RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	PP2D1	A8MPX8	630 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	MAGOH	P61326	146 aa	Known RBP	11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ASIC1	P78348	528 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	CDKAL1	Q5VV42	579 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	HAUS3	Q68CZ6	603 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ZNF790	Q6PG37	636 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	KIF2B	Q8N4N8	673 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	HPS3	Q969F9	1004 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	MAGOHB	Q96A72	148 aa	Known RBP	11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	SEC16B	Q96JE7	1060 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	BABAM1	Q9NWV8	329 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PIK3C2B	O00750	1634 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	SPATA31D1	Q6ZQQ2	1576 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ZNF532	Q9HCE3	1301 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PLEKHG3	A1L390	1219 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	FAM107A	O95990	144 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	KRT2	P35908	639 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	SCTR	P47872	440 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	RFX5	P48382	616 aa	Predicted RBP	11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	SARS	P49591	514 aa	Known RBP	11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	CRYM	Q14894	314 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	EARS2	Q5JPH6	523 aa	Known RBP	11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PAPD7	Q5XG87	772 aa	Known RBP	11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	CHADL	Q6NUI6	762 aa		11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	MSL3	Q8N5Y2	521 aa	Known RBP	11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	CCDC47	Q96A33	483 aa	Known RBP	11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ELAC2	Q9BQ52	826 aa	Known RBP	11.75	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	SNAP23	O00161	211 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PRKAB2	O43741	272 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	TAT	P17735	454 aa	Predicted RBP	11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	TCP1	P17987	556 aa	Known RBP	11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ESCO1	Q5FWF5	840 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	THEMIS2	Q5TEJ8	643 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	TTLL7	Q6ZT98	887 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	DNAAF5	Q86Y56	855 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	RASGRP4	Q8TDF6	673 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	UIMC1	Q96RL1	719 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	EXOC1	Q9NV70	894 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ABCF2	Q9UG63	623 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PCDHA13	Q9Y5I0	950 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	USP6	P35125	1406 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	KCNK3	O14649	394 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	DEXI	O95424	95 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PMS1	P54277	932 aa	Known RBP	11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	LDHAL6A	Q6ZMR3	332 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	CREG2	Q8IUH2	290 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	CCDC50	Q8IVM0	306 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	FAM89A	Q96GI7	184 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	MLXIPL	Q9NP71	852 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	CWC25	Q9NXE8	425 aa	Predicted RBP	11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	NRK	Q7Z2Y5	1582 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PALLD	Q8WX93	1383 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ZFY	P08048	801 aa	Predicted RBP	11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	SLCO1A2	P46721	670 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	KIF11	P52732	1056 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	GFPT1	Q06210	699 aa	Predicted RBP	11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PSMD2	Q13200	908 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	TCIRG1	Q13488	830 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	FAM228A	Q86W67	206 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	STAG1	Q8WVM7	1258 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	OSBPL7	Q9BZF2	842 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PPP1R12C	Q9BZL4	782 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	KANSL2	Q9H9L4	492 aa		11.74	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	WNT7A	O00755	349 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PDHA1	P08559	390 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PCK1	P35558	622 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ADCY1	Q08828	1119 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	WDR59	Q6PJI9	974 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	MAGEB6	Q8N7X4	407 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ANKS4B	Q8N8V4	417 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	LMBR1	Q8WVP7	490 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	NOX5	Q96PH1	765 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ZHX3	Q9H4I2	956 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ACTR5	Q9H9F9	607 aa	Predicted RBP	11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	STRN4	Q9NRL3	753 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PBX1	P40424	430 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PDE4D	Q08499	809 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	RBBP5	Q15291	538 aa	Known RBP	11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	NBPF9	Q3BBW0	867 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	CNOT6L	Q96LI5	555 aa	Known RBP	11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	SPAG5	Q96R06	1193 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	LEMD3	Q9Y2U8	911 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597		A6NNZ2	444 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	LGALS16	A8MUM7	142 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	FMNL1	O95466	1100 aa	Predicted RBP	11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ANP32D	O95626	131 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	DNM2	P50570	870 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	RBM5	P52756	815 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	IRX1	P78414	480 aa	Predicted RBP	11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	TUBB8	Q3ZCM7	444 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	ATG9A	Q7Z3C6	839 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	MARCH10	Q8NA82	808 aa	Predicted RBP	11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	PRCC	Q92733	491 aa	Predicted RBP	11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	TMEM87B	Q96K49	555 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	LY9	Q9HBG7	655 aa		11.73	□□□□□ -0.53
TRAPPC12-223	ENST00000497597	LIMA1	Q9UHB6	759 aa	Known RBP	11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms