RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 LAD1O00515 517 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 MYL1P05976 194 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 OR52Z1P0C646 297 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 RFC4P35249 363 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 TXKP42681 527 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 CDK8P49336 464 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 DNM2P50570 870 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 FAM193AP78312 1265 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 NONOQ15233 471 aaKnown RBP eCLIP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 WHAMMP3Q1A5X7 153 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 BEND6Q5SZJ8 279 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 ZNF804AQ7Z570 1209 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 DAGLBQ8NCG7 672 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 NEK11Q8NG66 645 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 DUSP9Q99956 384 aaKnown RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 UBA5Q9GZZ9 404 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 C6orf50Q9HD87 102 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 SEC63Q9UGP8 760 aaKnown RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 CCNL1Q9UK58 526 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 CASZ1Q86V15 1759 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 COL5A3P25940 1745 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 LAMB1P07942 1786 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 A0A1W2PQC6 194 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 SRGAP2O75044 1071 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 ERLIN1O75477 346 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 LDHCP07864 332 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 PRPHP41219 470 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 BTDP43251 543 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 MTIF2P46199 727 aaKnown RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 VSNL1P62760 191 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 RC3H1Q5TC82 1133 aaKnown RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 SOGA3Q5TF21 947 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 TMED8Q6PL24 325 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 HDXQ7Z353 690 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 KIAA1328Q86T90 577 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 TBCKQ8TEA7 893 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 P2RX5Q93086 422 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 CCDC47Q96A33 483 aaKnown RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 RRP36Q96EU6 259 aaKnown RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 DHTKD1Q96HY7 919 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 PIGSQ96S52 555 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 LZTS2Q9BRK4 669 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 TRIM9Q9C026 710 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 ZNF287Q9HBT7 754 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 PDE11AQ9HCR9 933 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 RNF216Q9NWF9 866 aaPredicted RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 ZNHIT6Q9NWK9 470 aaKnown RBP8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 LEMD3Q9Y2U8 911 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 FLT1P17948 1338 aa8.53□□□□□ -1.04
PPARGC1A-204ENST00000506055 H3BQF6 201 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 POTEB2H3BUK9 544 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 NKRFO15226 690 aaKnown RBP eCLIP8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 SRGNP10124 158 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 GNA11P29992 359 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 PPP4CP60510 307 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 HERVK_113P62684 666 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 GRAPQ13588 217 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 TAF3Q5VWG9 929 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 KRT25Q7Z3Z0 450 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 NEK8Q86SG6 692 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 TEX11Q8IYF3 940 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 MSANTD4Q8NCY6 345 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 GRAPLQ8TC17 118 aaPredicted RBP8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 HNRNPLLQ8WVV9 542 aaKnown RBP8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 CEP95Q96GE4 821 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 CAPZA3Q96KX2 299 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 CNOT6LQ96LI5 555 aaKnown RBP8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 AK8Q96MA6 479 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 C8orf37Q96NL8 207 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 NOC4LQ9BVI4 516 aaKnown RBP8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 RTFDC1Q9BY42 306 aaPredicted RBP8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 HAUS4Q9H6D7 363 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 NHEJ1Q9H9Q4 299 aaPredicted RBP8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 SLC39A2Q9NP94 309 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 TMEM260Q9NX78 707 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 RAB21Q9UL25 225 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 DUSP10Q9Y6W6 482 aa8.52□□□□□ -1.04
PPARGC1A-204ENST00000506055 CCDC88AQ3V6T2 1871 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 BICDL2A1A5D9 508 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 USP17L5A8MUK1 530 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 MAP2K7O14733 419 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 ATP1A1P05023 1023 aaKnown RBP8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 ERCC3P19447 782 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 TUBB4BP68371 445 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 KRT83P78385 493 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 AMPD2Q01433 879 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 CYP27A1Q02318 531 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 NGLY1Q96IV0 654 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 SPZ1Q9BXG8 430 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 ADAM21Q9UKJ8 722 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 ROBO3Q96MS0 1386 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 FRMPD2Q68DX3 1309 aaPredicted RBP8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 NRAPQ86VF7 1730 aa8.52□□□□□ -1.05
PPARGC1A-204ENST00000506055 RCCD1A6NED2 376 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 RASSF10A6NK89 507 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 N4BP1O75113 896 aaKnown RBP8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 UFL1O94874 794 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 IPO7O95373 1038 aaKnown RBP8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 CCNE1P24864 410 aa8.51□□□□□ -1.05
PPARGC1A-204ENST00000506055 HNRNPH2P55795 449 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms