RNA–Protein interactions for RNA: ENST00000504147.5

CDK7-203, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-203ENST00000504147 TRAF1Q13077 416 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 ORC2Q13416 577 aaPredicted RBP11.64□□□□□ -0.55
CDK7-203ENST00000504147 ZYXQ15942 572 aaKnown RBP11.64□□□□□ -0.55
CDK7-203ENST00000504147 UBE2SQ16763 222 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 C9orf131Q5VYM1 1079 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 KANK3Q6NY19 840 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 DTHD1Q6ZMT9 781 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 CCDC84Q86UT8 332 aaPredicted RBP11.64□□□□□ -0.55
CDK7-203ENST00000504147 FAM160B2Q86V87 743 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 GLIS2Q9BZE0 524 aaPredicted RBP11.64□□□□□ -0.55
CDK7-203ENST00000504147 DNAJC25Q9H1X3 360 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 TMEM60Q9H2L4 133 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 CBX8Q9HC52 389 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 HOOK1Q9UJC3 728 aaKnown RBP11.64□□□□□ -0.55
CDK7-203ENST00000504147 ZNF112Q9UJU3 913 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 FEM1BQ9UK73 627 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 PPP2R3BQ9Y5P8 575 aa11.64□□□□□ -0.55
CDK7-203ENST00000504147 ARFGEF1Q9Y6D6 1849 aa11.63□□□□□ -0.55
CDK7-203ENST00000504147 ACTN4O43707 911 aaKnown RBP11.63□□□□□ -0.55
CDK7-203ENST00000504147 LMOD1P29536 600 aaPredicted RBP11.63□□□□□ -0.55
CDK7-203ENST00000504147 INPP5BP32019 993 aa11.63□□□□□ -0.55
CDK7-203ENST00000504147 PRPHP41219 470 aa11.63□□□□□ -0.55
CDK7-203ENST00000504147 ZNF165P49910 485 aa11.63□□□□□ -0.55
CDK7-203ENST00000504147 STAT2P52630 851 aa11.63□□□□□ -0.55
CDK7-203ENST00000504147 NLRP12P59046 1061 aa11.63□□□□□ -0.55
CDK7-203ENST00000504147 MDM2Q00987 491 aaPredicted RBP11.63□□□□□ -0.55
CDK7-203ENST00000504147 ZRSR1Q15695 479 aaKnown RBP11.63□□□□□ -0.55
CDK7-203ENST00000504147 PRAMEF18Q5VWM3 479 aa11.63□□□□□ -0.55
CDK7-203ENST00000504147 PDILTQ8N807 584 aa11.63□□□□□ -0.55
CDK7-203ENST00000504147 FEZ1Q99689 392 aa11.63□□□□□ -0.55
CDK7-203ENST00000504147 GGA3Q9NZ52 723 aa11.63□□□□□ -0.55
CDK7-203ENST00000504147 USP25Q9UHP3 1055 aa11.63□□□□□ -0.55
CDK7-203ENST00000504147 USP17L15C9J2P7 530 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 USP17L13C9JLJ4 530 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 USP17L11C9JVI0 530 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 USP17L18D6R9N7 530 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 USP17L22D6RA61 530 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 USP17L17D6RBQ6 530 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 USP17L19D6RCP7 530 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 USP17L20D6RJB6 530 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 EDIL3O43854 480 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 NEMFO60524 1076 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 OR52Z1P0C646 297 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 SLFN14P0C7P3 912 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 USP17L24Q0WX57 530 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 PNOCQ13519 176 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 SUPT20HL1Q3ZLR7 823 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 MCTP2Q6DN12 878 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 USP17L6PQ6QN14 398 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 C11orf57Q6ZUT1 292 aaPredicted RBP11.62□□□□□ -0.55
CDK7-203ENST00000504147 KIFC2Q96AC6 838 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 DHX58Q96C10 678 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 PYM1Q9BRP8 204 aaKnown RBP11.62□□□□□ -0.55
CDK7-203ENST00000504147 KIAA1683Q9H0B3 1180 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 RANBP17Q9H2T7 1088 aaKnown RBP11.62□□□□□ -0.55
CDK7-203ENST00000504147 ADARB2Q9NS39 739 aaKnown RBP11.62□□□□□ -0.55
CDK7-203ENST00000504147 TUBE1Q9UJT0 475 aa11.62□□□□□ -0.55
CDK7-203ENST00000504147 BAZ2BQ9UIF8 2168 aaKnown RBP11.61□□□□□ -0.55
CDK7-203ENST00000504147 MYH6P13533 1939 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 A0A087WWV3 80 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 A0A087X0B3 334 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 BIN1O00499 593 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 MEIS2O14770 477 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 FOXN1O15353 648 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 TXLNAP40222 546 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 POSTNQ15063 836 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 USH1GQ495M9 461 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 PPP4R3AQ6IN85 833 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 ILDR2Q71H61 639 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 LUZP1Q86V48 1076 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 CEP57L1Q8IYX8 460 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 SCYL3Q8IZE3 742 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 IQUBQ8NA54 791 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 LPAR1Q92633 364 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 PAGE5Q96GU1 130 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 CCDC34Q96HJ3 373 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 NAP1L4Q99733 375 aaKnown RBP11.61□□□□□ -0.55
CDK7-203ENST00000504147 WDR18Q9BV38 432 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 NAT10Q9H0A0 1025 aaKnown RBP11.61□□□□□ -0.55
CDK7-203ENST00000504147 PICK1Q9NRD5 415 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 PCDHA5Q9Y5H7 936 aa11.61□□□□□ -0.55
CDK7-203ENST00000504147 PITPNM2Q9BZ72 1349 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 MYH8P13535 1937 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 WDR46O15213 610 aaKnown RBP11.6□□□□□ -0.55
CDK7-203ENST00000504147 FOSP01100 380 aaPredicted RBP11.6□□□□□ -0.55
CDK7-203ENST00000504147 PTPRAP18433 802 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 USP11P51784 963 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 AP3B2Q13367 1082 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 IQCB1Q15051 598 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 CALCRLQ16602 461 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 DPY19L2Q6NUT2 758 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 CCDC174Q6PII3 467 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 SH3RF1Q7Z6J0 888 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 TEX2Q8IWB9 1127 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 GRAMD1CQ8IYS0 662 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 ZKSCAN4Q969J2 545 aaPredicted RBP11.6□□□□□ -0.55
CDK7-203ENST00000504147 DCPSQ96C86 337 aaKnown RBP11.6□□□□□ -0.55
CDK7-203ENST00000504147 PDLIM2Q96JY6 352 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 MTMR9Q96QG7 549 aa11.6□□□□□ -0.55
CDK7-203ENST00000504147 WRNIP1Q96S55 665 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms