RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 RC3H2Q9HBD1 1191 aaKnown RBP6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 CLEC1BQ9P126 229 aa6.06□□□□□ -1.44
TOPBP1-204ENST00000505804 DLX3O60479 287 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 TBC1D8O95759 1140 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 CPP00450 1065 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 SCG5P05408 212 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 FGFR1P11362 822 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 PLS3P13797 630 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 L1CAMP32004 1257 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 CEBPAP49715 358 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 C2orf27AQ580R0 203 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 KSR1Q8IVT5 923 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 TMEM145Q8NBT3 493 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 KREMEN2Q8NCW0 462 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 KCTD13Q8WZ19 329 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 CCDC120Q96HB5 630 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 TNFRSF10DQ9UBN6 386 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 CTNND2Q9UQB3 1225 aa6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 MRPL42Q9Y6G3 142 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-204ENST00000505804 FADS2P1A8MWK0 482 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 ARNTLO00327 626 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 USP2O75604 605 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 TRHRP34981 398 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 GDNFP39905 211 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 RTP1P59025 263 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 SQSTM1Q13501 440 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 LONRF2Q1L5Z9 754 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 DENND5AQ6IQ26 1287 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 JAZF1Q86VZ6 243 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 CPNE8Q86YQ8 564 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 SPPL2CQ8IUH8 684 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 SCUBE1Q8IWY4 988 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 OXR1Q8N573 874 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 PDZD8Q8NEN9 1154 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 NPLOC4Q8TAT6 608 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 EXOC2Q96KP1 924 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 C19orf44Q9H6X5 657 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 TMEFF2Q9UIK5 374 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 PTCH2Q9Y6C5 1203 aa6.04□□□□□ -1.44
TOPBP1-204ENST00000505804 TRBV23-1A0A0A0MS06 115 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 NPHP3-ACAD11A0A0J9YXS1 232 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 TLDC2A0PJX2 215 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 BLACEA4D250 179 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 PAMP19021 973 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 KIR2DL1P43626 348 aaPredicted RBP6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 KIR2DL2P43627 348 aaPredicted RBP6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 LAPTM5Q13571 262 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 SLC14A2Q15849 920 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 SLC35F1Q5T1Q4 408 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 HLA-DQA1Q5Y7H0 255 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 CEP128Q6ZU80 1094 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 ANKS4BQ8N8V4 417 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 C1orf159Q96HA4 380 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 IPO9Q96P70 1041 aaKnown RBP6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 SLC26A8Q96RN1 970 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 DHRS4Q9BTZ2 278 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 SP110Q9HB58 689 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 ADGRE2Q9UHX3 823 aa6.03□□□□□ -1.44
TOPBP1-204ENST00000505804 ESYT3A0FGR9 886 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 NOTOA8MTQ0 251 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 HPXP02790 462 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 CHRNEQ04844 493 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 MAP4K2Q12851 820 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 TIGD5Q53EQ6 642 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 CYP2R1Q6VVX0 501 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 CBLL1Q75N03 491 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 JAMLQ86YT9 394 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 CCDC103Q8IW40 242 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 PPIL6Q8IXY8 311 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 ZSWIM2Q8NEG5 633 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 MYLIPQ8WY64 445 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 JMJD8Q96S16 334 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 TBX22Q9Y458 520 aa6.02□□□□□ -1.45
TOPBP1-204ENST00000505804 A0A1W2PQ45 241 aaPredicted RBP6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 A0A1W2PQY0 241 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 FITM1A5D6W6 292 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 MEFVO15553 781 aaPredicted RBP6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 PSPNO60542 156 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 EFEMP2O95967 443 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 KIR3DS1Q14943 382 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 NTRK3Q16288 839 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 INF2Q27J81 1249 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 HSF5Q4G112 596 aaPredicted RBP6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 ZC3H12BQ5HYM0 836 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 FYB2Q5VWT5 728 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 MBLAC2Q68D91 279 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 USP53Q70EK8 1073 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 SLCO6A1Q86UG4 719 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 KISS1RQ969F8 398 aaPredicted RBP6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 MMP19Q99542 508 aa6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 MRPS23Q9Y3D9 190 aaKnown RBP6.01□□□□□ -1.45
TOPBP1-204ENST00000505804 TRBV23OR9-2A0A075B6M9 112 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 C7orf72A4D263 438 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 WTIPA6NIX2 430 aaPredicted RBP6□□□□□ -1.45
TOPBP1-204ENST00000505804 NRDCO43847 1150 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 LCP1P13796 627 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 RAC2P15153 192 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 AFMP43652 599 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 GALK1P51570 392 aa6□□□□□ -1.45
TOPBP1-204ENST00000505804 NR0B2Q15466 257 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms