RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 AKR1B1P15121 316 aa11.78□□□□□ -0.52
SRSF4-205ENST00000497015 NHLH1Q02575 133 aa11.78□□□□□ -0.52
SRSF4-205ENST00000497015 TAP1Q03518 808 aa11.78□□□□□ -0.52
SRSF4-205ENST00000497015 PDE4DQ08499 809 aa11.78□□□□□ -0.52
SRSF4-205ENST00000497015 TMEM63BQ5T3F8 832 aa11.78□□□□□ -0.52
SRSF4-205ENST00000497015 PCSK9Q8NBP7 692 aaKnown RBP11.78□□□□□ -0.52
SRSF4-205ENST00000497015 ZHX1Q9UKY1 873 aaPredicted RBP11.78□□□□□ -0.52
SRSF4-205ENST00000497015 TRIM66O15016 1216 aa11.77□□□□□ -0.53
SRSF4-205ENST00000497015 B4GALT4O60513 344 aa11.77□□□□□ -0.53
SRSF4-205ENST00000497015 IDH1O75874 414 aaKnown RBP11.77□□□□□ -0.53
SRSF4-205ENST00000497015 POLR3DP05423 398 aaPredicted RBP11.77□□□□□ -0.53
SRSF4-205ENST00000497015 ATP2A2P16615 1042 aaKnown RBP11.77□□□□□ -0.53
SRSF4-205ENST00000497015 GRB10Q13322 594 aa11.77□□□□□ -0.53
SRSF4-205ENST00000497015 TTF1Q15361 905 aaPredicted RBP11.77□□□□□ -0.53
SRSF4-205ENST00000497015 CXCL17Q6UXB2 119 aa11.77□□□□□ -0.53
SRSF4-205ENST00000497015 MSL3Q8N5Y2 521 aaKnown RBP11.77□□□□□ -0.53
SRSF4-205ENST00000497015 FBXL18Q96ME1 805 aa11.77□□□□□ -0.53
SRSF4-205ENST00000497015 PHOX2BQ99453 314 aa11.77□□□□□ -0.53
SRSF4-205ENST00000497015 LARP6Q9BRS8 491 aaKnown RBP11.77□□□□□ -0.53
SRSF4-205ENST00000497015 CCDC8Q9H0W5 538 aaPredicted RBP11.77□□□□□ -0.53
SRSF4-205ENST00000497015 IL1RAPL2Q9NP60 686 aa11.77□□□□□ -0.53
SRSF4-205ENST00000497015 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.77□□□□□ -0.53
SRSF4-205ENST00000497015 COL11A1P12107 1806 aaPredicted RBP11.76□□□□□ -0.53
SRSF4-205ENST00000497015 PARP14Q460N5 1801 aa11.76□□□□□ -0.53
SRSF4-205ENST00000497015 WDR46O15213 610 aaKnown RBP11.76□□□□□ -0.53
SRSF4-205ENST00000497015 TLR3O15455 904 aaKnown RBP11.76□□□□□ -0.53
SRSF4-205ENST00000497015 ITGA7Q13683 1181 aa11.76□□□□□ -0.53
SRSF4-205ENST00000497015 TMEM67Q5HYA8 995 aa11.76□□□□□ -0.53
SRSF4-205ENST00000497015 TMEM179Q6ZVK1 233 aa11.76□□□□□ -0.53
SRSF4-205ENST00000497015 CERS3Q8IU89 383 aa11.76□□□□□ -0.53
SRSF4-205ENST00000497015 ARNTL2Q8WYA1 636 aa11.76□□□□□ -0.53
SRSF4-205ENST00000497015 RWDD1Q9H446 243 aaPredicted RBP11.76□□□□□ -0.53
SRSF4-205ENST00000497015 PPP1R9AQ9ULJ8 1098 aa11.76□□□□□ -0.53
SRSF4-205ENST00000497015 PCDHB8Q9UN66 801 aa11.76□□□□□ -0.53
SRSF4-205ENST00000497015 PCDHB13Q9Y5F0 798 aa11.76□□□□□ -0.53
SRSF4-205ENST00000497015 DDX49Q9Y6V7 483 aaKnown RBP11.76□□□□□ -0.53
SRSF4-205ENST00000497015 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
SRSF4-205ENST00000497015 EEF2P13639 858 aaKnown RBP11.75□□□□□ -0.53
SRSF4-205ENST00000497015 ATP5JP18859 108 aa11.75□□□□□ -0.53
SRSF4-205ENST00000497015 PSMC6P62333 389 aa11.75□□□□□ -0.53
SRSF4-205ENST00000497015 CAMK2BQ13554 666 aa11.75□□□□□ -0.53
SRSF4-205ENST00000497015 FAM178BQ8IXR5 827 aa11.75□□□□□ -0.53
SRSF4-205ENST00000497015 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.75□□□□□ -0.53
SRSF4-205ENST00000497015 SDR42E1Q8WUS8 393 aa11.75□□□□□ -0.53
SRSF4-205ENST00000497015 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
SRSF4-205ENST00000497015 GPATCH3Q96I76 525 aa11.75□□□□□ -0.53
SRSF4-205ENST00000497015 MTIF3Q9H2K0 278 aaKnown RBP11.75□□□□□ -0.53
SRSF4-205ENST00000497015 DCP1AQ9NPI6 582 aaPredicted RBP11.75□□□□□ -0.53
SRSF4-205ENST00000497015 MCM9Q9NXL9 1143 aa11.75□□□□□ -0.53
SRSF4-205ENST00000497015 GNEQ9Y223 722 aaKnown RBP11.75□□□□□ -0.53
SRSF4-205ENST00000497015 ZBBXA8MT70 800 aa11.74□□□□□ -0.53
SRSF4-205ENST00000497015 ICA1Q05084 483 aa11.74□□□□□ -0.53
SRSF4-205ENST00000497015 SLFNL1Q499Z3 407 aa11.74□□□□□ -0.53
SRSF4-205ENST00000497015 FAM83BQ5T0W9 1011 aa11.74□□□□□ -0.53
SRSF4-205ENST00000497015 RPUSD2Q8IZ73 545 aaKnown RBP11.74□□□□□ -0.53
SRSF4-205ENST00000497015 NUP88Q99567 741 aaPredicted RBP11.74□□□□□ -0.53
SRSF4-205ENST00000497015 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
SRSF4-205ENST00000497015 ABHD16BQ9H3Z7 469 aa11.74□□□□□ -0.53
SRSF4-205ENST00000497015 CYP2D7A0A087X1C5 515 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 POTEB3A0JP26 581 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 PRKAB2O43741 272 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 CYP2C9P11712 490 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 IL9P15248 144 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 TTC41PQ6P2S7 1318 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 POTEBQ6S5H4 581 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 ARMCX2Q7L311 632 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 DEFB128Q7Z7B8 93 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 CCDC144CPQ8IYA2 1237 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 GJD3Q8N144 294 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 EXOC6Q8TAG9 804 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 ECHDC1Q9NTX5 307 aa11.73□□□□□ -0.53
SRSF4-205ENST00000497015 MAGEB6P1A0A0J9YX57 407 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 TCRBV5S4A2TA0A5A2 114 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 LCHNA4D1U4 455 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 PDIA4P13667 645 aaKnown RBP11.72□□□□□ -0.53
SRSF4-205ENST00000497015 SMPD1P17405 629 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 CDK8P49336 464 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 CNTN2Q02246 1040 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 TNFAIP2Q03169 654 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 SNRNP48Q6IEG0 339 aaKnown RBP11.72□□□□□ -0.53
SRSF4-205ENST00000497015 TMCO2Q7Z6W1 182 aaPredicted RBP11.72□□□□□ -0.53
SRSF4-205ENST00000497015 SMC5Q8IY18 1101 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 LCORLQ8N3X6 602 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 UIMC1Q96RL1 719 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 HAUS7Q99871 368 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 ARHGEF10LQ9HCE6 1279 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 PDGFCQ9NRA1 345 aa11.72□□□□□ -0.53
SRSF4-205ENST00000497015 TRMT13Q9NUP7 481 aaKnown RBP11.72□□□□□ -0.53
SRSF4-205ENST00000497015 SOWAHBA6NEL2 793 aa11.71□□□□□ -0.53
SRSF4-205ENST00000497015 ATP2A1O14983 1001 aa11.71□□□□□ -0.53
SRSF4-205ENST00000497015 DYNC1LI2O43237 492 aaPredicted RBP11.71□□□□□ -0.53
SRSF4-205ENST00000497015 SLC4A3P48751 1232 aa11.71□□□□□ -0.53
SRSF4-205ENST00000497015 GPNMBQ14956 572 aa11.71□□□□□ -0.53
SRSF4-205ENST00000497015 TICAM2Q86XR7 235 aa11.71□□□□□ -0.53
SRSF4-205ENST00000497015 HERC6Q8IVU3 1022 aa11.71□□□□□ -0.53
SRSF4-205ENST00000497015 CPXCR1Q8N123 301 aa11.71□□□□□ -0.53
SRSF4-205ENST00000497015 PPP1R13LQ8WUF5 828 aa11.71□□□□□ -0.53
SRSF4-205ENST00000497015 DDRGK1Q96HY6 314 aa11.71□□□□□ -0.53
SRSF4-205ENST00000497015 TEX13BQ9BXU2 312 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms