RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 BTBD7Q9P203 1132 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 KIAA1217Q5T5P2 1943 aa6.11□□□□□ -1.43
CSTF1-207ENST00000498689 FLNCQ14315 2725 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 GRIN2DO15399 1336 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 KIF16BQ96L93 1317 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 SETD2Q9BYW2 2564 aaPredicted RBP6.1□□□□□ -1.43
CSTF1-207ENST00000498689 A0A1B0GUL7 405 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 DDTLA6NHG4 134 aaPredicted RBP6.1□□□□□ -1.43
CSTF1-207ENST00000498689 MOXD2PA6NHM9 499 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 SMAPO00193 183 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 ADCY6O43306 1168 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 B4GALT4O60513 344 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 GLRX3O76003 335 aaKnown RBP6.1□□□□□ -1.43
CSTF1-207ENST00000498689 NPR3P17342 541 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 GYG1P46976 350 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 CLCN5P51795 746 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 HDLBPQ00341 1268 aaKnown RBP6.1□□□□□ -1.43
CSTF1-207ENST00000498689 MAP3K10Q02779 954 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 SRSF1Q07955 248 aaKnown RBP eCLIP6.1□□□□□ -1.43
CSTF1-207ENST00000498689 CAMK2BQ13554 666 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 SHROOM1Q2M3G4 852 aaPredicted RBP6.1□□□□□ -1.43
CSTF1-207ENST00000498689 TSR1Q2NL82 804 aaKnown RBP6.1□□□□□ -1.43
CSTF1-207ENST00000498689 PDZD3Q86UT5 571 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 PACS2Q86VP3 889 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 KREMEN2Q8NCW0 462 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 FLCNQ8NFG4 579 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 CDCA7LQ96GN5 454 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 MSLNLQ96KJ4 702 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 GLT1D1Q96MS3 346 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 POLR3GLQ9BT43 218 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 IGFLR1Q9H665 355 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 PANK3Q9H999 370 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 CHPF2Q9P2E5 772 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 NCDNQ9UBB6 729 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 IVNS1ABPQ9Y6Y0 642 aa6.1□□□□□ -1.43
CSTF1-207ENST00000498689 LRBAP50851 2863 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 ARHGAP6O43182 974 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 EYA4O95677 639 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 ZNF865P0CJ78 1059 aaPredicted RBP6.09□□□□□ -1.43
CSTF1-207ENST00000498689 PLA2G2AP14555 144 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 SPINK2P20155 84 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 IGHMBP2P38935 993 aaKnown RBP6.09□□□□□ -1.43
CSTF1-207ENST00000498689 PPP4CP60510 307 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 WDR5P61964 334 aaKnown RBP6.09□□□□□ -1.43
CSTF1-207ENST00000498689 LMNB2Q03252 620 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 CHAF1AQ13111 956 aaPredicted RBP6.09□□□□□ -1.43
CSTF1-207ENST00000498689 KRT24Q2M2I5 525 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 TCTN1Q2MV58 587 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 FAM117BQ6P1L5 589 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 ZBTB33Q86T24 672 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 ZGPATQ8N5A5 531 aaKnown RBP6.09□□□□□ -1.43
CSTF1-207ENST00000498689 MAML3Q96JK9 1138 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 MYD88Q99836 296 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 KCNK4Q9NYG8 393 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 CLEC1BQ9P126 229 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 USP18Q9UMW8 372 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 USP15Q9Y4E8 981 aaPredicted RBP6.09□□□□□ -1.43
CSTF1-207ENST00000498689 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.09□□□□□ -1.43
CSTF1-207ENST00000498689 CREBBPQ92793 2442 aa6.09□□□□□ -1.43
CSTF1-207ENST00000498689 ROBO3Q96MS0 1386 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 SLC30A4O14863 429 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 C1QL1O75973 258 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 CSPG5O95196 566 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 CYP2C9P11712 490 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 AOC1P19801 751 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 ITGA6P23229 1130 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 JAG1P78504 1218 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 PTPROQ16827 1216 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 EPC2Q52LR7 807 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 SMRP1Q8NCR6 262 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 PHF7Q9BWX1 381 aaPredicted RBP6.08□□□□□ -1.44
CSTF1-207ENST00000498689 MFSD1Q9H3U5 465 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 ZFHX3Q15911 3703 aa6.08□□□□□ -1.44
CSTF1-207ENST00000498689 ITPR2Q14571 2701 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.07□□□□□ -1.44
CSTF1-207ENST00000498689 CTAGE5O15320 804 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 PLIN1O60240 522 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 RNF40O75150 1001 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 TOP3BO95985 862 aaKnown RBP6.07□□□□□ -1.44
CSTF1-207ENST00000498689 PFKMP08237 780 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 C6orf222P0C671 652 aaPredicted RBP6.07□□□□□ -1.44
CSTF1-207ENST00000498689 SP9P0CG40 484 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 ACTN1P12814 892 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 RGS3P49796 1198 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 BACE1P56817 501 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 ADAM15Q13444 863 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 GPM6BQ13491 265 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 DIXDC1Q155Q3 683 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 HHIPL2Q6UWX4 724 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 SLC43A3Q8NBI5 491 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 ZCCHC14Q8WYQ9 949 aaKnown RBP6.07□□□□□ -1.44
CSTF1-207ENST00000498689 FAM84BQ96KN1 310 aaPredicted RBP6.07□□□□□ -1.44
CSTF1-207ENST00000498689 MPHOSPH8Q99549 860 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 CTNNA3Q9UI47 895 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 RABGAP1Q9Y3P9 1069 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 SDK1Q7Z5N4 2213 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 DENND4AQ7Z401 1863 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 NAV1Q8NEY1 1877 aa6.07□□□□□ -1.44
CSTF1-207ENST00000498689 FOCADQ5VW36 1801 aa6.06□□□□□ -1.44
CSTF1-207ENST00000498689 SCN10AQ9Y5Y9 1956 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms