGDHLQ9ULD0 1010 aa20.78■□□□□ 0.92
SMN1-204ENST00000506163 PDE4DIPQ5VU43 2346 aa20.77■□□□□ 0.92
SMN1-204ENST00000506163 POTEB2H3BUK9 544 aa20.77■□□□□ 0.91
SMN1-204ENST00000506163 EPB41L2O43491 1005 aaKnown RBP20.77■□□□□ 0.91
SMN1-204ENST00000506163 DHX16O60231 1041 aaKnown RBP20.77■□□□□ 0.91
SMN1-204ENST00000506163 DDAH1O94760 285 aa20.77■□□□□ 0.91
SMN1-204ENST00000506163 ZNF865P0CJ78 1059 aaPredicted RBP20.77■□□□□ 0.91
SMN1-204ENST00000506163 ZNF467Q7Z7K2 595 aaPredicted RBP20.77■□□□□ 0.91
SMN1-204ENST00000506163 PIGSQ96S52 555 aa20.77■□□□□ 0.91
SMN1-204ENST00000506163 MAP3K14Q99558 947 aa20.77■□□□□ 0.91
SMN1-204ENST00000506163 CCDC69A6NI79 296 aa20.76■□□□□ 0.91
SMN1-204ENST00000506163 CNGA1P29973 690 aa20.76■□□□□ 0.91
SMN1-204ENST00000506163 ANO1Q5XXA6 986 aa20.76■□□□□ 0.91
SMN1-204ENST00000506163 SLC30A10Q6XR72 485 aa20.76■□□□□ 0.91
SMN1-204ENST00000506163 CCDC144CPQ8IYA2 1237 aa20.76■□□□□ 0.91
SMN1-204ENST00000506163 DIS3LQ8TF46 1054 aaKnown RBP20.76■□□□□ 0.91
SMN1-204ENST00000506163 DDX20Q9UHI6 824 aaKnown RBP20.76■□□□□ 0.91
SMN1-204ENST00000506163 PFASO15067 1338 aa20.75■□□□□ 0.91
SMN1-204ENST00000506163 PLEKHA8P1O95397 391 aa20.75■□□□□ 0.91
SMN1-204ENST00000506163 SEC24BO95487 1268 aa20.75■□□□□ 0.91
SMN1-204ENST00000506163 FBXO11Q86XK2 927 aa20.75■□□□□ 0.91
SMN1-204ENST00000506163 CMTR1Q8N1G2 835 aaKnown RBP20.75■□□□□ 0.91
SMN1-204ENST00000506163 SRBD1Q8N5C6 995 aaKnown RBP20.75■□□□□ 0.91
SMN1-204ENST00000506163 KATNBL1Q9H079 304 aa20.75■□□□□ 0.91
SMN1-204ENST00000506163 MYH6P13533 1939 aa20.74■□□□□ 0.91
SMN1-204ENST00000506163 SYNGAP1Q96PV0 1343 aa20.74■□□□□ 0.91
SMN1-204ENST00000506163 OPLAHO14841 1288 aa20.74■□□□□ 0.91
SMN1-204ENST00000506163 ZBTB5O15062 677 aa20.74■□□□□ 0.91
SMN1-204ENST00000506163 RPS6P62753 249 aaKnown RBP20.74■□□□□ 0.91
SMN1-204ENST00000506163 APOA5Q6Q788 366 aa20.74■□□□□ 0.91
SMN1-204ENST00000506163 ARMCX2Q7L311 632 aa20.74■□□□□ 0.91
SMN1-204ENST00000506163 MSL3Q8N5Y2 521 aaKnown RBP20.74■□□□□ 0.91
SMN1-204ENST00000506163 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.74■□□□□ 0.91
SMN1-204ENST00000506163 PNMA2Q9UL42 364 aa20.74■□□□□ 0.91
SMN1-204ENST00000506163 SLC12A7Q9Y666 1083 aa20.74■□□□□ 0.91
SMN1-204ENST00000506163 SEPT4O43236 478 aa20.73■□□□□ 0.91
SMN1-204ENST00000506163 FARP2O94887 1054 aaPredicted RBP20.73■□□□□ 0.91
SMN1-204ENST00000506163 HMGB1P09429 215 aaKnown RBP20.73■□□□□ 0.91
SMN1-204ENST00000506163 HOMER1Q86YM7 354 aa20.73■□□□□ 0.91
SMN1-204ENST00000506163 FANCBQ8NB91 859 aa20.73■□□□□ 0.91
SMN1-204ENST00000506163 CTCFLQ8NI51 663 aaPredicted RBP20.73■□□□□ 0.91
SMN1-204ENST00000506163 PIBF1Q8WXW3 757 aa20.73■□□□□ 0.91
SMN1-204ENST00000506163 NRBP1Q9UHY1 535 aa20.73■□□□□ 0.91
SMN1-204ENST00000506163 ABCB11O95342 1321 aa20.72■□□□□ 0.91
SMN1-204ENST00000506163 PTPDC1A2A3K4 754 aa20.72■□□□□ 0.91
SMN1-204ENST00000506163 RPS6KB1P23443 525 aa20.72■□□□□ 0.91
SMN1-204ENST00000506163 BLOC1S2Q6QNY1 142 aa20.72■□□□□ 0.91
SMN1-204ENST00000506163 RNF207Q6ZRF8 634 aa20.72■□□□□ 0.91
SMN1-204ENST00000506163 Q6ZUG5 572 aa20.72■□□□□ 0.91
SMN1-204ENST00000506163 MICU3Q86XE3 530 aa20.72■□□□□ 0.91
SMN1-204ENST00000506163 LENG1Q96BZ8 264 aaPredicted RBP20.72■□□□□ 0.91
SMN1-204ENST00000506163 PAWRQ96IZ0 340 aaKnown RBP20.72■□□□□ 0.91
SMN1-204ENST00000506163 AMNQ9BXJ7 453 aa20.72■□□□□ 0.91
SMN1-204ENST00000506163 FAM217BQ9NTX9 383 aaPredicted RBP20.72■□□□□ 0.91
SMN1-204ENST00000506163 ADCY6O43306 1168 aa20.71■□□□□ 0.91
SMN1-204ENST00000506163 CASTP20810 708 aaKnown RBP20.71■□□□□ 0.91
SMN1-204ENST00000506163 CALML3P27482 149 aa20.71■□□□□ 0.91
SMN1-204ENST00000506163 KIF5BP33176 963 aa20.71■□□□□ 0.91
SMN1-204ENST00000506163 RGS22Q8NE09 1264 aa20.71■□□□□ 0.91
SMN1-204ENST00000506163 SPZ1Q9BXG8 430 aa20.71■□□□□ 0.91
SMN1-204ENST00000506163 ZSWIM6Q9HCJ5 1215 aa20.71■□□□□ 0.91
SMN1-204ENST00000506163 COL20A1Q9P218 1284 aa20.71■□□□□ 0.91
SMN1-204ENST00000506163 CNPY2Q9Y2B0 182 aa20.71■□□□□ 0.91
SMN1-204ENST00000506163 PCDHA1Q9Y5I3 950 aa20.71■□□□□ 0.91
SMN1-204ENST00000506163 FRMPD3Q5JV73 1810 aa20.71■□□□□ 0.91
SMN1-204ENST00000506163 PNMA6FA0A0J9YX94 578 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 SMARCA1P28370 1054 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 ACVR2BQ13705 512 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 MORC4Q8TE76 937 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 AGXT2Q9BYV1 514 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 MRPL11Q9Y3B7 192 aaKnown RBP20.7■□□□□ 0.9
SMN1-204ENST00000506163 KLF18A0A0U1RQI7 1052 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 MSCO60682 206 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 CALM1P0DP23 149 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 CALM2P0DP24 149 aa20.7■□□□□ 0.9
SMN1-204ENST00000506163 CALM3P0DP25 149 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms