RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ERCC3P19447 782 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 CDK7P50613 346 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 GSTO1P78417 241 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 DDX10Q13206 875 aaKnown RBP8.62□□□□□ -1.03
VCAN-206ENST00000505615 CCSAPQ6IQ19 270 aaPredicted RBP8.62□□□□□ -1.03
VCAN-206ENST00000505615 CCDC174Q6PII3 467 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 TBC1D9Q6ZT07 1266 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 RNF180Q86T96 592 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 FOXP4Q8IVH2 680 aaPredicted RBP8.62□□□□□ -1.03
VCAN-206ENST00000505615 MAPKAPK5Q8IW41 473 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 NPAS3Q8IXF0 933 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 KLHDC9Q8NEP7 349 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 FEZ1Q99689 392 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 TSEN34Q9BSV6 310 aaKnown RBP8.62□□□□□ -1.03
VCAN-206ENST00000505615 SPATC1LQ9H0A9 340 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 STARD7Q9NQZ5 370 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 HMG20BQ9P0W2 317 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 NXF1Q9UBU9 619 aaKnown RBP8.62□□□□□ -1.03
VCAN-206ENST00000505615 NRBP1Q9UHY1 535 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 PA2G4Q9UQ80 394 aaKnown RBP8.62□□□□□ -1.03
VCAN-206ENST00000505615 TECTAO75443 2155 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 MYH8P13535 1937 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 PTPRSQ13332 1948 aa8.62□□□□□ -1.03
VCAN-206ENST00000505615 MYO7AQ13402 2215 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 SYNRGQ9UMZ2 1314 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 MYADML2A6NDP7 307 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 EPOPA6NHQ4 379 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 PRR33A8MZF0 331 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 RFXAPO00287 272 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 ZNF865P0CJ78 1059 aaPredicted RBP8.61□□□□□ -1.03
VCAN-206ENST00000505615 IL15P40933 162 aaPredicted RBP8.61□□□□□ -1.03
VCAN-206ENST00000505615 ACLYP53396 1101 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 RABGGTBP53611 331 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 USP14P54578 494 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 TIMM10P62072 90 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 SKIV2LQ15477 1246 aaKnown RBP8.61□□□□□ -1.03
VCAN-206ENST00000505615 KRT40Q6A162 431 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 PTCRAQ6ISU1 281 aaPredicted RBP8.61□□□□□ -1.03
VCAN-206ENST00000505615 RETREG3Q86VR2 466 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 ABRAQ8N0Z2 381 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 TGFBRAP1Q8WUH2 860 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 XAGE2Q96GT9 111 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 RPAP3Q9H6T3 665 aaPredicted RBP8.61□□□□□ -1.03
VCAN-206ENST00000505615 IL23AQ9NPF7 189 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 PALD1Q9ULE6 856 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 COG5Q9UP83 839 aa8.61□□□□□ -1.03
VCAN-206ENST00000505615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.61□□□□□ -1.03
VCAN-206ENST00000505615 ZFHX2Q9C0A1 2572 aaPredicted RBP8.6□□□□□ -1.03
VCAN-206ENST00000505615 A0A1B0GUL7 405 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 MOXD2PA6NHM9 499 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 CYP2C18P33260 490 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 GUCY1A2P33402 732 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 PPP2R2DQ66LE6 453 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 TATDN1Q6P1N9 297 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 ADGRA1Q86SQ6 560 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 WDR63Q8IWG1 891 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 FAM126BQ8IXS8 530 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 CRACR2BQ8N4Y2 399 aaPredicted RBP8.6□□□□□ -1.03
VCAN-206ENST00000505615 TMEM199Q8N511 208 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 VWCEQ96DN2 955 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 FBXL18Q96ME1 805 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 PPP1R12CQ9BZL4 782 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 AATFQ9NY61 560 aaKnown RBP eCLIP8.6□□□□□ -1.03
VCAN-206ENST00000505615 NAV1Q8NEY1 1877 aa8.6□□□□□ -1.03
VCAN-206ENST00000505615 ELP1O95163 1332 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 MROH7Q68CQ1 1323 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 AKR1A1P14550 325 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 CST5P28325 142 aaPredicted RBP8.59□□□□□ -1.03
VCAN-206ENST00000505615 ARID4AP29374 1257 aaPredicted RBP8.59□□□□□ -1.03
VCAN-206ENST00000505615 GMPRP36959 345 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 KCNA10Q16322 511 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 CCDC184Q52MB2 194 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 SPATA5Q8NB90 893 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 NUP133Q8WUM0 1156 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 TINF2Q9BSI4 451 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 TRIM34Q9BYJ4 488 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 FAM217BQ9NTX9 383 aaPredicted RBP8.59□□□□□ -1.03
VCAN-206ENST00000505615 SLC5A4Q9NY91 659 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 RAI14Q9P0K7 980 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 SAP30BPQ9UHR5 308 aaKnown RBP8.59□□□□□ -1.03
VCAN-206ENST00000505615 PCDHA11Q9Y5I1 949 aa8.59□□□□□ -1.03
VCAN-206ENST00000505615 UMODL1Q5DID0 1318 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 C5orf42Q9H799 3197 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 ARVCFO00192 962 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 APBB1O00213 710 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 ARHGEF15O94989 841 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 CD4P01730 458 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 FGBP02675 491 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 MCAMP43121 646 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 COG2Q14746 738 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 MVPQ14764 893 aaKnown RBP8.58□□□□□ -1.04
VCAN-206ENST00000505615 RAB3GAP1Q15042 981 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 ZNF792Q3KQV3 632 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 KIAA1755Q5JYT7 1200 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 OTOP2Q7RTS6 562 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 EHBP1Q8NDI1 1231 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 MTIF3Q9H2K0 278 aaKnown RBP8.58□□□□□ -1.04
VCAN-206ENST00000505615 MROH8Q9H579 483 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 GPCPD1Q9NPB8 672 aa8.58□□□□□ -1.04
VCAN-206ENST00000505615 COPRSQ9NQ92 184 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms