RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 KIAA0355O15063 1070 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 ICAM1P05362 532 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 SDSP20132 328 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 GJA9P57773 515 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 SNAP25P60880 206 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 HAND2P61296 217 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 NUCB1Q02818 461 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 SHHQ15465 462 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 AKNAD1Q5T1N1 836 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 FAM109BQ6ICB4 259 aaPredicted RBP13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 CCSAPQ6IQ19 270 aaPredicted RBP13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 NOL8Q76FK4 1167 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 ANKRD33Q7Z3H0 272 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 TTC14Q96N46 770 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 TOX2Q96NM4 488 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 TMEM47Q9BQJ4 181 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 UPF3AQ9H1J1 476 aaKnown RBP13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 MTMR10Q9NXD2 777 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 ELP1O95163 1332 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 MROH7Q68CQ1 1323 aa13.85□□□□□ -0.19
NUDCD3-211ENST00000497978 SZT2Q5T011 3432 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 MYADML2A6NDP7 307 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 SOWAHBA6NEL2 793 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 HIP1O00291 1037 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 ASGR1P07306 291 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 SLC16A2P36021 539 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 TNFAIP2Q03169 654 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 GSE1Q14687 1217 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 MUM1L1Q5H9M0 696 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 SYDE2Q5VT97 1194 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 BTNL9Q6UXG8 535 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 NSMFQ6X4W1 530 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 RASGRP2Q7LDG7 609 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 PLEKHM2Q8IWE5 1019 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 RANBP17Q9H2T7 1088 aaKnown RBP13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 OSBPL3Q9H4L5 887 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 DIAPH3Q9NSV4 1193 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 CYP39A1Q9NYL5 469 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 PNMA2Q9UL42 364 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 STXBP5LQ9Y2K9 1186 aa13.84□□□□□ -0.19
NUDCD3-211ENST00000497978 A0A0U1RQG5 324 aaPredicted RBP13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 ZNF213O14771 459 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 ADCY6O43306 1168 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 IGHDP01880 384 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 NT5C2P49902 561 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 FPGSQ05932 587 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 FAAP100Q0VG06 881 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 C9orf50Q5SZB4 431 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 ZNF697Q5TEC3 545 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 TTBK2Q6IQ55 1244 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 EXOC6Q8TAG9 804 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 ESR2Q92731 530 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 KATNBL1Q9H079 304 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 AP5M1Q9H0R1 490 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 GPCPD1Q9NPB8 672 aa13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 FRMPD2Q68DX3 1309 aaPredicted RBP13.83□□□□□ -0.2
NUDCD3-211ENST00000497978 ZEB2O60315 1214 aa13.82□□□□□ -0.2
NUDCD3-211ENST00000497978 PDHBP11177 359 aa13.82□□□□□ -0.2
NUDCD3-211ENST00000497978 CCDC178Q5BJE1 867 aa13.82□□□□□ -0.2
NUDCD3-211ENST00000497978 IQSEC1Q6DN90 963 aa13.82□□□□□ -0.2
NUDCD3-211ENST00000497978 CWC27Q6UX04 472 aaKnown RBP13.82□□□□□ -0.2
NUDCD3-211ENST00000497978 TBC1D10CQ8IV04 446 aa13.82□□□□□ -0.2
NUDCD3-211ENST00000497978 FAM212AQ96EL1 285 aa13.82□□□□□ -0.2
NUDCD3-211ENST00000497978 ADD3Q9UEY8 706 aaKnown RBP13.82□□□□□ -0.2
NUDCD3-211ENST00000497978 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 PTPDC1A2A3K4 754 aa13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 ARVCFO00192 962 aa13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 TLR3O15455 904 aaKnown RBP13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 CABYRO75952 493 aa13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 ITGB8P26012 769 aa13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 NKX3-2P78367 333 aa13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 IRX5P78411 483 aaPredicted RBP13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 SMAD3P84022 425 aaKnown RBP13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 EEPD1Q7L9B9 569 aa13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 TLK2Q86UE8 772 aa13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 IQCA1Q86XH1 822 aa13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 RNPC3Q96LT9 517 aaKnown RBP13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 VTA1Q9NP79 307 aa13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 LAMA3Q16787 3333 aa13.81□□□□□ -0.2
NUDCD3-211ENST00000497978 LOC102724159A0A0B4J2E5 919 aa13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 DYNC1LI2O43237 492 aaPredicted RBP13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 TIMP1P01033 207 aa13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 CDK7P50613 346 aa13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 BEX3Q00994 111 aa13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 ZNF543Q08ER8 600 aa13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 BAATQ14032 418 aaPredicted RBP13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 PWP2Q15269 919 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 FSCN1Q16658 493 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 DGKHQ86XP1 1220 aa13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 FBXO16Q8IX29 292 aaPredicted RBP13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 FAM161BQ96MY7 647 aa13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 MPHOSPH6Q99547 160 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 CTNNA3Q9UI47 895 aa13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 GNEQ9Y223 722 aaKnown RBP13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 Q9Y3F1 56 aa13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 DNAH12Q6ZR08 3092 aa13.8□□□□□ -0.2
NUDCD3-211ENST00000497978 NFIBO00712 420 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms