RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 KRT2P35908 639 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 SLC16A2P36021 539 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 STAT2P52630 851 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 KRT85P78386 507 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 LACTBP83111 547 aaPredicted RBP16.3■□□□□ 0.2
VPS26A-209ENST00000497564 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
VPS26A-209ENST00000497564 PKN2Q16513 984 aaKnown RBP16.3■□□□□ 0.2
VPS26A-209ENST00000497564 FAM83BQ5T0W9 1011 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 SPICE1Q8N0Z3 855 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 PIBF1Q8WXW3 757 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 PARK7Q99497 189 aaKnown RBP16.3■□□□□ 0.2
VPS26A-209ENST00000497564 VAT1LQ9HCJ6 419 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 BRMS1Q9HCU9 246 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 FEM1BQ9UK73 627 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 A0A0G2JMZ2 1700 aa16.3■□□□□ 0.2
VPS26A-209ENST00000497564 TNRC18O15417 2968 aaPredicted RBP16.29■□□□□ 0.2
VPS26A-209ENST00000497564 SOX10P56693 466 aa16.29■□□□□ 0.2
VPS26A-209ENST00000497564 SH3D19Q5HYK7 790 aa16.29■□□□□ 0.2
VPS26A-209ENST00000497564 MYSM1Q5VVJ2 828 aa16.29■□□□□ 0.2
VPS26A-209ENST00000497564 TYW1BQ6NUM6 668 aa16.29■□□□□ 0.2
VPS26A-209ENST00000497564 HEATR3Q7Z4Q2 680 aa16.29■□□□□ 0.2
VPS26A-209ENST00000497564 HOMER1Q86YM7 354 aa16.29■□□□□ 0.2
VPS26A-209ENST00000497564 NOSTRINQ8IVI9 506 aa16.29■□□□□ 0.2
VPS26A-209ENST00000497564 PROCA1Q8NCQ7 364 aaPredicted RBP16.29■□□□□ 0.2
VPS26A-209ENST00000497564 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.22e-6■■□□□ 13
VPS26A-209ENST00000497564 ZNF396Q96N95 335 aaPredicted RBP16.29■□□□□ 0.2
VPS26A-209ENST00000497564 ZMYND12Q9H0C1 365 aa16.29■□□□□ 0.2
VPS26A-209ENST00000497564 EMILIN3Q9NT22 766 aa16.29■□□□□ 0.2
VPS26A-209ENST00000497564 PTPN22Q9Y2R2 807 aa16.29■□□□□ 0.2
VPS26A-209ENST00000497564 BTBD18B2RXH4 712 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 NLRP5P59047 1200 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 GNL2Q13823 731 aaKnown RBP16.28■□□□□ 0.2
VPS26A-209ENST00000497564 ZYXQ15942 572 aaKnown RBP16.28■□□□□ 0.2
VPS26A-209ENST00000497564 CDC37Q16543 378 aaPredicted RBP16.28■□□□□ 0.2
VPS26A-209ENST00000497564 CSPP1Q1MSJ5 1256 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 QRICH1Q2TAL8 776 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 FAM173BQ6P4H8 233 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 TNFRSF25Q93038 417 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 CHAMP1Q96JM3 812 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 TRIM47Q96LD4 638 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 SCAND2PQ9GZW5 306 aaPredicted RBP16.28■□□□□ 0.2
VPS26A-209ENST00000497564 CFAP45Q9UL16 551 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 PRR12Q9ULL5 1215 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 ISY1Q9ULR0 285 aaKnown RBP16.28■□□□□ 0.2
VPS26A-209ENST00000497564 PCDHA4Q9UN74 947 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 SLC45A1Q9Y2W3 748 aa16.28■□□□□ 0.2
VPS26A-209ENST00000497564 ELP1O95163 1332 aa16.27■□□□□ 0.2
VPS26A-209ENST00000497564 M0R2N6 131 aa16.27■□□□□ 0.2
VPS26A-209ENST00000497564 PEX10O60683 326 aa16.27■□□□□ 0.2
VPS26A-209ENST00000497564 PPP1R11O60927 126 aaPredicted RBP16.27■□□□□ 0.2
VPS26A-209ENST00000497564 VCAM1P19320 739 aa16.27■□□□□ 0.2
VPS26A-209ENST00000497564 NAPAP54920 295 aa16.27■□□□□ 0.2
VPS26A-209ENST00000497564 TRAF1Q13077 416 aa16.27■□□□□ 0.2
VPS26A-209ENST00000497564 FOXD4L6Q3SYB3 417 aaPredicted RBP16.27■□□□□ 0.2
VPS26A-209ENST00000497564 FOXD4L3Q6VB84 417 aaPredicted RBP16.27■□□□□ 0.2
VPS26A-209ENST00000497564 TEX2Q8IWB9 1127 aa16.27■□□□□ 0.2
VPS26A-209ENST00000497564 OXER1Q8TDS5 423 aa16.27■□□□□ 0.2
VPS26A-209ENST00000497564 ASCC2Q9H1I8 757 aaPredicted RBP16.27■□□□□ 0.2
VPS26A-209ENST00000497564 RANBP17Q9H2T7 1088 aaKnown RBP16.27■□□□□ 0.2
VPS26A-209ENST00000497564 LMBRD1Q9NUN5 540 aa16.27■□□□□ 0.2
VPS26A-209ENST00000497564 CNPY2Q9Y2B0 182 aa16.27■□□□□ 0.2
VPS26A-209ENST00000497564 PTCH2Q9Y6C5 1203 aa16.27■□□□□ 0.2
VPS26A-209ENST00000497564 GNA11P29992 359 aa16.26■□□□□ 0.19
VPS26A-209ENST00000497564 PSMC4P43686 418 aa16.26■□□□□ 0.19
VPS26A-209ENST00000497564 IKQ13123 557 aaPredicted RBP16.26■□□□□ 0.19
VPS26A-209ENST00000497564 NR5A1Q13285 461 aa16.26■□□□□ 0.19
VPS26A-209ENST00000497564 BLIDQ8IZY5 108 aa16.26■□□□□ 0.19
VPS26A-209ENST00000497564 SMCR8Q8TEV9 937 aaPredicted RBP16.26■□□□□ 0.19
VPS26A-209ENST00000497564 AMNQ9BXJ7 453 aa16.26■□□□□ 0.19
VPS26A-209ENST00000497564 C6orf50Q9HD87 102 aa16.26■□□□□ 0.19
VPS26A-209ENST00000497564 KIAA0100Q14667 2235 aaKnown RBP16.25■□□□□ 0.19
VPS26A-209ENST00000497564 FDX1P10109 184 aa16.25■□□□□ 0.19
VPS26A-209ENST00000497564 RILPL1Q5EBL4 403 aa16.25■□□□□ 0.19
VPS26A-209ENST00000497564 POTEEQ6S8J3 1075 aa16.25■□□□□ 0.19
VPS26A-209ENST00000497564 ANKRD13CQ8N6S4 541 aa16.25■□□□□ 0.19
VPS26A-209ENST00000497564 PRPF38AQ8NAV1 312 aaKnown RBP16.25■□□□□ 0.19
VPS26A-209ENST00000497564 BICD2Q8TD16 824 aa16.25■□□□□ 0.19
VPS26A-209ENST00000497564 SLF1Q9BQI6 1058 aa16.25■□□□□ 0.19
VPS26A-209ENST00000497564 GLT8D2Q9H1C3 349 aa16.25■□□□□ 0.19
VPS26A-209ENST00000497564 POLR3EQ9NVU0 708 aa16.25■□□□□ 0.19
VPS26A-209ENST00000497564 RTEL1Q9NZ71 1219 aa16.25■□□□□ 0.19
VPS26A-209ENST00000497564 SMCO2A6NFE2 343 aa16.24■□□□□ 0.19
VPS26A-209ENST00000497564 FIBPO43427 364 aa16.24■□□□□ 0.19
VPS26A-209ENST00000497564 NCLP19338 710 aaKnown RBP16.24■□□□□ 0.19
VPS26A-209ENST00000497564 OSBPP22059 807 aa16.24■□□□□ 0.19
VPS26A-209ENST00000497564 NASPP49321 788 aaPredicted RBP16.24■□□□□ 0.19
VPS26A-209ENST00000497564 KIF22Q14807 665 aa16.24■□□□□ 0.19
VPS26A-209ENST00000497564 FBXO11Q86XK2 927 aa16.24■□□□□ 0.19
VPS26A-209ENST00000497564 LEO1Q8WVC0 666 aaPredicted RBP16.24■□□□□ 0.19
VPS26A-209ENST00000497564 COA7Q96BR5 231 aa16.24■□□□□ 0.19
VPS26A-209ENST00000497564 USP28Q96RU2 1077 aa16.24■□□□□ 0.19
VPS26A-209ENST00000497564 P2RX7Q99572 595 aaKnown RBP16.24■□□□□ 0.19
VPS26A-209ENST00000497564 RPAP3Q9H6T3 665 aaPredicted RBP16.24■□□□□ 0.19
VPS26A-209ENST00000497564 RIC8AQ9NPQ8 531 aa16.24■□□□□ 0.19
VPS26A-209ENST00000497564 FBXO28Q9NVF7 368 aa16.24■□□□□ 0.19
VPS26A-209ENST00000497564 TMOD4Q9NZQ9 345 aa16.24■□□□□ 0.19
VPS26A-209ENST00000497564 RCOR1Q9UKL0 485 aa16.24■□□□□ 0.19
VPS26A-209ENST00000497564 MYPNQ86TC9 1320 aa16.23■□□□□ 0.19
VPS26A-209ENST00000497564 DOCK3Q8IZD9 2030 aa16.23■□□□□ 0.19
VPS26A-209ENST00000497564 MGAMO43451 1857 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms