RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 FAM227BQ96M60 508 aa13.45□□□□□ -0.26
SIL1-208ENST00000505945 PURBQ96QR8 312 aaKnown RBP13.45□□□□□ -0.26
SIL1-208ENST00000505945 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.45□□□□□ -0.26
SIL1-208ENST00000505945 COL25A1Q9BXS0 654 aaPredicted RBP13.45□□□□□ -0.26
SIL1-208ENST00000505945 TOMM22Q9NS69 142 aa13.45□□□□□ -0.26
SIL1-208ENST00000505945 CYP39A1Q9NYL5 469 aa13.45□□□□□ -0.26
SIL1-208ENST00000505945 CDH23Q9H251 3354 aa13.45□□□□□ -0.26
SIL1-208ENST00000505945 A0A0U1RQG5 324 aaPredicted RBP13.44□□□□□ -0.26
SIL1-208ENST00000505945 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.44□□□□□ -0.26
SIL1-208ENST00000505945 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.44□□□□□ -0.26
SIL1-208ENST00000505945 DYNC1LI2O43237 492 aaPredicted RBP13.44□□□□□ -0.26
SIL1-208ENST00000505945 ORC4O43929 436 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 FGAP02671 866 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 FGRP09769 529 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 CSF2RAP15509 400 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 SLC16A2P36021 539 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 NOVP48745 357 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 NKX3-2P78367 333 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 ALX1Q15699 326 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 RRP12Q5JTH9 1297 aaKnown RBP13.44□□□□□ -0.26
SIL1-208ENST00000505945 TMEM63BQ5T3F8 832 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 NSMFQ6X4W1 530 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 C16orf59Q7L2K0 433 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 FAM126BQ8IXS8 530 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 MAFAQ8NHW3 353 aaPredicted RBP13.44□□□□□ -0.26
SIL1-208ENST00000505945 PDGFCQ9NRA1 345 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 HELLSQ9NRZ9 838 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 CCPG1Q9ULG6 757 aa13.44□□□□□ -0.26
SIL1-208ENST00000505945 GNEQ9Y223 722 aaKnown RBP13.44□□□□□ -0.26
SIL1-208ENST00000505945 A0A0D9SFI3 127 aa13.43□□□□□ -0.26
SIL1-208ENST00000505945 ICAM1P05362 532 aa13.43□□□□□ -0.26
SIL1-208ENST00000505945 SMPD1P17405 629 aa13.43□□□□□ -0.26
SIL1-208ENST00000505945 MCMDC2Q4G0Z9 681 aa13.43□□□□□ -0.26
SIL1-208ENST00000505945 TAPT1Q6NXT6 567 aa13.43□□□□□ -0.26
SIL1-208ENST00000505945 TLK2Q86UE8 772 aa13.43□□□□□ -0.26
SIL1-208ENST00000505945 DCAF4Q8WV16 495 aa13.43□□□□□ -0.26
SIL1-208ENST00000505945 PPP1R12CQ9BZL4 782 aa13.43□□□□□ -0.26
SIL1-208ENST00000505945 AP5M1Q9H0R1 490 aa13.43□□□□□ -0.26
SIL1-208ENST00000505945 EYSQ5T1H1 3165 aa13.43□□□□□ -0.26
SIL1-208ENST00000505945 FRMPD2Q68DX3 1309 aaPredicted RBP13.42□□□□□ -0.26
SIL1-208ENST00000505945 TLR3O15455 904 aaKnown RBP13.42□□□□□ -0.26
SIL1-208ENST00000505945 CD4P01730 458 aa13.42□□□□□ -0.26
SIL1-208ENST00000505945 ACRP10323 421 aa13.42□□□□□ -0.26
SIL1-208ENST00000505945 HSPD1P10809 573 aaKnown RBP13.42□□□□□ -0.26
SIL1-208ENST00000505945 TOP1P11387 765 aaKnown RBP13.42□□□□□ -0.26
SIL1-208ENST00000505945 FOSL2P15408 326 aa13.42□□□□□ -0.26
SIL1-208ENST00000505945 DNAJB2P25686 324 aa13.42□□□□□ -0.26
SIL1-208ENST00000505945 CYP2C18P33260 490 aa13.42□□□□□ -0.26
SIL1-208ENST00000505945 PPIGQ13427 754 aaKnown RBP eCLIP13.42□□□□□ -0.261e-6■■□□□ 14
SIL1-208ENST00000505945 HDAC1Q13547 482 aaPredicted RBP13.42□□□□□ -0.26
SIL1-208ENST00000505945 BAATQ14032 418 aaPredicted RBP13.42□□□□□ -0.26
SIL1-208ENST00000505945 GRIN2CQ14957 1233 aa13.42□□□□□ -0.26
SIL1-208ENST00000505945 FSCN1Q16658 493 aaKnown RBP13.42□□□□□ -0.26
SIL1-208ENST00000505945 TMEM240Q5SV17 173 aa13.42□□□□□ -0.26
SIL1-208ENST00000505945 IQSEC1Q6DN90 963 aa13.42□□□□□ -0.26
SIL1-208ENST00000505945 FBXO16Q8IX29 292 aaPredicted RBP13.42□□□□□ -0.26
SIL1-208ENST00000505945 TMEM199Q8N511 208 aa13.42□□□□□ -0.26
SIL1-208ENST00000505945 TMEM47Q9BQJ4 181 aa13.42□□□□□ -0.26
SIL1-208ENST00000505945 RANBP17Q9H2T7 1088 aaKnown RBP13.42□□□□□ -0.26
SIL1-208ENST00000505945 GPCPD1Q9NPB8 672 aa13.42□□□□□ -0.26
SIL1-208ENST00000505945 GRIN2DO15399 1336 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 TMEM265A0A087WTH1 108 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 GRXCR1A8MXD5 290 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 HAND2P61296 217 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 NMIQ13287 307 aaPredicted RBP13.41□□□□□ -0.26
SIL1-208ENST00000505945 ITGA7Q13683 1181 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 SYDE2Q5VT97 1194 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 BTNL9Q6UXG8 535 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 KIAA1211Q6ZU35 1233 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 ZNF365Q70YC5 407 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 ZNF589Q86UQ0 364 aaPredicted RBP13.41□□□□□ -0.26
SIL1-208ENST00000505945 SLC43A3Q8NBI5 491 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 LNPKQ9C0E8 428 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 PRUNE2Q8WUY3 3088 aa13.41□□□□□ -0.26
SIL1-208ENST00000505945 TRIM6-TRIM34B2RNG4 842 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 NFIBO00712 420 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 CABYRO75952 493 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 PSMC6P62333 389 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 RASIP1Q5U651 963 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 MORC4Q8TE76 937 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 RILPL2Q969X0 211 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 TIFAQ96CG3 184 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 TRPV6Q9H1D0 765 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 ZNF576Q9H609 170 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 VTA1Q9NP79 307 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 TCP11L1Q9NUJ3 509 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 Q9Y3F1 56 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 VCANP13611 3396 aa13.4□□□□□ -0.26
SIL1-208ENST00000505945 MYO9BQ13459 2157 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 UMODL1Q5DID0 1318 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 PTPDC1A2A3K4 754 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 ZEB2O60315 1214 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 PDHBP11177 359 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 PBX2P40425 430 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 MFSD6Q6ZSS7 791 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 CLEC4DQ8WXI8 215 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 HIPK3Q9H422 1215 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 IL23AQ9NPF7 189 aa13.39□□□□□ -0.27
SIL1-208ENST00000505945 ADD3Q9UEY8 706 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms