RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 NUBP1P53384 320 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 GABPAQ06546 454 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 SMAD2Q15796 467 aaKnown RBP10.9□□□□□ -0.66
FAM3D-205ENST00000498347 IQSEC1Q6DN90 963 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 ARMCX2Q7L311 632 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 ASCL5Q7RTU5 278 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 FBXO22Q8NEZ5 403 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 REPS2Q8NFH8 660 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 DDRGK1Q96HY6 314 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 CRBNQ96SW2 442 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 TEX13BQ9BXU2 312 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 KATNBL1Q9H079 304 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 ALG13Q9NP73 1137 aaKnown RBP10.9□□□□□ -0.66
FAM3D-205ENST00000498347 TRMT13Q9NUP7 481 aaKnown RBP10.9□□□□□ -0.66
FAM3D-205ENST00000498347 FBXO28Q9NVF7 368 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 PPP1R9AQ9ULJ8 1098 aa10.9□□□□□ -0.66
FAM3D-205ENST00000498347 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.89□□□□□ -0.67
FAM3D-205ENST00000498347 LINC01553A4QN01 128 aa10.89□□□□□ -0.67
FAM3D-205ENST00000498347 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
FAM3D-205ENST00000498347 CYP2E1P05181 493 aaPredicted RBP10.89□□□□□ -0.67
FAM3D-205ENST00000498347 BFSP2Q13515 415 aa10.89□□□□□ -0.67
FAM3D-205ENST00000498347 COL19A1Q14993 1142 aa10.89□□□□□ -0.67
FAM3D-205ENST00000498347 TLK2Q86UE8 772 aa10.89□□□□□ -0.67
FAM3D-205ENST00000498347 CCDC144CPQ8IYA2 1237 aa10.89□□□□□ -0.67
FAM3D-205ENST00000498347 ANKRD35Q8N283 1001 aa10.89□□□□□ -0.67
FAM3D-205ENST00000498347 BANK1Q8NDB2 785 aa10.89□□□□□ -0.67
FAM3D-205ENST00000498347 BACH2Q9BYV9 841 aa10.89□□□□□ -0.67
FAM3D-205ENST00000498347 SALL2Q9Y467 1007 aaPredicted RBP10.89□□□□□ -0.67
FAM3D-205ENST00000498347 TPRP12270 2363 aaKnown RBP10.88□□□□□ -0.67
FAM3D-205ENST00000498347 H0Y858 1186 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 GJB5O95377 273 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 SLC4A3P48751 1232 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 WDR5P61964 334 aaKnown RBP10.88□□□□□ -0.67
FAM3D-205ENST00000498347 ZXDAP98168 799 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 TIGD5Q53EQ6 642 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 CCDC158Q5M9N0 1113 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 SNRNP48Q6IEG0 339 aaKnown RBP10.88□□□□□ -0.67
FAM3D-205ENST00000498347 MIGA1Q8NAN2 632 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 EXOC6Q8TAG9 804 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.88□□□□□ -0.67
FAM3D-205ENST00000498347 FSD1Q9BTV5 496 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 TLR9Q9NR96 1032 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 RIPK3Q9Y572 518 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.88□□□□□ -0.67
FAM3D-205ENST00000498347 EPG5Q9HCE0 2579 aa10.88□□□□□ -0.67
FAM3D-205ENST00000498347 PRR23AA6NEV1 266 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 STXBP3O00186 592 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 SMPD1P17405 629 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 PDE4AP27815 886 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 LRRFIP1Q32MZ4 808 aaKnown RBP10.87□□□□□ -0.67
FAM3D-205ENST00000498347 TCEAL5Q5H9L2 206 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 TTC39AQ5SRH9 613 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
FAM3D-205ENST00000498347 TMCO2Q7Z6W1 182 aaPredicted RBP10.87□□□□□ -0.67
FAM3D-205ENST00000498347 FGD4Q96M96 766 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 POLR3EQ9NVU0 708 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 CLDND1Q9NY35 253 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 FBXO40Q9UH90 709 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 INSL6Q9Y581 213 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 TRIOO75962 3097 aa10.87□□□□□ -0.67
FAM3D-205ENST00000498347 MYH1P12882 1939 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 ABHD14A-ACY1A0A1B0GW23 586 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 SOWAHBA6NEL2 793 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 ASB14A6NK59 587 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 ATP2A1O14983 1001 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 MBTPS2O43462 519 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 ZBED4O75132 1171 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 LTBRP36941 435 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 ICA1Q05084 483 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 TMED8Q6PL24 325 aaPredicted RBP10.86□□□□□ -0.67
FAM3D-205ENST00000498347 PRPF38AQ8NAV1 312 aaKnown RBP10.86□□□□□ -0.67
FAM3D-205ENST00000498347 CHST13Q8NET6 341 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 CCDC17Q96LX7 622 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 SAMD11Q96NU1 681 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 GOPCQ9HD26 462 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 GPHNQ9NQX3 736 aaPredicted RBP10.86□□□□□ -0.67
FAM3D-205ENST00000498347 SWAP70Q9UH65 585 aa10.86□□□□□ -0.67
FAM3D-205ENST00000498347 CTDP1Q9Y5B0 961 aaPredicted RBP10.86□□□□□ -0.67
FAM3D-205ENST00000498347 SCN5AQ14524 2016 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 TET1Q8NFU7 2136 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 SRGAP3O43295 1099 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 EFCAB14O75071 495 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 PARNO95453 639 aaKnown RBP10.85□□□□□ -0.67
FAM3D-205ENST00000498347 NBL1P41271 181 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 VCPP55072 806 aaKnown RBP10.85□□□□□ -0.67
FAM3D-205ENST00000498347 DEFB103AP81534 67 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 CNTN2Q02246 1040 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 SIGLEC14Q08ET2 396 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 G3BP1Q13283 466 aaKnown RBP eCLIP10.85□□□□□ -0.67
FAM3D-205ENST00000498347 CNKSR3Q6P9H4 555 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 CPXCR1Q8N123 301 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 ZNF512BQ96KM6 892 aaPredicted RBP10.85□□□□□ -0.67
FAM3D-205ENST00000498347 SLF1Q9BQI6 1058 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 C17orf80Q9BSJ5 609 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 NSUN3Q9H649 340 aaKnown RBP10.85□□□□□ -0.67
FAM3D-205ENST00000498347 KANSL2Q9H9L4 492 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 PIH1D3Q9NQM4 214 aaKnown RBP10.85□□□□□ -0.67
FAM3D-205ENST00000498347 MCM9Q9NXL9 1143 aa10.85□□□□□ -0.67
FAM3D-205ENST00000498347 CHD8Q9HCK8 2581 aa10.84□□□□□ -0.67
FAM3D-205ENST00000498347 MYO7AQ13402 2215 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms