RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 FDPSP14324 419 aaKnown RBP15.68■□□□□ 0.1
TCOF1-207ENST00000504761 MYOCDQ8IZQ8 938 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 TACC1O75410 805 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 CCDC172P0C7W6 258 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 PTPREP23469 700 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 PPP1R9BQ96SB3 815 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 SLF1Q9BQI6 1058 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 DESI2Q9BSY9 194 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 PANK4Q9NVE7 773 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 CTAGE9A4FU28 777 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 GOLGA6L10A6NI86 522 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 MKRN3Q13064 507 aaKnown RBP15.68■□□□□ 0.1
TCOF1-207ENST00000504761 FAM26FQ5R3K3 315 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 SLFN12Q8IYM2 578 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 LARP4BQ92615 738 aaKnown RBP15.68■□□□□ 0.1
TCOF1-207ENST00000504761 IMPG2Q9BZV3 1241 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 MAN1B1Q9UKM7 699 aa15.68■□□□□ 0.1
TCOF1-207ENST00000504761 EIF3JO75822 258 aaKnown RBP15.67■□□□□ 0.1
TCOF1-207ENST00000504761 ASNSP08243 561 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 ATP1A3P13637 1013 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 CETN2P41208 172 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 CYP2J2P51589 502 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 MCM6Q14566 821 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 CDC42EP5Q6NZY7 148 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 EHBP1Q8NDI1 1231 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 POLD4Q9HCU8 107 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 PLCG1P19174 1290 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 GSDMAQ96QA5 445 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 KDM3AQ9Y4C1 1321 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 SPDYE4A6NLX3 237 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 TMEM110-MUSTN1A8MSY1 372 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 GJA10Q969M2 543 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 IFT74Q96LB3 600 aa15.67■□□□□ 0.1
TCOF1-207ENST00000504761 PP2D1A8MPX8 630 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 XKR9Q5GH70 373 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 SPATA1Q5VX52 437 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 TRIML1Q8N9V2 468 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 FNBP1Q96RU3 617 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 SAMSN1Q9NSI8 373 aaKnown RBP15.66■□□□□ 0.1
TCOF1-207ENST00000504761 EIF2AK2P19525 551 aaKnown RBP15.66■□□□□ 0.1
TCOF1-207ENST00000504761 STRIP1Q5VSL9 837 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 EEPD1Q7L9B9 569 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 OSBPL5Q9H0X9 879 aaPredicted RBP15.66■□□□□ 0.1
TCOF1-207ENST00000504761 BAZ2BQ9UIF8 2168 aaKnown RBP15.66■□□□□ 0.1
TCOF1-207ENST00000504761 STK36Q9NRP7 1315 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 POTEMA6NI47 508 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 SLU7O95391 586 aaKnown RBP15.66■□□□□ 0.1
TCOF1-207ENST00000504761 DPEP1P16444 411 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 GJC1P36383 396 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 GRM4Q14833 912 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 CCDC84Q86UT8 332 aaPredicted RBP15.66■□□□□ 0.1
TCOF1-207ENST00000504761 AZI2Q9H6S1 392 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 ZBTB5O15062 677 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 POLR3GO15318 223 aaPredicted RBP15.66■□□□□ 0.1
TCOF1-207ENST00000504761 SUPT20HL1Q3ZLR7 823 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 PRAMEF18Q5VWM3 479 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 TIGD1Q96MW7 591 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 ANO3Q9BYT9 981 aa15.66■□□□□ 0.1
TCOF1-207ENST00000504761 PIK3C2AO00443 1686 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 CTAGE15A4D2H0 777 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 CALUO43852 315 aaPredicted RBP15.65■□□□□ 0.1
TCOF1-207ENST00000504761 CTAGE8P0CG41 777 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 SPP2Q13103 211 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 FAM102BQ5T8I3 360 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 CTAGE6Q86UF2 777 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 MCF2L2Q86YR7 1114 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 CTAGE4Q8IX94 777 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 ZNF577Q9BSK1 485 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 MTA3Q9BTC8 594 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 LRRC4BQ9NT99 713 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 IMPACTQ9P2X3 320 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 NWD1Q149M9 1564 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 NRXN3Q9Y4C0 1643 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 RRAGAQ7L523 313 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 PAGE5Q96GU1 130 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 HPS5Q9UPZ3 1129 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 RASA1P20936 1047 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 QRICH1Q2TAL8 776 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 FAM178BQ8IXR5 827 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 WRNIP1Q96S55 665 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 TEKT3Q9BXF9 490 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 ZHX2Q9Y6X8 837 aa15.65■□□□□ 0.1
TCOF1-207ENST00000504761 FOXN1O15353 648 aa15.64■□□□□ 0.1
TCOF1-207ENST00000504761 TAX1BP1Q86VP1 789 aa15.64■□□□□ 0.1
TCOF1-207ENST00000504761 ADGRF4Q8IZF3 695 aa15.64■□□□□ 0.1
TCOF1-207ENST00000504761 PSMB7Q99436 277 aa15.64■□□□□ 0.1
TCOF1-207ENST00000504761 RIOK1Q9BRS2 568 aaKnown RBP15.64■□□□□ 0.1
TCOF1-207ENST00000504761 SYNCQ9H7C4 482 aa15.64■□□□□ 0.1
TCOF1-207ENST00000504761 MLXIPQ9HAP2 919 aa15.64■□□□□ 0.1
TCOF1-207ENST00000504761 ARHGAP6O43182 974 aa15.64■□□□□ 0.09
TCOF1-207ENST00000504761 GNPTABQ3T906 1256 aa15.64■□□□□ 0.09
TCOF1-207ENST00000504761 FMR1NBQ8N0W7 255 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-207ENST00000504761 GBP3Q9H0R5 595 aa15.64■□□□□ 0.09
TCOF1-207ENST00000504761 MTMR4Q9NYA4 1195 aa15.64■□□□□ 0.09
TCOF1-207ENST00000504761 PYCARDQ9ULZ3 195 aa15.64■□□□□ 0.09
TCOF1-207ENST00000504761 RABGAP1Q9Y3P9 1069 aa15.64■□□□□ 0.09
TCOF1-207ENST00000504761 RNASE9P60153 205 aaKnown RBP15.64■□□□□ 0.09
TCOF1-207ENST00000504761 SUGCTQ9HAC7 445 aa15.64■□□□□ 0.09
TCOF1-207ENST00000504761 LAD1O00515 517 aa15.64■□□□□ 0.09
TCOF1-207ENST00000504761 DESP17661 470 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms