RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 MKNK2Q9HBH9 465 aa18.4■□□□□ 0.54
COL6A1-206ENST00000498614 TRIM10Q9UDY6 481 aa18.4■□□□□ 0.54
COL6A1-206ENST00000498614 MKRN1Q9UHC7 482 aaKnown RBP18.4■□□□□ 0.54
COL6A1-206ENST00000498614 MYO6Q9UM54 1294 aa18.4■□□□□ 0.54
COL6A1-206ENST00000498614 TRAPPC10P48553 1259 aa18.4■□□□□ 0.54
COL6A1-206ENST00000498614 CYP26C1Q6V0L0 522 aa18.4■□□□□ 0.54
COL6A1-206ENST00000498614 SLC44A5Q8NCS7 719 aa18.4■□□□□ 0.54
COL6A1-206ENST00000498614 ATF5Q9Y2D1 282 aaPredicted RBP18.4■□□□□ 0.54
COL6A1-206ENST00000498614 COPB1P53618 953 aaKnown RBP18.39■□□□□ 0.53
COL6A1-206ENST00000498614 RRAGBQ5VZM2 374 aa18.39■□□□□ 0.53
COL6A1-206ENST00000498614 PDXDC2PQ6P474 469 aa18.39■□□□□ 0.53
COL6A1-206ENST00000498614 TGFBRAP1Q8WUH2 860 aa18.39■□□□□ 0.53
COL6A1-206ENST00000498614 CHP1Q99653 195 aa18.39■□□□□ 0.53
COL6A1-206ENST00000498614 MTRQ99707 1265 aa18.39■□□□□ 0.53
COL6A1-206ENST00000498614 GBP3Q9H0R5 595 aa18.39■□□□□ 0.53
COL6A1-206ENST00000498614 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
COL6A1-206ENST00000498614 DGKHQ86XP1 1220 aa18.39■□□□□ 0.53
COL6A1-206ENST00000498614 RPGRQ92834 1020 aaKnown RBP18.39■□□□□ 0.53
COL6A1-206ENST00000498614 MYO1AQ9UBC5 1043 aa18.39■□□□□ 0.53
COL6A1-206ENST00000498614 REXO2Q9Y3B8 237 aaKnown RBP18.39■□□□□ 0.53
COL6A1-206ENST00000498614 LRRC10BA6NIK2 292 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 CALML3P27482 149 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 KRT9P35527 623 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 WDR66Q8TBY9 1149 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 FAM71BQ8TC56 605 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 RSPH14Q9UHP6 348 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 SAP30BPQ9UHR5 308 aaKnown RBP18.38■□□□□ 0.53
COL6A1-206ENST00000498614 MYH8P13535 1937 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 RPS6KA5O75582 802 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 IVLP07476 585 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 TSPY3P0CV98 308 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 TSPY8P0CW00 308 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 GRAPQ13588 217 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 HSP90B2PQ58FF3 399 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 GRAPLQ8TC17 118 aaPredicted RBP18.38■□□□□ 0.53
COL6A1-206ENST00000498614 MAD2L2Q9UI95 211 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 PCDHA4Q9UN74 947 aa18.38■□□□□ 0.53
COL6A1-206ENST00000498614 SLC35G1Q2M3R5 365 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 TCP11X2Q5H9J9 407 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 MAPKAPK5Q8IW41 473 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 C4orf32Q8N8J7 132 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 RNF216Q9NWF9 866 aaPredicted RBP18.37■□□□□ 0.53
COL6A1-206ENST00000498614 RWDD2AQ9UIY3 292 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 KCNJ18B7U540 433 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 KCNJ12Q14500 433 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 GRM4Q14833 912 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 WDR93Q6P2C0 686 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 HDAC6Q9UBN7 1215 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 GUCA1BQ9UMX6 200 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 STX8Q9UNK0 236 aa18.37■□□□□ 0.53
COL6A1-206ENST00000498614 ENC1O14682 589 aa18.36■□□□□ 0.53
COL6A1-206ENST00000498614 GTPBP6O43824 516 aaPredicted RBP18.36■□□□□ 0.53
COL6A1-206ENST00000498614 PAK1Q13153 545 aa18.36■□□□□ 0.53
COL6A1-206ENST00000498614 CRY2Q49AN0 593 aa18.36■□□□□ 0.53
COL6A1-206ENST00000498614 HEATR3Q7Z4Q2 680 aa18.36■□□□□ 0.53
COL6A1-206ENST00000498614 AMOTL1Q8IY63 956 aa18.36■□□□□ 0.53
COL6A1-206ENST00000498614 ZNF444Q8N0Y2 327 aaPredicted RBP18.36■□□□□ 0.53
COL6A1-206ENST00000498614 NELFBQ8WX92 580 aa18.36■□□□□ 0.53
COL6A1-206ENST00000498614 LEMD3Q9Y2U8 911 aa18.36■□□□□ 0.53
COL6A1-206ENST00000498614 EPN1Q9Y6I3 576 aaPredicted RBP18.36■□□□□ 0.53
COL6A1-206ENST00000498614 NAV1Q8NEY1 1877 aa18.36■□□□□ 0.53
COL6A1-206ENST00000498614 CCDC194A0A1B0GVG4 234 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 CYTH3O43739 400 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 BAG3O95817 575 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 TUBBP07437 444 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 TMED8Q6PL24 325 aaPredicted RBP18.35■□□□□ 0.53
COL6A1-206ENST00000498614 TRAPPC11Q7Z392 1133 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 FAM204AQ9H8W3 233 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 TFR2Q9UP52 801 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 MAPK8IP1Q9UQF2 711 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 NDUFA10O95299 355 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 GOLGA8HP0CJ92 632 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 CHRNA5P30532 468 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 LONP1P36776 959 aaKnown RBP18.35■□□□□ 0.53
COL6A1-206ENST00000498614 TRIM14Q14142 442 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 ARL6IP4Q66PJ3 421 aaKnown RBP18.35■□□□□ 0.53
COL6A1-206ENST00000498614 LRRC31Q6UY01 552 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 SH3GLB2Q9NR46 395 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 ROBO3Q96MS0 1386 aa18.35■□□□□ 0.53
COL6A1-206ENST00000498614 PP2D1A8MPX8 630 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 STAT6P42226 847 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 GSTO1P78417 241 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 UBXN1Q04323 297 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 SPAG1Q07617 926 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 INF2Q27J81 1249 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 ZNF804AQ7Z570 1209 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 CCDC148Q8NFR7 591 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 ANKS1AQ92625 1134 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 TMEM47Q9BQJ4 181 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 CPVLQ9H3G5 476 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 PCDHA6Q9UN73 950 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 GDAQ9Y2T3 454 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 PCDHA8Q9Y5H6 950 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 RPN1P04843 607 aaKnown RBP18.34■□□□□ 0.53
COL6A1-206ENST00000498614 TNNT3P45378 269 aaPredicted RBP18.34■□□□□ 0.53
COL6A1-206ENST00000498614 USP14P54578 494 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 PYM1Q9BRP8 204 aaKnown RBP18.34■□□□□ 0.53
COL6A1-206ENST00000498614 TMEM60Q9H2L4 133 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 MED4Q9NPJ6 270 aa18.34■□□□□ 0.53
COL6A1-206ENST00000498614 TTC26A0AVF1 554 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms