RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ATP2B1P20020 1258 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 MARCKSP29966 332 aaPredicted RBP7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 IKQ13123 557 aaPredicted RBP7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 STK38Q15208 465 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 INF2Q27J81 1249 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 SH3D19Q5HYK7 790 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 TTC38Q5R3I4 469 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 LDLRAD1Q5T700 205 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 JAKMIP3Q5VZ66 844 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 SHC4Q6S5L8 630 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 POTEEQ6S8J3 1075 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 FAM160B2Q86V87 743 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 REXO1Q8N1G1 1221 aaKnown RBP7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 C4orf32Q8N8J7 132 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 REPS2Q8NFH8 660 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 ENGASEQ8NFI3 743 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 KCNG4Q8TDN1 519 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 CCDC12Q8WUD4 166 aaPredicted RBP7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 KIFC2Q96AC6 838 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 CLIC6Q96NY7 704 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 AMNQ9BXJ7 453 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 ELP3Q9H9T3 547 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 BRMS1Q9HCU9 246 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 C6orf50Q9HD87 102 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 BIN2Q9UBW5 565 aaPredicted RBP7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 FEM1BQ9UK73 627 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 PPP1R9AQ9ULJ8 1098 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 PCDHA1Q9Y5I3 950 aa7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 MORC2Q9Y6X9 1032 aaPredicted RBP7.9□□□□□ -1.14
TOPBP1-203ENST00000503464 FAM237AA0A1B0GTK4 181 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 SPDYE5A6NIY4 337 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 USP17L15C9J2P7 530 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 USP17L13C9JLJ4 530 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 USP17L11C9JVI0 530 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 USP17L18D6R9N7 530 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 USP17L22D6RA61 530 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 USP17L17D6RBQ6 530 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 USP17L19D6RCP7 530 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 USP17L20D6RJB6 530 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 GALR2O43603 387 aaPredicted RBP7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 PPP1R12BO60237 982 aaPredicted RBP7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 NR1I2O75469 434 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 PTPREP23469 700 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 GNA11P29992 359 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 GJA5P36382 358 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 ME1P48163 572 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 IREB2P48200 963 aaKnown RBP7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 TRAPPC10P48553 1259 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 ATP2C1P98194 919 aaPredicted RBP7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 USP17L24Q0WX57 530 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 SNW1Q13573 536 aaKnown RBP7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 MOGSQ13724 837 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 ZNF174Q15697 407 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 IL17AQ16552 155 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 ZSCAN23Q3MJ62 389 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 USH1GQ495M9 461 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 TREML2Q5T2D2 321 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 ADALQ6DHV7 355 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 CCDC174Q6PII3 467 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 USP17L6PQ6QN14 398 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 KRT25Q7Z3Z0 450 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 FBXO11Q86XK2 927 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 CHURC1Q8WUH1 139 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 CRYGNQ8WXF5 182 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 SLF1Q9BQI6 1058 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 AS3MTQ9HBK9 375 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 SLC38A10Q9HBR0 1119 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 HPSEQ9Y251 543 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 LRRC37A2A6NM11 1700 aa7.89□□□□□ -1.15
TOPBP1-203ENST00000503464 CCDC194A0A1B0GVG4 234 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 C19orf81C9J6K1 198 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 IRF6O14896 467 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 FLOT1O75955 427 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 NDUFA8P51970 172 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 USP14P54578 494 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 PPATQ06203 517 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 NONOQ15233 471 aaKnown RBP eCLIP7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 LCE2DQ5TA82 110 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 USP49Q70CQ1 688 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 LDHDQ86WU2 507 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 GAS2L3Q86XJ1 694 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 CCAR1Q8IX12 1150 aaKnown RBP7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 ANKRD13AQ8IZ07 590 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 FMR1NBQ8N0W7 255 aaPredicted RBP7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 FSIP1Q8NA03 581 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 BICD2Q8TD16 824 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 TBCKQ8TEA7 893 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 CLEC4DQ8WXI8 215 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 MRPS27Q92552 414 aaKnown RBP7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 TBC1D5Q92609 795 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 CUL5Q93034 780 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 ATG4CQ96DT6 458 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 AGBL1Q96MI9 1066 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 TANGO6Q9C0B7 1094 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 TMEM60Q9H2L4 133 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 PSTPIP2Q9H939 334 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 DACT1Q9NYF0 836 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 NOL7Q9UMY1 257 aaKnown RBP7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 ADAMTS5Q9UNA0 930 aa7.88□□□□□ -1.15
TOPBP1-203ENST00000503464 KCNH4Q9UQ05 1017 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms