RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 HOXA7P31268 230 aaPredicted RBP17.25■□□□□ 0.35
SGCA-204ENST00000504073 DNM1Q05193 864 aaKnown RBP17.25■□□□□ 0.35
SGCA-204ENST00000504073 SF3A1Q15459 793 aaKnown RBP17.25■□□□□ 0.35
SGCA-204ENST00000504073 FOXD4L6Q3SYB3 417 aaPredicted RBP17.25■□□□□ 0.35
SGCA-204ENST00000504073 CCDC174Q6PII3 467 aa17.25■□□□□ 0.35
SGCA-204ENST00000504073 FOXD4L3Q6VB84 417 aaPredicted RBP17.25■□□□□ 0.35
SGCA-204ENST00000504073 MCF2L2Q86YR7 1114 aa17.25■□□□□ 0.35
SGCA-204ENST00000504073 SAMD3Q8N6K7 520 aa17.25■□□□□ 0.35
SGCA-204ENST00000504073 COA7Q96BR5 231 aa17.25■□□□□ 0.35
SGCA-204ENST00000504073 WNK4Q96J92 1243 aa17.25■□□□□ 0.35
SGCA-204ENST00000504073 GJB4Q9NTQ9 266 aa17.25■□□□□ 0.35
SGCA-204ENST00000504073 CCPG1Q9ULG6 757 aa17.25■□□□□ 0.35
SGCA-204ENST00000504073 AGTPBP1Q9UPW5 1226 aa17.25■□□□□ 0.35
SGCA-204ENST00000504073 FOSP01100 380 aaPredicted RBP17.24■□□□□ 0.35
SGCA-204ENST00000504073 DSG3P32926 999 aa17.24■□□□□ 0.35
SGCA-204ENST00000504073 AP3B2Q13367 1082 aa17.24■□□□□ 0.35
SGCA-204ENST00000504073 STK38Q15208 465 aa17.24■□□□□ 0.35
SGCA-204ENST00000504073 NFKBIBQ15653 356 aa17.24■□□□□ 0.35
SGCA-204ENST00000504073 SKOR2Q2VWA4 1001 aaPredicted RBP17.24■□□□□ 0.35
SGCA-204ENST00000504073 TKFCQ3LXA3 575 aa17.24■□□□□ 0.35
SGCA-204ENST00000504073 USH1GQ495M9 461 aa17.24■□□□□ 0.35
SGCA-204ENST00000504073 SPATA32Q96LK8 384 aa17.24■□□□□ 0.35
SGCA-204ENST00000504073 NAP1L4Q99733 375 aaKnown RBP17.24■□□□□ 0.35
SGCA-204ENST00000504073 MAF1Q9H063 256 aa17.24■□□□□ 0.35
SGCA-204ENST00000504073 SLC38A10Q9HBR0 1119 aa17.24■□□□□ 0.35
SGCA-204ENST00000504073 FBXO28Q9NVF7 368 aa17.24■□□□□ 0.35
SGCA-204ENST00000504073 FIBPO43427 364 aa17.23■□□□□ 0.35
SGCA-204ENST00000504073 COPB2P35606 906 aa17.23■□□□□ 0.35
SGCA-204ENST00000504073 GRM1Q13255 1194 aa17.23■□□□□ 0.35
SGCA-204ENST00000504073 NONOQ15233 471 aaKnown RBP eCLIP17.23■□□□□ 0.35
SGCA-204ENST00000504073 BEGAINQ9BUH8 593 aa17.23■□□□□ 0.35
SGCA-204ENST00000504073 MCOLN1Q9GZU1 580 aa17.23■□□□□ 0.35
SGCA-204ENST00000504073 POLR3EQ9NVU0 708 aa17.23■□□□□ 0.35
SGCA-204ENST00000504073 MAP3K20Q9NYL2 800 aaKnown RBP17.23■□□□□ 0.35
SGCA-204ENST00000504073 SLC45A1Q9Y2W3 748 aa17.23■□□□□ 0.35
SGCA-204ENST00000504073 PTPRFP10586 1907 aa17.23■□□□□ 0.35
SGCA-204ENST00000504073 SPDYE3A6NKU9 549 aa17.22■□□□□ 0.35
SGCA-204ENST00000504073 VWA5AO00534 786 aa17.22■□□□□ 0.35
SGCA-204ENST00000504073 YEATS4O95619 227 aa17.22■□□□□ 0.35
SGCA-204ENST00000504073 ORC2Q13416 577 aaPredicted RBP17.22■□□□□ 0.35
SGCA-204ENST00000504073 PIK3AP1Q6ZUJ8 805 aa17.22■□□□□ 0.35
SGCA-204ENST00000504073 PAXIP1Q6ZW49 1069 aaPredicted RBP17.22■□□□□ 0.35
SGCA-204ENST00000504073 KCNG4Q8TDN1 519 aa17.22■□□□□ 0.35
SGCA-204ENST00000504073 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
SGCA-204ENST00000504073 CNPY2Q9Y2B0 182 aa17.22■□□□□ 0.35
SGCA-204ENST00000504073 LOC285556D6RIA3 1793 aa17.22■□□□□ 0.35
SGCA-204ENST00000504073 ELP1O95163 1332 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 ZNF157P51786 506 aaPredicted RBP17.21■□□□□ 0.35
SGCA-204ENST00000504073 NR5A1Q13285 461 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 SPRYD7Q5W111 196 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 ANO1Q5XXA6 986 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 CPXCR1Q8N123 301 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 TMEM87AQ8NBN3 555 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 CCDC102AQ96A19 550 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 CAPNS2Q96L46 248 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 TEX13BQ9BXU2 312 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 RTEL1Q9NZ71 1219 aa17.21■□□□□ 0.35
SGCA-204ENST00000504073 CCL15-CCL14A0A0B4J2E2 113 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 MANSC4A6NHS7 340 aaPredicted RBP17.2■□□□□ 0.34
SGCA-204ENST00000504073 GCOM1H8Y6P7 765 aaPredicted RBP17.2■□□□□ 0.34
SGCA-204ENST00000504073 ATP2A1O14983 1001 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 PPP1R11O60927 126 aaPredicted RBP17.2■□□□□ 0.34
SGCA-204ENST00000504073 MBD3O95983 291 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 POLR2MP0CAP2 368 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 SNAP25P60880 206 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 FMR1Q06787 632 aaKnown RBP eCLIP17.2■□□□□ 0.34
SGCA-204ENST00000504073 CCL15Q16663 113 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 CST9Q5W186 159 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 CYP4F22Q6NT55 531 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 TYW1BQ6NUM6 668 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 RGMBQ6NW40 437 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 OXER1Q8TDS5 423 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 ANP32EQ9BTT0 268 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 FBXO40Q9UH90 709 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 PCDHA6Q9UN73 950 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 RABGAP1Q9Y3P9 1069 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 PCDHA8Q9Y5H6 950 aa17.2■□□□□ 0.34
SGCA-204ENST00000504073 CASP8AP2Q9UKL3 1982 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 PIK3CDO00329 1044 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 PRPF40AO75400 957 aaKnown RBP17.19■□□□□ 0.34
SGCA-204ENST00000504073 ALAS1P13196 640 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 INHBEP58166 350 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 DGKZQ13574 1117 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 TTC38Q5R3I4 469 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 FAM173BQ6P4H8 233 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 LBX2Q6XYB7 198 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 ANKRD23Q86SG2 305 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 HHIPL1Q96JK4 782 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 USP28Q96RU2 1077 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 RAVER2Q9HCJ3 691 aaKnown RBP17.19■□□□□ 0.34
SGCA-204ENST00000504073 TFIP11Q9UBB9 837 aaKnown RBP17.19■□□□□ 0.34
SGCA-204ENST00000504073 BIN2Q9UBW5 565 aaPredicted RBP17.19■□□□□ 0.34
SGCA-204ENST00000504073 ADAMTS5Q9UNA0 930 aa17.19■□□□□ 0.34
SGCA-204ENST00000504073 TCHHQ07283 1943 aa17.18■□□□□ 0.34
SGCA-204ENST00000504073 SPDYE16A6NNV3 312 aaPredicted RBP17.18■□□□□ 0.34
SGCA-204ENST00000504073 NASPP49321 788 aaPredicted RBP17.18■□□□□ 0.34
SGCA-204ENST00000504073 UBE2HP62256 183 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms