RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 DNAJA2O60884 412 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 PMS1P54277 932 aaKnown RBP5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 PPM1JQ5JR12 505 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 ERICH6BQ5W0A0 696 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 PRRT2Q7Z6L0 340 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 C12orf40Q86WS4 652 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 DDX42Q86XP3 938 aaKnown RBP eCLIP5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 MCATQ8IVS2 390 aaKnown RBP5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 PHACTR4Q8IZ21 702 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 FAM13CQ8NE31 585 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 SMARCC1Q92922 1105 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 MRPL4Q9BYD3 311 aaKnown RBP5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 INTS7Q9NVH2 962 aaKnown RBP5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 SLC52A1Q9NWF4 448 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 LRP2BPQ9P2M1 347 aa5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 MRPS23Q9Y3D9 190 aaKnown RBP5.24□□□□□ -1.57
TRAPPC13-208ENST00000505553 DNAJC25-GNG10A0A024R161 153 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 TRBV23-1A0A0A0MS06 115 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 CCDC194A0A1B0GVG4 234 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 A0A1W2PQU0 124 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 IGF2BP3O00425 579 aaKnown RBP eCLIP5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 FANCGO15287 622 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 L1CAMP32004 1257 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 CDKN1CP49918 316 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 CLCN7P51798 805 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 CBX2Q14781 532 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 BRDTQ58F21 947 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 SLC6A19Q695T7 634 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 ATL2Q8NHH9 583 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 ACSF2Q96CM8 615 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 EXOC2Q96KP1 924 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 AARSD1Q9BTE6 412 aaKnown RBP5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 PRDM10Q9NQV6 1147 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 SUCOQ9UBS9 1254 aaKnown RBP5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 RGS13O14921 159 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 RAPGEF3O95398 923 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 SRFP11831 508 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 GBP1P32455 592 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 EVA1CP58658 441 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 RING1Q06587 406 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 FAM209AQ5JX71 171 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 FOXB2Q5VYV0 432 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 HEATR6Q6AI08 1181 aaKnown RBP5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 RNF180Q86T96 592 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 GGNQ86UU5 652 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 HID1Q8IV36 788 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 SPACA3Q8IXA5 215 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 AHI1Q8N157 1196 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 KCT2Q8NC54 265 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 ZNF507Q8TCN5 953 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 CCDC74BQ96LY2 380 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 HEXIM2Q96MH2 286 aaKnown RBP5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 MYH16Q9H6N6 1097 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 ARHGEF4Q9NR80 690 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 EID1Q9Y6B2 187 aa5.23□□□□□ -1.57
TRAPPC13-208ENST00000505553 PITPNM2Q9BZ72 1349 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 CNTNAP4Q9C0A0 1308 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 GNAT3A8MTJ3 354 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 GSG1L2A8MUP6 293 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 TPD52L2O43399 206 aaKnown RBP5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 RAC2P15153 192 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 POU3F3P20264 500 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 EPHB1P54762 984 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 SUMO1P63165 101 aaKnown RBP5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 DDX46Q7L014 1031 aaKnown RBP5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 LRRTM3Q86VH5 581 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 MRPL41Q8IXM3 137 aaKnown RBP5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 PPM1KQ8N3J5 372 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 CXorf38Q8TB03 319 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 TMEM87BQ96K49 555 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 C8orf48Q96LL4 319 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 SLC6A18Q96N87 628 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 CARS2Q9HA77 564 aaKnown RBP5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 RTEL1Q9NZ71 1219 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 TJP2Q9UDY2 1190 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 RIPOR2Q9Y4F9 1068 aa5.22□□□□□ -1.57
TRAPPC13-208ENST00000505553 PRC1O43663 620 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 EIF5BO60841 1220 aaKnown RBP5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 CLEC3AO75596 197 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 NPTXRO95502 500 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 MAP4K4O95819 1239 aaPredicted RBP5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 ADRB1P08588 477 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 FGFR1P11362 822 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 POLR2BP30876 1174 aaKnown RBP5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 PPP2R2AP63151 447 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 GORABQ5T7V8 394 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 ZBTB37Q5TC79 503 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 FAM214BQ7L5A3 538 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 UBR7Q8N806 425 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 PPP1R14AQ96A00 147 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 HAUS7Q99871 368 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 GBP3Q9H0R5 595 aa5.21□□□□□ -1.58
TRAPPC13-208ENST00000505553 WASHC2CQ9Y4E1 1318 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 NOP56O00567 594 aaKnown RBP5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 PPM1BO75688 479 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 ALDH1L1O75891 902 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 TP53P04637 393 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 EPHX1P07099 455 aa5.2□□□□□ -1.58
TRAPPC13-208ENST00000505553 TBX4P57082 545 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms