RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 IGBP1P78318 339 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 FOXO4P98177 505 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 CWF19L2Q2TBE0 894 aaKnown RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 TTC39BQ5VTQ0 682 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 ZNF530Q6P9A1 599 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 CCAR1Q8IX12 1150 aaKnown RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 KBTBD3Q8NAB2 608 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 SPC24Q8NBT2 197 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 ZCRB1Q8TBF4 217 aaKnown RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 EAF1Q96JC9 268 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 ZNF396Q96N95 335 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 ZIC5Q96T25 663 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 TRIM56Q9BRZ2 755 aaKnown RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 CCDC8Q9H0W5 538 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 HSD3B7Q9H2F3 369 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 C11orf16Q9NQ32 467 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 GINM1Q9NU53 330 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 TUBE1Q9UJT0 475 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 ABCC12Q96J65 1359 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 IKBKBO14920 756 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 YEATS4O95619 227 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 EDN3P14138 238 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 ETFBP38117 255 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 FCGRTP55899 365 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 MAP3K10Q02779 954 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 TERF2Q15554 542 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 CAMK4Q16566 473 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 SPRYD7Q5W111 196 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 ATG9AQ7Z3C6 839 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 FCHSD1Q86WN1 690 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 USHBP1Q8N6Y0 703 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 ZNF296Q8WUU4 475 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 NT5C1AQ9BXI3 368 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 OXCT2Q9BYC2 517 aaPredicted RBP4.52□□□□□ -1.69
CLTC-209ENST00000498711 TRIM5Q9C035 493 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 BOLA2Q9H3K6 86 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 KCNQ5Q9NR82 932 aa4.52□□□□□ -1.69
CLTC-209ENST00000498711 NID2Q14112 1375 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 ITGB4P16144 1822 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 AFDNP55196 1824 aaKnown RBP4.51□□□□□ -1.69
CLTC-209ENST00000498711 A0A1B0GTH6 734 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 PRAMEF22A3QJZ6 481 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 USP27XA6NNY8 438 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 SPINT1O43278 529 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 CIAO1O76071 339 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 ZRANB2O95218 330 aaKnown RBP eCLIP4.51□□□□□ -1.69
CLTC-209ENST00000498711 ANXA1P04083 346 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 PDIA3P30101 505 aaKnown RBP4.51□□□□□ -1.69
CLTC-209ENST00000498711 NLRP12P59046 1061 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 TEFQ10587 303 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 RAB33AQ14088 237 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 WDR44Q5JSH3 913 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 AXDND1Q5T1B0 1012 aaPredicted RBP4.51□□□□□ -1.69
CLTC-209ENST00000498711 ZNF697Q5TEC3 545 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 E4F1Q66K89 784 aaPredicted RBP4.51□□□□□ -1.69
CLTC-209ENST00000498711 SV2BQ7L1I2 683 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 LINC00301Q8NCQ3 95 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 CCDC112Q8NEF3 446 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 RHOVQ96L33 236 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 CAMKK2Q96RR4 588 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 USP28Q96RU2 1077 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 FSD1Q9BTV5 496 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 BRINP2Q9C0B6 783 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 SLC52A2Q9HAB3 445 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 PLA2G2EQ9NZK7 142 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 HPSEQ9Y251 543 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 A0A1W2PP55 124 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 CCDC69A6NI79 296 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 FAM177BA6PVY3 158 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 FOXP2O15409 715 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 KLF4O43474 513 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 FOXC1Q12948 553 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 OS9Q13438 667 aaPredicted RBP4.51□□□□□ -1.69
CLTC-209ENST00000498711 CTC1Q2NKJ3 1217 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 MPRIPQ6WCQ1 1025 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 FERMT3Q86UX7 667 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 MSL3Q8N5Y2 521 aaKnown RBP4.51□□□□□ -1.69
CLTC-209ENST00000498711 CCDC150Q8NCX0 1101 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 MICAL1Q8TDZ2 1067 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 CEP63Q96MT8 703 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 LATS2Q9NRM7 1088 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 ZNF446Q9NWS9 450 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 PCDHA7Q9UN72 937 aa4.51□□□□□ -1.69
CLTC-209ENST00000498711 PHLPP2Q6ZVD8 1323 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 PTPDC1A2A3K4 754 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 SLU7O95391 586 aaKnown RBP4.5□□□□□ -1.69
CLTC-209ENST00000498711 SKILP12757 684 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 TFCP2Q12800 502 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 POU4F2Q12837 409 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 TBX2Q13207 712 aaPredicted RBP4.5□□□□□ -1.69
CLTC-209ENST00000498711 PTPN14Q15678 1187 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 TPD52L1Q16890 204 aaPredicted RBP4.5□□□□□ -1.69
CLTC-209ENST00000498711 PEAR1Q5VY43 1037 aaPredicted RBP4.5□□□□□ -1.69
CLTC-209ENST00000498711 ARMCX5Q6P1M9 558 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 FBXL19Q6PCT2 694 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 ZNF790Q6PG37 636 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 TRIM65Q6PJ69 517 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 DTHD1Q6ZMT9 781 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 CPLX3Q8WVH0 158 aa4.5□□□□□ -1.69
CLTC-209ENST00000498711 HNRNPLLQ8WVV9 542 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms