RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.56■■□□□ 1.04
HERC6-204ENST00000502870 MKNK2Q9HBH9 465 aa21.56■■□□□ 1.04
HERC6-204ENST00000502870 HOMER2Q9NSB8 354 aa21.56■■□□□ 1.04
HERC6-204ENST00000502870 GRIN2DO15399 1336 aa21.55■■□□□ 1.04
HERC6-204ENST00000502870 SMIM22K7EJ46 135 aa21.55■■□□□ 1.04
HERC6-204ENST00000502870 RFXAPO00287 272 aa21.55■■□□□ 1.04
HERC6-204ENST00000502870 DYNC1LI2O43237 492 aaPredicted RBP21.55■■□□□ 1.04
HERC6-204ENST00000502870 RFC2P35250 354 aa21.55■■□□□ 1.04
HERC6-204ENST00000502870 TTLL4Q14679 1199 aa21.55■■□□□ 1.04
HERC6-204ENST00000502870 UBE3CQ15386 1083 aa21.55■■□□□ 1.04
HERC6-204ENST00000502870 FAM133AQ8N9E0 248 aa21.55■■□□□ 1.04
HERC6-204ENST00000502870 ALDH8A1Q9H2A2 487 aaPredicted RBP21.55■■□□□ 1.04
HERC6-204ENST00000502870 CERS4Q9HA82 394 aa21.55■■□□□ 1.04
HERC6-204ENST00000502870 SYNPO2Q9UMS6 1093 aa21.55■■□□□ 1.04
HERC6-204ENST00000502870 COG6Q9Y2V7 657 aa21.55■■□□□ 1.04
HERC6-204ENST00000502870 CNTN2Q02246 1040 aa21.54■■□□□ 1.04
HERC6-204ENST00000502870 IQSEC1Q6DN90 963 aa21.54■■□□□ 1.04
HERC6-204ENST00000502870 ZSCAN25Q6NSZ9 544 aa21.54■■□□□ 1.04
HERC6-204ENST00000502870 ARNTL2Q8WYA1 636 aa21.54■■□□□ 1.04
HERC6-204ENST00000502870 KIF1BPQ96EK5 621 aa21.54■■□□□ 1.04
HERC6-204ENST00000502870 SCN5AQ14524 2016 aa21.54■■□□□ 1.04
HERC6-204ENST00000502870 SMPD1P17405 629 aa21.53■■□□□ 1.04
HERC6-204ENST00000502870 RASA1P20936 1047 aa21.53■■□□□ 1.04
HERC6-204ENST00000502870 PSMC6P62333 389 aa21.53■■□□□ 1.04
HERC6-204ENST00000502870 DEFB128Q7Z7B8 93 aa21.53■■□□□ 1.04
HERC6-204ENST00000502870 ZNF287Q9HBT7 754 aa21.53■■□□□ 1.04
HERC6-204ENST00000502870 CLIP2Q9UDT6 1046 aa21.53■■□□□ 1.04
HERC6-204ENST00000502870 TKFCQ3LXA3 575 aa21.52■■□□□ 1.04
HERC6-204ENST00000502870 RPAP2Q8IXW5 612 aaPredicted RBP21.52■■□□□ 1.04
HERC6-204ENST00000502870 A1CFQ9NQ94 594 aaKnown RBP21.52■■□□□ 1.04
HERC6-204ENST00000502870 POLR3EQ9NVU0 708 aa21.52■■□□□ 1.04
HERC6-204ENST00000502870 TNKSO95271 1327 aa21.52■■□□□ 1.03
HERC6-204ENST00000502870 TANC1Q9C0D5 1861 aa21.52■■□□□ 1.03
HERC6-204ENST00000502870 PI4K2BG5E9Z4 385 aa21.51■■□□□ 1.03
HERC6-204ENST00000502870 TAP1Q03518 808 aa21.51■■□□□ 1.03
HERC6-204ENST00000502870 SBK1Q52WX2 424 aa21.51■■□□□ 1.03
HERC6-204ENST00000502870 GMCL1P1Q8NEA9 526 aa21.51■■□□□ 1.03
HERC6-204ENST00000502870 VTA1Q9NP79 307 aa21.51■■□□□ 1.03
HERC6-204ENST00000502870 C11orf16Q9NQ32 467 aa21.51■■□□□ 1.03
HERC6-204ENST00000502870 RNF146Q9NTX7 359 aa21.51■■□□□ 1.03
HERC6-204ENST00000502870 COL4A4P53420 1690 aaPredicted RBP21.5■■□□□ 1.03
HERC6-204ENST00000502870 FAM86C2PA6NEL3 165 aa21.5■■□□□ 1.03
HERC6-204ENST00000502870 EPOPA6NHQ4 379 aa21.5■■□□□ 1.03
HERC6-204ENST00000502870 SLFNL1Q499Z3 407 aa21.5■■□□□ 1.03
HERC6-204ENST00000502870 KRT40Q6A162 431 aa21.5■■□□□ 1.03
HERC6-204ENST00000502870 HERC6Q8IVU3 1022 aa21.5■■□□□ 1.03
HERC6-204ENST00000502870 MKL1Q969V6 931 aa21.5■■□□□ 1.03
HERC6-204ENST00000502870 VWCEQ96DN2 955 aa21.5■■□□□ 1.03
HERC6-204ENST00000502870 TRMT13Q9NUP7 481 aaKnown RBP21.5■■□□□ 1.03
HERC6-204ENST00000502870 LMCD1Q9NZU5 365 aa21.5■■□□□ 1.03
HERC6-204ENST00000502870 ISY1Q9ULR0 285 aaKnown RBP21.5■■□□□ 1.03
HERC6-204ENST00000502870 SOWAHBA6NEL2 793 aa21.49■■□□□ 1.03
HERC6-204ENST00000502870 PRR33A8MZF0 331 aa21.49■■□□□ 1.03
HERC6-204ENST00000502870 CYP2C9P11712 490 aa21.49■■□□□ 1.03
HERC6-204ENST00000502870 BMP3P12645 472 aa21.49■■□□□ 1.03
HERC6-204ENST00000502870 STAT2P52630 851 aa21.49■■□□□ 1.03
HERC6-204ENST00000502870 GRB10Q13322 594 aa21.49■■□□□ 1.03
HERC6-204ENST00000502870 ALYREFQ86V81 257 aaKnown RBP21.49■■□□□ 1.03
HERC6-204ENST00000502870 RETREG2Q8NC44 543 aa21.49■■□□□ 1.03
HERC6-204ENST00000502870 CHURC1Q8WUH1 139 aa21.49■■□□□ 1.03
HERC6-204ENST00000502870 FTOQ9C0B1 505 aaKnown RBP eCLIP21.49■■□□□ 1.03
HERC6-204ENST00000502870 BOLA2Q9H3K6 86 aa21.49■■□□□ 1.03
HERC6-204ENST00000502870 GPHNQ9NQX3 736 aaPredicted RBP21.49■■□□□ 1.03
HERC6-204ENST00000502870 PITPNM1O00562 1244 aa21.48■■□□□ 1.03
HERC6-204ENST00000502870 BAIAP3O94812 1187 aa21.48■■□□□ 1.03
HERC6-204ENST00000502870 TTLL1O95922 423 aa21.48■■□□□ 1.03
HERC6-204ENST00000502870 ATP5JP18859 108 aa21.48■■□□□ 1.03
HERC6-204ENST00000502870 CPT1AP50416 773 aa21.48■■□□□ 1.03
HERC6-204ENST00000502870 BRDTQ58F21 947 aaPredicted RBP21.48■■□□□ 1.03
HERC6-204ENST00000502870 GIMAP6Q6P9H5 292 aa21.48■■□□□ 1.03
HERC6-204ENST00000502870 FAM160B2Q86V87 743 aa21.48■■□□□ 1.03
HERC6-204ENST00000502870 FBXO16Q8IX29 292 aaPredicted RBP21.48■■□□□ 1.03
HERC6-204ENST00000502870 ZNF444Q8N0Y2 327 aaPredicted RBP21.48■■□□□ 1.03
HERC6-204ENST00000502870 HAUS7Q99871 368 aa21.48■■□□□ 1.03
HERC6-204ENST00000502870 IGKV6D-41A0A0C4DH26 115 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 MINDY4BA8MYZ0 360 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 HMMRO75330 724 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 KCNJ6P48051 423 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 IKQ13123 557 aaPredicted RBP21.47■■□□□ 1.03
HERC6-204ENST00000502870 SLFN13Q68D06 897 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 TAPT1Q6NXT6 567 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 KIAA1211Q6ZU35 1233 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 EEPD1Q7L9B9 569 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 TRERF1Q96PN7 1200 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 BCL11AQ9H165 835 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 PDGFCQ9NRA1 345 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 MTMR4Q9NYA4 1195 aa21.47■■□□□ 1.03
HERC6-204ENST00000502870 TMEM232C9JQI7 657 aa21.46■■□□□ 1.03
HERC6-204ENST00000502870 ALAS1P13196 640 aa21.46■■□□□ 1.03
HERC6-204ENST00000502870 BFSP2Q13515 415 aa21.46■■□□□ 1.03
HERC6-204ENST00000502870 DUSP28Q4G0W2 176 aa21.46■■□□□ 1.03
HERC6-204ENST00000502870 FAM47CQ5HY64 1035 aa21.46■■□□□ 1.03
HERC6-204ENST00000502870 STK11IPQ8N1F8 1099 aa21.46■■□□□ 1.03
HERC6-204ENST00000502870 LRRC47Q8N1G4 583 aaKnown RBP21.46■■□□□ 1.03
HERC6-204ENST00000502870 KHSRPQ92945 711 aaKnown RBP eCLIP21.46■■□□□ 1.03
HERC6-204ENST00000502870 CEP95Q96GE4 821 aa21.46■■□□□ 1.03
HERC6-204ENST00000502870 MTG1Q9BT17 334 aaPredicted RBP21.46■■□□□ 1.03
HERC6-204ENST00000502870 PUS7LQ9H0K6 701 aaKnown RBP21.46■■□□□ 1.03
HERC6-204ENST00000502870 SCN10AQ9Y5Y9 1956 aa21.46■■□□□ 1.03
HERC6-204ENST00000502870 RAD50Q92878 1312 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms