RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 USP17L18D6R9N7 530 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 USP17L22D6RA61 530 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 USP17L17D6RBQ6 530 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 USP17L19D6RCP7 530 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 USP17L20D6RJB6 530 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 NEMFO60524 1076 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 USP17L24Q0WX57 530 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 PNOCQ13519 176 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 USP17L6PQ6QN14 398 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 C11orf57Q6ZUT1 292 aaPredicted RBP20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 ZKSCAN4Q969J2 545 aaPredicted RBP20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 HOOK2Q96ED9 719 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 FBXO28Q9NVF7 368 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 SERTAD1Q9UHV2 236 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 DHX58Q96C10 678 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 PPP2R3BQ9Y5P8 575 aa20.22■□□□□ 0.83
CHRNA4-206ENST00000498043 BIN1O00499 593 aa20.21■□□□□ 0.83
CHRNA4-206ENST00000498043 FOXN1O15353 648 aa20.21■□□□□ 0.83
CHRNA4-206ENST00000498043 CCDC174Q6PII3 467 aa20.21■□□□□ 0.83
CHRNA4-206ENST00000498043 LUZP1Q86V48 1076 aa20.21■□□□□ 0.83
CHRNA4-206ENST00000498043 SCYL3Q8IZE3 742 aa20.21■□□□□ 0.83
CHRNA4-206ENST00000498043 CHURC1Q8WUH1 139 aa20.21■□□□□ 0.83
CHRNA4-206ENST00000498043 CBX8Q9HC52 389 aa20.21■□□□□ 0.83
CHRNA4-206ENST00000498043 GINM1Q9NU53 330 aa20.21■□□□□ 0.83
CHRNA4-206ENST00000498043 LAD1O00515 517 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 ACTN4O43707 911 aaKnown RBP20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 TDP2O95551 362 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 OR52Z1P0C646 297 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 MTMR2Q13614 643 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 ZRSR1Q15695 479 aaKnown RBP20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 DTHD1Q6ZMT9 781 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 POTEDQ86YR6 584 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 GLT8D2Q9H1C3 349 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 LONP1P36776 959 aaKnown RBP20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 ZNF165P49910 485 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 FAM160B2Q86V87 743 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 GRAMD1CQ8IYS0 662 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 KIAA1683Q9H0B3 1180 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 ANO10Q9NW15 660 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 ZNF112Q9UJU3 913 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 FEM1BQ9UK73 627 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 SMCHD1A6NHR9 2005 aa20.2■□□□□ 0.82
CHRNA4-206ENST00000498043 PITPNM2Q9BZ72 1349 aa20.19■□□□□ 0.82
CHRNA4-206ENST00000498043 CCDC173Q0VFZ6 552 aa20.19■□□□□ 0.82
CHRNA4-206ENST00000498043 UVSSAQ2YD98 709 aa20.19■□□□□ 0.82
CHRNA4-206ENST00000498043 DLK2Q6UY11 383 aa20.19■□□□□ 0.82
CHRNA4-206ENST00000498043 RANBP17Q9H2T7 1088 aaKnown RBP20.19■□□□□ 0.82
CHRNA4-206ENST00000498043 USP25Q9UHP3 1055 aa20.19■□□□□ 0.82
CHRNA4-206ENST00000498043 MEIS2O14770 477 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 SLC37A4O43826 429 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 EDIL3O43854 480 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 CDC25AP30304 524 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 PRPHP41219 470 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 PRKG1Q13976 671 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 LPAR1Q92633 364 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 PICK1Q9NRD5 415 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 PHIPQ8WWQ0 1821 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 PP2D1A8MPX8 630 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 WDR46O15213 610 aaKnown RBP20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 PRR29P0C7W0 189 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 POSTNQ15063 836 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 GPR162Q16538 588 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 DPCR1Q3MIW9 517 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 ANO3Q9BYT9 981 aa20.18■□□□□ 0.82
CHRNA4-206ENST00000498043 ADM5C9JUS6 153 aa20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 OPLAHO14841 1288 aa20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 PLA2G6O60733 806 aa20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 SPP2Q13103 211 aa20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 ORC2Q13416 577 aaPredicted RBP20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 ISM2Q6H9L7 571 aa20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 KLRG1Q96E93 195 aa20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 TANGO6Q9C0B7 1094 aa20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 HOOK1Q9UJC3 728 aaKnown RBP20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 PTPRAP18433 802 aa20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 TXLNAP40222 546 aa20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 DCPSQ96C86 337 aaKnown RBP20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 P2RX7Q99572 595 aaKnown RBP20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 TUBE1Q9UJT0 475 aa20.17■□□□□ 0.82
CHRNA4-206ENST00000498043 VCAM1P19320 739 aa20.16■□□□□ 0.82
CHRNA4-206ENST00000498043 HOXA13P31271 388 aaPredicted RBP20.16■□□□□ 0.82
CHRNA4-206ENST00000498043 PLCB2Q00722 1185 aa20.16■□□□□ 0.82
CHRNA4-206ENST00000498043 MDM2Q00987 491 aaPredicted RBP20.16■□□□□ 0.82
CHRNA4-206ENST00000498043 AP3B2Q13367 1082 aa20.16■□□□□ 0.82
CHRNA4-206ENST00000498043 CALCRLQ16602 461 aa20.16■□□□□ 0.82
CHRNA4-206ENST00000498043 SUPT20HL1Q3ZLR7 823 aa20.16■□□□□ 0.82
CHRNA4-206ENST00000498043 CEP57L1Q8IYX8 460 aa20.16■□□□□ 0.82
CHRNA4-206ENST00000498043 OTOFQ9HC10 1997 aa20.16■□□□□ 0.82
CHRNA4-206ENST00000498043 CAVIN2O95810 425 aa20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 SLFN14P0C7P3 912 aa20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 DPY19L2Q6NUT2 758 aa20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 SULF1Q8IWU6 871 aa20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 PPP1R9BQ96SB3 815 aa20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 EMILIN3Q9NT22 766 aa20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 PCDHA5Q9Y5H7 936 aa20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 NLRP12P59046 1061 aa20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 KARSQ15046 597 aaKnown RBP20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 KANK3Q6NY19 840 aa20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 ELOA2Q8IYF1 753 aaPredicted RBP20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 RASSF8Q8NHQ8 419 aa20.15■□□□□ 0.82
CHRNA4-206ENST00000498043 SLF1Q9BQI6 1058 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms