RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 FAAP100Q0VG06 881 aa20.21■□□□□ 0.83
SMC4-226ENST00000497311 MUM1L1Q5H9M0 696 aa20.21■□□□□ 0.83
SMC4-226ENST00000497311 GNASQ5JWF2 1037 aa20.21■□□□□ 0.83
SMC4-226ENST00000497311 TTBK2Q6IQ55 1244 aa20.21■□□□□ 0.83
SMC4-226ENST00000497311 BTNL9Q6UXG8 535 aa20.21■□□□□ 0.83
SMC4-226ENST00000497311 MFSD6Q6ZSS7 791 aa20.21■□□□□ 0.83
SMC4-226ENST00000497311 PLEKHM2Q8IWE5 1019 aa20.21■□□□□ 0.83
SMC4-226ENST00000497311 VTI1AQ96AJ9 217 aa20.21■□□□□ 0.83
SMC4-226ENST00000497311 RANBP17Q9H2T7 1088 aaKnown RBP20.21■□□□□ 0.83
SMC4-226ENST00000497311 OSBPL3Q9H4L5 887 aa20.21■□□□□ 0.83
SMC4-226ENST00000497311 CYP39A1Q9NYL5 469 aa20.21■□□□□ 0.83
SMC4-226ENST00000497311 LAMA2P24043 3122 aaKnown RBP20.2■□□□□ 0.82
SMC4-226ENST00000497311 IGHDP01880 384 aa20.2■□□□□ 0.82
SMC4-226ENST00000497311 SLC16A2P36021 539 aa20.2■□□□□ 0.82
SMC4-226ENST00000497311 TNFAIP2Q03169 654 aa20.2■□□□□ 0.82
SMC4-226ENST00000497311 AKNAD1Q5T1N1 836 aa20.2■□□□□ 0.82
SMC4-226ENST00000497311 SYDE2Q5VT97 1194 aa20.2■□□□□ 0.82
SMC4-226ENST00000497311 NSMFQ6X4W1 530 aa20.2■□□□□ 0.82
SMC4-226ENST00000497311 NOL8Q76FK4 1167 aaKnown RBP20.2■□□□□ 0.82
SMC4-226ENST00000497311 GPCPD1Q9NPB8 672 aa20.2■□□□□ 0.82
SMC4-226ENST00000497311 MROH7Q68CQ1 1323 aa20.2■□□□□ 0.82
SMC4-226ENST00000497311 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.19■□□□□ 0.82
SMC4-226ENST00000497311 NUCB1Q02818 461 aa20.19■□□□□ 0.82
SMC4-226ENST00000497311 TTC14Q96N46 770 aa20.19■□□□□ 0.82
SMC4-226ENST00000497311 RNF41Q9H4P4 317 aaPredicted RBP20.19■□□□□ 0.82
SMC4-226ENST00000497311 FRMPD2Q68DX3 1309 aaPredicted RBP20.19■□□□□ 0.82
SMC4-226ENST00000497311 A0A0U1RQG5 324 aaPredicted RBP20.18■□□□□ 0.82
SMC4-226ENST00000497311 CDK7P50613 346 aa20.18■□□□□ 0.82
SMC4-226ENST00000497311 NKX3-2P78367 333 aa20.18■□□□□ 0.82
SMC4-226ENST00000497311 FPGSQ05932 587 aa20.18■□□□□ 0.82
SMC4-226ENST00000497311 ZNF697Q5TEC3 545 aa20.18■□□□□ 0.82
SMC4-226ENST00000497311 EXOC6Q8TAG9 804 aa20.18■□□□□ 0.82
SMC4-226ENST00000497311 ZNF213O14771 459 aa20.17■□□□□ 0.82
SMC4-226ENST00000497311 CTAGE5O15320 804 aa20.17■□□□□ 0.82
SMC4-226ENST00000497311 PDHBP11177 359 aa20.17■□□□□ 0.82
SMC4-226ENST00000497311 TBC1D10CQ8IV04 446 aa20.17■□□□□ 0.82
SMC4-226ENST00000497311 ESR2Q92731 530 aa20.17■□□□□ 0.82
SMC4-226ENST00000497311 FAM161BQ96MY7 647 aa20.17■□□□□ 0.82
SMC4-226ENST00000497311 DIAPH3Q9NSV4 1193 aa20.17■□□□□ 0.82
SMC4-226ENST00000497311 GNEQ9Y223 722 aaKnown RBP20.17■□□□□ 0.82
SMC4-226ENST00000497311 ASTN1O14525 1302 aa20.17■□□□□ 0.82
SMC4-226ENST00000497311 ARVCFO00192 962 aa20.16■□□□□ 0.82
SMC4-226ENST00000497311 TIMP1P01033 207 aa20.16■□□□□ 0.82
SMC4-226ENST00000497311 SMAD3P84022 425 aaKnown RBP20.16■□□□□ 0.82
SMC4-226ENST00000497311 BEX3Q00994 111 aa20.16■□□□□ 0.82
SMC4-226ENST00000497311 IQSEC1Q6DN90 963 aa20.16■□□□□ 0.82
SMC4-226ENST00000497311 CWC27Q6UX04 472 aaKnown RBP20.16■□□□□ 0.82
SMC4-226ENST00000497311 EEPD1Q7L9B9 569 aa20.16■□□□□ 0.82
SMC4-226ENST00000497311 TLK2Q86UE8 772 aa20.16■□□□□ 0.82
SMC4-226ENST00000497311 FBXO16Q8IX29 292 aaPredicted RBP20.16■□□□□ 0.82
SMC4-226ENST00000497311 RNPC3Q96LT9 517 aaKnown RBP20.16■□□□□ 0.82
SMC4-226ENST00000497311 AP5M1Q9H0R1 490 aa20.16■□□□□ 0.82
SMC4-226ENST00000497311 ADD3Q9UEY8 706 aaKnown RBP20.16■□□□□ 0.82
SMC4-226ENST00000497311 TBX21Q9UL17 535 aa20.16■□□□□ 0.82
SMC4-226ENST00000497311 PNMA2Q9UL42 364 aa20.16■□□□□ 0.82
SMC4-226ENST00000497311 HIP1O00291 1037 aa20.15■□□□□ 0.82
SMC4-226ENST00000497311 SMPD1P17405 629 aa20.15■□□□□ 0.82
SMC4-226ENST00000497311 EPHB4P54760 987 aa20.15■□□□□ 0.82
SMC4-226ENST00000497311 ZNF543Q08ER8 600 aa20.15■□□□□ 0.82
SMC4-226ENST00000497311 BAATQ14032 418 aaPredicted RBP20.15■□□□□ 0.82
SMC4-226ENST00000497311 TAPT1Q6NXT6 567 aa20.15■□□□□ 0.82
SMC4-226ENST00000497311 POTEDQ86YR6 584 aa20.15■□□□□ 0.82
SMC4-226ENST00000497311 GUCD1Q96NT3 240 aa20.15■□□□□ 0.82
SMC4-226ENST00000497311 PURBQ96QR8 312 aaKnown RBP20.15■□□□□ 0.82
SMC4-226ENST00000497311 VTA1Q9NP79 307 aa20.15■□□□□ 0.82
SMC4-226ENST00000497311 PDGFCQ9NRA1 345 aa20.15■□□□□ 0.82
SMC4-226ENST00000497311 DDX49Q9Y6V7 483 aaKnown RBP20.15■□□□□ 0.82
SMC4-226ENST00000497311 NEDD4P46934 1319 aa20.14■□□□□ 0.81
SMC4-226ENST00000497311 PTPDC1A2A3K4 754 aa20.14■□□□□ 0.81
SMC4-226ENST00000497311 NFIBO00712 420 aa20.14■□□□□ 0.81
SMC4-226ENST00000497311 TLR3O15455 904 aaKnown RBP20.14■□□□□ 0.81
SMC4-226ENST00000497311 DYNC1LI2O43237 492 aaPredicted RBP20.14■□□□□ 0.81
SMC4-226ENST00000497311 ZEB2O60315 1214 aa20.14■□□□□ 0.81
SMC4-226ENST00000497311 SNHG28P0DPA3 235 aa20.14■□□□□ 0.81
SMC4-226ENST00000497311 NT5C2P49902 561 aa20.14■□□□□ 0.81
SMC4-226ENST00000497311 MORC4Q8TE76 937 aa20.14■□□□□ 0.81
SMC4-226ENST00000497311 ZKSCAN3Q9BRR0 538 aa20.14■□□□□ 0.81
SMC4-226ENST00000497311 Q9Y3F1 56 aa20.14■□□□□ 0.81
SMC4-226ENST00000497311 LOC102724159A0A0B4J2E5 919 aa20.13■□□□□ 0.81
SMC4-226ENST00000497311 CABYRO75952 493 aa20.13■□□□□ 0.81
SMC4-226ENST00000497311 PWP2Q15269 919 aaKnown RBP20.13■□□□□ 0.81
SMC4-226ENST00000497311 FSCN1Q16658 493 aaKnown RBP20.13■□□□□ 0.81
SMC4-226ENST00000497311 CCDC178Q5BJE1 867 aa20.13■□□□□ 0.81
SMC4-226ENST00000497311 GPATCH4Q5T3I0 446 aaKnown RBP20.13■□□□□ 0.81
SMC4-226ENST00000497311 MFSD5Q6N075 450 aa20.13■□□□□ 0.81
SMC4-226ENST00000497311 CXCL17Q6UXB2 119 aa20.13■□□□□ 0.81
SMC4-226ENST00000497311 KIAA1211Q6ZU35 1233 aa20.13■□□□□ 0.81
SMC4-226ENST00000497311 IQCA1Q86XH1 822 aa20.13■□□□□ 0.81
SMC4-226ENST00000497311 DGKHQ86XP1 1220 aa20.13■□□□□ 0.81
SMC4-226ENST00000497311 FAM126BQ8IXS8 530 aa20.13■□□□□ 0.81
SMC4-226ENST00000497311 LRRC37A2A6NM11 1700 aa20.13■□□□□ 0.81
SMC4-226ENST00000497311 LCTP09848 1927 aa20.12■□□□□ 0.81
SMC4-226ENST00000497311 ALDH5A1P51649 535 aaPredicted RBP20.12■□□□□ 0.81
SMC4-226ENST00000497311 SEMA6BQ9H3T3 888 aa20.12■□□□□ 0.81
SMC4-226ENST00000497311 WDR19Q8NEZ3 1342 aa20.11■□□□□ 0.81
SMC4-226ENST00000497311 KDM4AO75164 1064 aa20.11■□□□□ 0.81
SMC4-226ENST00000497311 PTGS1P23219 599 aa20.11■□□□□ 0.81
SMC4-226ENST00000497311 CALML3P27482 149 aa20.11■□□□□ 0.81
SMC4-226ENST00000497311 PPIGQ13427 754 aaKnown RBP eCLIP20.11■□□□□ 0.81
SMC4-226ENST00000497311 RNF207Q6ZRF8 634 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms