RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
RFC1-210ENST00000505077 VAT1LQ9HCJ6 419 aa11.84□□□□□ -0.51
RFC1-210ENST00000505077 BARHL2Q9NY43 387 aa11.84□□□□□ -0.51
RFC1-210ENST00000505077 ZNF536O15090 1300 aa11.84□□□□□ -0.51
RFC1-210ENST00000505077 TLR2O60603 784 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 JAK2O60674 1132 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 SLC25A27O95847 323 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 GJB2P29033 226 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 ERVK-9P63128 1117 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 ERVK-24P63145 666 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 HTRA3P83110 453 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 CRHR2Q13324 411 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 PKN1Q16512 942 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 SNRNP48Q6IEG0 339 aaKnown RBP11.83□□□□□ -0.52
RFC1-210ENST00000505077 GALNT17Q6IS24 598 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.83□□□□□ -0.52
RFC1-210ENST00000505077 RIOX2Q8IUF8 465 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 GPRC5AQ8NFJ5 357 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 ZIC5Q96T25 663 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 SPATC1LQ9H0A9 340 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 CWC22Q9HCG8 908 aaKnown RBP11.83□□□□□ -0.52
RFC1-210ENST00000505077 FBXO40Q9UH90 709 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 CCPG1Q9ULG6 757 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 ZSWIM8A7E2V4 1837 aa11.83□□□□□ -0.52
RFC1-210ENST00000505077 BCRP11274 1271 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 FDPSP14324 419 aaKnown RBP11.82□□□□□ -0.52
RFC1-210ENST00000505077 CALML3P27482 149 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 STAT3P40763 770 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 NAPAP54920 295 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 TRIM29Q14134 588 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 TMEM132BQ14DG7 1078 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 NOM1Q5C9Z4 860 aaKnown RBP11.82□□□□□ -0.52
RFC1-210ENST00000505077 WWC2Q6AWC2 1192 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 CCDC174Q6PII3 467 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 HEATR3Q7Z4Q2 680 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 SAMD3Q8N6K7 520 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 CHST13Q8NET6 341 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 BICD2Q8TD16 824 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 DDX11Q96FC9 970 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 ALG1Q9BT22 464 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 PAGR1Q9BTK6 254 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 MROH8Q9H579 483 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 MAP3K20Q9NYL2 800 aaKnown RBP11.82□□□□□ -0.52
RFC1-210ENST00000505077 RBPJLQ9UBG7 517 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 MRPL11Q9Y3B7 192 aaKnown RBP11.82□□□□□ -0.52
RFC1-210ENST00000505077 PCDHA1Q9Y5I3 950 aa11.82□□□□□ -0.52
RFC1-210ENST00000505077 STXBP3O00186 592 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 PPP1R11O60927 126 aaPredicted RBP11.81□□□□□ -0.52
RFC1-210ENST00000505077 CNMDO75829 334 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 GNA11P29992 359 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 GHRHRQ02643 423 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 PLS1Q14651 629 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 MCTP2Q6DN12 878 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 C17orf99Q6UX52 265 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 MCF2L2Q86YR7 1114 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 CPXCR1Q8N123 301 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 C8orf76Q96K31 380 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 IPO9Q96P70 1041 aaKnown RBP11.81□□□□□ -0.52
RFC1-210ENST00000505077 BEGAINQ9BUH8 593 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 ZMYND12Q9H0C1 365 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 ACAD9Q9H845 621 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 RAVER2Q9HCJ3 691 aaKnown RBP11.81□□□□□ -0.52
RFC1-210ENST00000505077 BRMS1Q9HCU9 246 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 BTBD7Q9P203 1132 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 PFASO15067 1338 aa11.81□□□□□ -0.52
RFC1-210ENST00000505077 WDR81Q562E7 1941 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 hCG_1642624A0A1W2PR95 340 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 MAPK4P31152 587 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 TMEM132AQ24JP5 1023 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 USH1GQ495M9 461 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 POTEEQ6S8J3 1075 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 ANKRD13CQ8N6S4 541 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 DAGLBQ8NCG7 672 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 FBXO18Q8NFZ0 1043 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 PIBF1Q8WXW3 757 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 GPKOWQ92917 476 aaPredicted RBP eCLIP11.8□□□□□ -0.52
RFC1-210ENST00000505077 CUL5Q93034 780 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 MOV10L1Q9BXT6 1211 aaKnown RBP11.8□□□□□ -0.52
RFC1-210ENST00000505077 C6orf50Q9HD87 102 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 TXNRD2Q9NNW7 524 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 RNF146Q9NTX7 359 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 RNF186Q9NXI6 227 aa11.8□□□□□ -0.52
RFC1-210ENST00000505077 PIK3CDO00329 1044 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 MMP1P03956 469 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 ALAS1P13196 640 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 ADCY7P51828 1080 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 MRPL12P52815 198 aaKnown RBP11.79□□□□□ -0.52
RFC1-210ENST00000505077 SNAP25P60880 206 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 SAFBQ15424 915 aaKnown RBP eCLIP11.79□□□□□ -0.52
RFC1-210ENST00000505077 LARP1BQ659C4 914 aaKnown RBP11.79□□□□□ -0.52
RFC1-210ENST00000505077 CCAR1Q8IX12 1150 aaKnown RBP11.79□□□□□ -0.52
RFC1-210ENST00000505077 ABRAQ8N0Z2 381 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 REXO1Q8N1G1 1221 aaKnown RBP11.79□□□□□ -0.52
RFC1-210ENST00000505077 DNAJC5GQ8N7S2 189 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 AGBL1Q96MI9 1066 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 TRERF1Q96PN7 1200 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 PHF20Q9BVI0 1012 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 RIC8AQ9NPQ8 531 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 VPS54Q9P1Q0 977 aa11.79□□□□□ -0.52
RFC1-210ENST00000505077 H3BQV1 296 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms