RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 CFAP73A6NFT4 308 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 POTEMA6NI47 508 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.36□□□□□ -1.39
USF3-204ENST00000496826 POTEHQ6S545 545 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 POTEGQ6S5H5 508 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 ZNF444Q8N0Y2 327 aaPredicted RBP6.36□□□□□ -1.39
USF3-204ENST00000496826 NAPGQ99747 312 aaPredicted RBP6.36□□□□□ -1.39
USF3-204ENST00000496826 ZC3H7BQ9UGR2 993 aaKnown RBP6.36□□□□□ -1.39
USF3-204ENST00000496826 SLC12A6Q9UHW9 1150 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 DBR1Q9UK59 544 aaKnown RBP6.36□□□□□ -1.39
USF3-204ENST00000496826 ITGB1BP2Q9UKP3 347 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 ASAP2O43150 1006 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 IDH3BO43837 385 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 IFNA14P01570 189 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 TRADDQ15628 312 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 CARTPTQ16568 116 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 SV2CQ496J9 727 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 C19orf18Q8NEA5 215 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 FBXO41Q8TF61 875 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 GGA2Q9UJY4 613 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 STOML2Q9UJZ1 356 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 TMCC3Q9ULS5 477 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 NVLO15381 856 aaKnown RBP6.36□□□□□ -1.39
USF3-204ENST00000496826 KRT38O76015 456 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 SNUPNO95149 360 aaKnown RBP6.36□□□□□ -1.39
USF3-204ENST00000496826 HHATQ5VTY9 493 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 HAUS3Q68CZ6 603 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 PPP2R3CQ969Q6 453 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 HAVCR1Q96D42 359 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 FOPNLQ96NB1 174 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 VEZTQ9HBM0 779 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 IDEP14735 1019 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 POLGP54098 1239 aaPredicted RBP6.36□□□□□ -1.39
USF3-204ENST00000496826 CCDC15Q0P6D6 951 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 CCDC153Q494R4 210 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 TRIM72Q6ZMU5 477 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 CATIPQ7Z7H3 387 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 KCTD17Q8N5Z5 321 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 PTPRN2Q92932 1015 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 MIEF2Q96C03 454 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 CAPN1P07384 714 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 IFIT1P09914 478 aaKnown RBP6.36□□□□□ -1.39
USF3-204ENST00000496826 HSPA6P17066 643 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 AKAP5P24588 427 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 PDCD4Q53EL6 469 aaKnown RBP6.36□□□□□ -1.39
USF3-204ENST00000496826 RHPN2Q8IUC4 686 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 CCDC185Q8N715 623 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 DACH2Q96NX9 599 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 PPP2R3BQ9Y5P8 575 aa6.36□□□□□ -1.39
USF3-204ENST00000496826 TMEM110-MUSTN1A8MSY1 372 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 URI1O94763 535 aaPredicted RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 CA4P22748 312 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 STX12Q86Y82 276 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 TRIML2Q8N7C3 387 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 RNF31Q96EP0 1072 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 BRD8Q9H0E9 1235 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 TYW1Q9NV66 732 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 CIZ1Q9ULV3 898 aaPredicted RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 SPDYE16A6NNV3 312 aaPredicted RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 AKR1B10O60218 316 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 ZCCHC18P0CG32 403 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 GRK3P35626 688 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 NSFP46459 744 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 PUM3Q15397 648 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 SPDYE2Q495Y8 402 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 LRCH2Q5VUJ6 765 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 ISM2Q6H9L7 571 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 LDHAL6AQ6ZMR3 332 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 SYCE1Q8N0S2 351 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 MYRIPQ8NFW9 859 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 CCDC189A1A4V9 331 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 ARID3CA6NKF2 412 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 DAB1O75553 588 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 PTPN1P18031 435 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 SF3B3Q15393 1217 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 C6orf10Q5SRN2 563 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 ODR4Q5SWX8 454 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 RRM2BQ7LG56 351 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 ADCK1Q86TW2 530 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 IGSF22Q8N9C0 903 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 CABS1Q96KC9 395 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 SNX5Q9Y5X3 404 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 UBE4BO95155 1302 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 SYCE1LA8MT33 242 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 SCGB2A1O75556 95 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 YWHAQP27348 245 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 HSPA9P38646 679 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 PDE4BQ07343 736 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 CRNKL1Q9BZJ0 848 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 SYBUQ9NX95 663 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 DDX56Q9NY93 547 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 ADCY5O95622 1261 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 IMPDH2P12268 514 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 WDR93Q6P2C0 686 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 NBPF10Q6P3W6 841 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 DHX38Q92620 1227 aaKnown RBP6.35□□□□□ -1.39
USF3-204ENST00000496826 DEPDC7Q96QD5 511 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 THTPAQ9BU02 230 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 TRPV6Q9H1D0 765 aa6.35□□□□□ -1.39
USF3-204ENST00000496826 ADAM30Q9UKF2 790 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms