RNA–Protein interactions for RNA: ENST00000504309.5

SDHA-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-204ENST00000504309 HDLBPQ00341 1268 aaKnown RBP20.26■□□□□ 0.83
SDHA-204ENST00000504309 GPATCH4Q5T3I0 446 aaKnown RBP20.26■□□□□ 0.83
SDHA-204ENST00000504309 CCDC17Q96LX7 622 aa20.26■□□□□ 0.83
SDHA-204ENST00000504309 DHX36Q9H2U1 1008 aaKnown RBP20.26■□□□□ 0.83
SDHA-204ENST00000504309 PBX1P40424 430 aa20.25■□□□□ 0.83
SDHA-204ENST00000504309 ORC2Q13416 577 aaPredicted RBP20.25■□□□□ 0.83
SDHA-204ENST00000504309 KMT5BQ4FZB7 885 aa20.25■□□□□ 0.83
SDHA-204ENST00000504309 PPP1R18Q6NYC8 613 aa20.25■□□□□ 0.83
SDHA-204ENST00000504309 USP17L10C9JJH3 530 aa20.25■□□□□ 0.83
SDHA-204ENST00000504309 SLC37A4O43826 429 aa20.25■□□□□ 0.83
SDHA-204ENST00000504309 TDP2O95551 362 aa20.25■□□□□ 0.83
SDHA-204ENST00000504309 KCNB1Q14721 858 aa20.25■□□□□ 0.83
SDHA-204ENST00000504309 C7orf43Q8WVR3 580 aa20.25■□□□□ 0.83
SDHA-204ENST00000504309 CTAGE1Q96RT6 745 aa20.25■□□□□ 0.83
SDHA-204ENST00000504309 BAG1Q99933 345 aaPredicted RBP20.25■□□□□ 0.83
SDHA-204ENST00000504309 MMTAG2Q9BU76 263 aaKnown RBP20.25■□□□□ 0.83
SDHA-204ENST00000504309 KIF2AO00139 706 aaPredicted RBP20.24■□□□□ 0.83
SDHA-204ENST00000504309 ARHGAP6O43182 974 aa20.24■□□□□ 0.83
SDHA-204ENST00000504309 MYL1P05976 194 aa20.24■□□□□ 0.83
SDHA-204ENST00000504309 UBE2SQ16763 222 aa20.24■□□□□ 0.83
SDHA-204ENST00000504309 ZSCAN29Q8IWY8 852 aaPredicted RBP20.24■□□□□ 0.83
SDHA-204ENST00000504309 IGSF22Q8N9C0 903 aa20.24■□□□□ 0.83
SDHA-204ENST00000504309 CNKSR1Q969H4 720 aa20.24■□□□□ 0.83
SDHA-204ENST00000504309 MTMR9Q96QG7 549 aa20.24■□□□□ 0.83
SDHA-204ENST00000504309 RIC8AQ9NPQ8 531 aa20.24■□□□□ 0.83
SDHA-204ENST00000504309 PI4KBQ9UBF8 816 aa20.24■□□□□ 0.83
SDHA-204ENST00000504309 SERPINA10Q9UK55 444 aa20.24■□□□□ 0.83
SDHA-204ENST00000504309 CCT6AP40227 531 aaKnown RBP20.23■□□□□ 0.83
SDHA-204ENST00000504309 KRT31Q15323 416 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 SLC15A2Q16348 729 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 ADSSL1Q8N142 457 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 MTMR8Q96EF0 704 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 CUEDC2Q9H467 287 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 TRIM49BA6NDI0 452 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 ZBTB5O15062 677 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 EEF2P13639 858 aaKnown RBP20.23■□□□□ 0.83
SDHA-204ENST00000504309 TXKP42681 527 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 TNNI2P48788 182 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 CLK2P49760 499 aaKnown RBP20.23■□□□□ 0.83
SDHA-204ENST00000504309 CALCRLQ16602 461 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 CERKLQ49MI3 558 aaPredicted RBP20.23■□□□□ 0.83
SDHA-204ENST00000504309 FCHSD1Q86WN1 690 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 KIF18AQ8NI77 898 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 MAGEF1Q9HAY2 307 aa20.23■□□□□ 0.83
SDHA-204ENST00000504309 RHOBTB3O94955 611 aa20.22■□□□□ 0.83
SDHA-204ENST00000504309 EZH2Q15910 746 aaKnown RBP20.22■□□□□ 0.83
SDHA-204ENST00000504309 LIMA1Q9UHB6 759 aaKnown RBP20.22■□□□□ 0.83
SDHA-204ENST00000504309 CCP110O43303 1012 aa20.22■□□□□ 0.83
SDHA-204ENST00000504309 RAD21O60216 631 aa20.22■□□□□ 0.83
SDHA-204ENST00000504309 STX10O60499 249 aa20.22■□□□□ 0.83
SDHA-204ENST00000504309 TRIM9Q9C026 710 aa20.22■□□□□ 0.83
SDHA-204ENST00000504309 YDJCA8MPS7 323 aa20.21■□□□□ 0.83
SDHA-204ENST00000504309 PMS1P54277 932 aaKnown RBP20.21■□□□□ 0.83
SDHA-204ENST00000504309 FILIP1LQ4L180 1135 aa20.21■□□□□ 0.83
SDHA-204ENST00000504309 TCP11X2Q5H9J9 407 aa20.21■□□□□ 0.83
SDHA-204ENST00000504309 PPP4R3BQ5MIZ7 849 aa20.21■□□□□ 0.83
SDHA-204ENST00000504309 TATDN1Q6P1N9 297 aa20.21■□□□□ 0.83
SDHA-204ENST00000504309 SYT10Q6XYQ8 523 aa20.21■□□□□ 0.83
SDHA-204ENST00000504309 REXO1L1PQ8IX06 675 aa20.21■□□□□ 0.83
SDHA-204ENST00000504309 GIMAP8Q8ND71 665 aaPredicted RBP20.21■□□□□ 0.83
SDHA-204ENST00000504309 CUL5Q93034 780 aa20.21■□□□□ 0.83
SDHA-204ENST00000504309 TDRD3Q9H7E2 651 aaKnown RBP20.21■□□□□ 0.83
SDHA-204ENST00000504309 SMCHD1A6NHR9 2005 aa20.21■□□□□ 0.83
SDHA-204ENST00000504309 KCNJ18B7U540 433 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 NPM3O75607 178 aaKnown RBP20.2■□□□□ 0.82
SDHA-204ENST00000504309 RBL2Q08999 1139 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 KCNJ12Q14500 433 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 SEPT2Q15019 361 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 PDCL3Q9H2J4 239 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 KANSL2Q9H9L4 492 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 NYAP2Q9P242 653 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 ATRNL1Q5VV63 1379 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 POTEMA6NI47 508 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 LRRC10BA6NIK2 292 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 AKR1B15C9JRZ8 316 aaPredicted RBP20.2■□□□□ 0.82
SDHA-204ENST00000504309 GDF11O95390 407 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 FXR2P51116 673 aaKnown RBP eCLIP20.2■□□□□ 0.821e-6■■□□□ 13.6
SDHA-204ENST00000504309 EN1Q05925 392 aaPredicted RBP20.2■□□□□ 0.82
SDHA-204ENST00000504309 SPAG1Q07617 926 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 SIAH1Q8IUQ4 282 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 MKL1Q969V6 931 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 TRIM34Q9BYJ4 488 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 TAB2Q9NYJ8 693 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 PPP2R2CQ9Y2T4 447 aa20.2■□□□□ 0.82
SDHA-204ENST00000504309 SLC1A4P43007 532 aa20.19■□□□□ 0.82
SDHA-204ENST00000504309 COPB1P53618 953 aaKnown RBP20.19■□□□□ 0.82
SDHA-204ENST00000504309 ICA1Q05084 483 aa20.19■□□□□ 0.82
SDHA-204ENST00000504309 NCBP1Q09161 790 aaKnown RBP20.19■□□□□ 0.82
SDHA-204ENST00000504309 GRB10Q13322 594 aa20.19■□□□□ 0.82
SDHA-204ENST00000504309 TOGARAM2Q6ZUX3 1019 aa20.19■□□□□ 0.82
SDHA-204ENST00000504309 VPS16Q9H269 839 aa20.19■□□□□ 0.82
SDHA-204ENST00000504309 LRWD1Q9UFC0 647 aa20.19■□□□□ 0.82
SDHA-204ENST00000504309 ITIH6Q6UXX5 1313 aa20.19■□□□□ 0.82
SDHA-204ENST00000504309 PPIP5K2O43314 1243 aa20.18■□□□□ 0.82
SDHA-204ENST00000504309 C21orf2O43822 256 aa20.18■□□□□ 0.82
SDHA-204ENST00000504309 QRICH1Q2TAL8 776 aa20.18■□□□□ 0.82
SDHA-204ENST00000504309 SLFN13Q68D06 897 aa20.18■□□□□ 0.82
SDHA-204ENST00000504309 IRF2BP1Q8IU81 584 aa20.18■□□□□ 0.82
SDHA-204ENST00000504309 DCAF4Q8WV16 495 aa20.18■□□□□ 0.82
SDHA-204ENST00000504309 ANKRD7Q92527 254 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms