RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 TCP1P17987 556 aaKnown RBP12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 KRT33BQ14525 404 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 DDIT3P35638 169 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 GNGT1P63211 74 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 PARVGQ9HBI0 331 aa12.16□□□□□ -0.46
AC055713.1-201ENST00000498967 LRPPRCP42704 1394 aaKnown RBP12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 DCTN3O75935 186 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 PAK1Q13153 545 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 TADA2BQ86TJ2 420 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 USP26Q9BXU7 913 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 ARHGEF10LQ9HCE6 1279 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 HESX1Q9UBX0 185 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 CPSF3Q9UKF6 684 aaKnown RBP12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 SPAG7O75391 227 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 ALDH1L1O75891 902 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 OTUD6AQ7L8S5 288 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 RRM2BQ7LG56 351 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 MYLK4Q86YV6 388 aaPredicted RBP12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 MYRIPQ8NFW9 859 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 NDEL1Q9GZM8 345 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 CYTH1Q15438 398 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 GRAMD1BQ3KR37 738 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 DCLK2Q8N568 766 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 N4BP2L2Q92802 583 aaPredicted RBP12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 SELENONQ9NZV5 590 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 IL16Q14005 1332 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 MCTP2Q6DN12 878 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 KDM4CQ9H3R0 1056 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 FAM135AQ9P2D6 1515 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 RAPGEF3O95398 923 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 F13A1P00488 732 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 U2AF2P26368 475 aaKnown RBP eCLIP12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 MORF4L2Q15014 288 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 CNBD2Q96M20 576 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 FOXP3Q9BZS1 431 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 PTPN23Q9H3S7 1636 aa12.15□□□□□ -0.46
AC055713.1-201ENST00000498967 YARSP54577 528 aaKnown RBP12.15□□□□□ -0.47
AC055713.1-201ENST00000498967 TMC2Q8TDI7 906 aa12.15□□□□□ -0.47
AC055713.1-201ENST00000498967 KLC2Q9H0B6 622 aa12.15□□□□□ -0.47
AC055713.1-201ENST00000498967 UBN1Q9NPG3 1134 aa12.15□□□□□ -0.47
AC055713.1-201ENST00000498967 PICK1Q9NRD5 415 aa12.15□□□□□ -0.47
AC055713.1-201ENST00000498967 MRGBPQ9NV56 204 aa12.15□□□□□ -0.47
AC055713.1-201ENST00000498967 TRAF7Q6Q0C0 670 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 AHI1Q8N157 1196 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 TRIM11Q96F44 468 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 LZTS2Q9BRK4 669 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 SEPT3Q9UH03 358 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 XRCC5P13010 732 aaKnown RBP12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 ABCD1P33897 745 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 TMED10P49755 219 aaKnown RBP12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 VPS39Q96JC1 886 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 TEX28O15482 410 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 PMLP29590 882 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 RUNX1T1Q06455 604 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 FSCBQ5H9T9 825 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 KLHL7Q8IXQ5 586 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 TAGAPQ8N103 731 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 STAMBPL1Q96FJ0 436 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 SMYD2Q9NRG4 433 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 BLOC1S6Q9UL45 172 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 DNM3Q9UQ16 869 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 CCDC151A5D8V7 595 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 MYD88Q99836 296 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 CUEDC2Q9H467 287 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 MAPK13O15264 365 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 BPIFB4P59827 614 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 FAM83GA6ND36 823 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 RPSAP08865 295 aaKnown RBP12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 CDH2P19022 906 aaPredicted RBP12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 RNASE9P60153 205 aaKnown RBP12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 WAPLQ7Z5K2 1190 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 SLC17A8Q8NDX2 589 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 ABCF3Q9NUQ8 709 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 PARP1P09874 1014 aaKnown RBP12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 SRGAP2CP0DJJ0 459 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 NDUFA5Q16718 116 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 NT5C3AQ9H0P0 336 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 RPRD1BQ9NQG5 326 aaKnown RBP12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 STOML1Q9UBI4 398 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 L3MBTL1Q9Y468 752 aa12.14□□□□□ -0.47
AC055713.1-201ENST00000498967 NESP48681 1621 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 DHX9Q08211 1270 aaKnown RBP12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 PDE4DQ08499 809 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 SNX19Q92543 992 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 MBIPQ9NS73 344 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 NOP53Q9NZM5 478 aaKnown RBP12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 HAND2P61296 217 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 POTEEQ6S8J3 1075 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 ANGPTL8Q6UXH0 198 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 SIKE1Q9BRV8 207 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 NCOA1Q15788 1441 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 SCAF11Q99590 1463 aaKnown RBP12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 ADCY3O60266 1144 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 BRD1O95696 1058 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 AOC3Q16853 763 aa12.13□□□□□ -0.47
AC055713.1-201ENST00000498967 MMS22LQ6ZRQ5 1243 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms