RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 USP14P54578 494 aa8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 EVX2Q03828 476 aa8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 CTAGE6Q86UF2 777 aa8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 CTAGE4Q8IX94 777 aa8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 CERKQ8TCT0 537 aa8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 P2RX5Q93086 422 aa8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 RTFDC1Q9BY42 306 aaPredicted RBP8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 TMEM60Q9H2L4 133 aa8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 MED4Q9NPJ6 270 aa8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 EXOC1Q9NV70 894 aa8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 STK17AQ9UEE5 414 aa8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 TAOK2Q9UL54 1235 aa8.1□□□□□ -1.11
LYSMD3-203ENST00000500869 PVALEFA0A1B0GWK0 134 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 PJA2O43164 708 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 RASA1P20936 1047 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 PRDX5P30044 214 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 PMS1P54277 932 aaKnown RBP8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 HSP90AA4PQ58FG1 418 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 CENPPQ6IPU0 288 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 KLHL10Q6JEL2 608 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 FNBP4Q8N3X1 1017 aaPredicted RBP8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 NEDD1Q8NHV4 660 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 FAM71BQ8TC56 605 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 MTMR9Q96QG7 549 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 TSGA10Q9BZW7 698 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 TRIM9Q9C026 710 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 IGKV6D-41A0A0C4DH26 115 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 WTIPA6NIX2 430 aaPredicted RBP8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 TSPY2A6NKD2 308 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 SNHG28P0DPA3 235 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 CKAP4Q07065 602 aaKnown RBP8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 RIOX1Q9H6W3 641 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 LZTFL1Q9NQ48 299 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 RBBP6Q7Z6E9 1792 aaKnown RBP8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 EIF3JO75822 258 aaKnown RBP8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 OR52Z1P0C646 297 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 IL1R1P14778 569 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 CCT6AP40227 531 aaKnown RBP8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 UBXN1Q04323 297 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 HYIQ5T013 277 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 MMTAG2Q9BU76 263 aaKnown RBP8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 ZNF287Q9HBT7 754 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 SIK3Q9Y2K2 1263 aa8.09□□□□□ -1.11
LYSMD3-203ENST00000500869 GPR75-ASB3A0A0A6YYF3 556 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 RBAK-RBAKDNI3L0D1 243 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 TFAP4Q01664 338 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 SEPT2Q15019 361 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 TMEM119Q4V9L6 283 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 FAM47AQ5JRC9 791 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 STAG2Q8N3U4 1231 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 NLRP3Q96P20 1036 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 NUP88Q99567 741 aaPredicted RBP8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 ZNHIT6Q9NWK9 470 aaKnown RBP8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 LUC7L2Q9Y383 392 aaKnown RBP8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 CCDC194A0A1B0GVG4 234 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 hCG_1642624A0A1W2PR95 340 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 CYLC1P35663 651 aaPredicted RBP8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 MARSP56192 900 aaKnown RBP8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 GPS2Q13227 327 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 MAPK8IP2Q13387 824 aaPredicted RBP8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 GRAPQ13588 217 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 KIF4BQ2VIQ3 1234 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 MMGT1Q8N4V1 131 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 CCDC155Q8N6L0 562 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 GOLGA5Q8TBA6 731 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 GRAPLQ8TC17 118 aaPredicted RBP8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 TMEM47Q9BQJ4 181 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 TSPYL1Q9H0U9 437 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 VPS16Q9H269 839 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 EPC1Q9H2F5 836 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 ANKRD31Q8N7Z5 1873 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 LDHCP07864 332 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 ATP2B1P20020 1258 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 VAV2P52735 878 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 VSNL1P62760 191 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 PSMD2Q13200 908 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 PDIA5Q14554 519 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 CHP1Q99653 195 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 ABCB6Q9NP58 842 aa8.08□□□□□ -1.12
LYSMD3-203ENST00000500869 NPHP1O15259 732 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 ABL1P00519 1130 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 USP17L8P0C7I0 530 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 CDC25AP30304 524 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 AMPD3Q01432 767 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 NONOQ15233 471 aaKnown RBP eCLIP8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 CABP7Q86V35 215 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 SYN2Q92777 582 aaPredicted RBP8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 PLAGL2Q9UPG8 496 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 EDIL3O43854 480 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 PRPF6O94906 941 aaKnown RBP8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 BAG3O95817 575 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 PLCG1P19174 1290 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 GNA11P29992 359 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 CLK2P49760 499 aaKnown RBP8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 LRRC63Q05C16 580 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 VPS72Q15906 364 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 ASTE1Q2TB18 679 aaPredicted RBP8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 CRY2Q49AN0 593 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 UNC13DQ70J99 1090 aa8.07□□□□□ -1.12
LYSMD3-203ENST00000500869 PROM2Q8N271 834 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms