RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 USP17L20D6RJB6 530 aa13.86□□□□□ -0.19
PDE6B-212ENST00000496514 ARHGAP6O43182 974 aa13.86□□□□□ -0.19
PDE6B-212ENST00000496514 PPP1R11O60927 126 aaPredicted RBP13.86□□□□□ -0.19
PDE6B-212ENST00000496514 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
PDE6B-212ENST00000496514 IDEP14735 1019 aa13.86□□□□□ -0.19
PDE6B-212ENST00000496514 LONP1P36776 959 aaKnown RBP13.86□□□□□ -0.19
PDE6B-212ENST00000496514 USP17L24Q0WX57 530 aa13.86□□□□□ -0.19
PDE6B-212ENST00000496514 STK4Q13043 487 aa13.86□□□□□ -0.19
PDE6B-212ENST00000496514 USP17L6PQ6QN14 398 aa13.86□□□□□ -0.19
PDE6B-212ENST00000496514 ZNF287Q9HBT7 754 aa13.86□□□□□ -0.19
PDE6B-212ENST00000496514 SERPINB13Q9UIV8 391 aa13.86□□□□□ -0.19
PDE6B-212ENST00000496514 ATP6V0A2Q9Y487 856 aa13.86□□□□□ -0.19
PDE6B-212ENST00000496514 THSD7AQ9UPZ6 1657 aa13.86□□□□□ -0.19
PDE6B-212ENST00000496514 PDE4DQ08499 809 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 LRRC41Q15345 812 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 CDKAL1Q5VV42 579 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 NEK8Q86SG6 692 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 GLIS3Q8NEA6 775 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 ZMYND12Q9H0C1 365 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 TBC1D7Q9P0N9 293 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.85□□□□□ -0.19
PDE6B-212ENST00000496514 ROBO3Q96MS0 1386 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 DDTLA6NHG4 134 aaPredicted RBP13.85□□□□□ -0.19
PDE6B-212ENST00000496514 COPB1P53618 953 aaKnown RBP13.85□□□□□ -0.19
PDE6B-212ENST00000496514 MCM6Q14566 821 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
PDE6B-212ENST00000496514 ADGRF4Q8IZF3 695 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 ANKS1AQ92625 1134 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 TRIM10Q9UDY6 481 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 DDX60LQ5H9U9 1706 aaKnown RBP13.85□□□□□ -0.19
PDE6B-212ENST00000496514 NAV1Q8NEY1 1877 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 ADAMTSL1Q8N6G6 1762 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 FILIP1LQ4L180 1135 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 ZNF658Q5TYW1 1059 aaPredicted RBP13.85□□□□□ -0.19
PDE6B-212ENST00000496514 SP8Q8IXZ3 490 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 SPICE1Q8N0Z3 855 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 CHP1Q99653 195 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 PDGFDQ9GZP0 370 aaPredicted RBP13.85□□□□□ -0.19
PDE6B-212ENST00000496514 ST7Q9NRC1 585 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 TCP11L1Q9NUJ3 509 aa13.85□□□□□ -0.19
PDE6B-212ENST00000496514 MARCH6O60337 910 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 PLCG2P16885 1265 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 ZSCAN20P17040 1043 aaPredicted RBP13.84□□□□□ -0.19
PDE6B-212ENST00000496514 SHMT1P34896 483 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 IKQ13123 557 aaPredicted RBP13.84□□□□□ -0.19
PDE6B-212ENST00000496514 TBC1D22AQ8WUA7 517 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 CCDC12Q8WUD4 166 aaPredicted RBP13.84□□□□□ -0.19
PDE6B-212ENST00000496514 CRAMP1Q96RY5 1269 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 SLF1Q9BQI6 1058 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.84□□□□□ -0.19
PDE6B-212ENST00000496514 GAKO14976 1311 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 B4DLN1 442 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 HOXA10P31260 410 aaPredicted RBP13.84□□□□□ -0.19
PDE6B-212ENST00000496514 USH1GQ495M9 461 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 ARHGAP29Q52LW3 1261 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 APOBEC3HQ6NTF7 200 aaKnown RBP13.84□□□□□ -0.19
PDE6B-212ENST00000496514 KCNK18Q7Z418 384 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 IRF2BP1Q8IU81 584 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 PCMTD1Q96MG8 357 aaPredicted RBP13.84□□□□□ -0.19
PDE6B-212ENST00000496514 DNAJC18Q9H819 358 aa13.84□□□□□ -0.19
PDE6B-212ENST00000496514 KLRC4O43908 158 aa13.83□□□□□ -0.19
PDE6B-212ENST00000496514 ONECUT3O60422 494 aaPredicted RBP13.83□□□□□ -0.19
PDE6B-212ENST00000496514 AOC3Q16853 763 aa13.83□□□□□ -0.19
PDE6B-212ENST00000496514 TCP11X2Q5H9J9 407 aa13.83□□□□□ -0.19
PDE6B-212ENST00000496514 ARL6IP4Q66PJ3 421 aaKnown RBP13.83□□□□□ -0.19
PDE6B-212ENST00000496514 ELOA2Q8IYF1 753 aaPredicted RBP13.83□□□□□ -0.19
PDE6B-212ENST00000496514 MNS1Q8NEH6 495 aa13.83□□□□□ -0.19
PDE6B-212ENST00000496514 MMTAG2Q9BU76 263 aaKnown RBP13.83□□□□□ -0.19
PDE6B-212ENST00000496514 SPZ1Q9BXG8 430 aa13.83□□□□□ -0.19
PDE6B-212ENST00000496514 KANSL2Q9H9L4 492 aa13.83□□□□□ -0.19
PDE6B-212ENST00000496514 JMJD4Q9H9V9 463 aa13.83□□□□□ -0.19
PDE6B-212ENST00000496514 SH3GLB2Q9NR46 395 aa13.83□□□□□ -0.19
PDE6B-212ENST00000496514 DLEC1Q9Y238 1755 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 FAM170AA1A519 330 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 RGL2O15211 777 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 EDIL3O43854 480 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 CRKP46108 304 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 ERVK-24P63145 666 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 TEX35Q5T0J7 233 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 COA1Q9GZY4 146 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 PUF60Q9UHX1 559 aaKnown RBP13.83□□□□□ -0.2
PDE6B-212ENST00000496514 PARP3Q9Y6F1 533 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 MYH1P12882 1939 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 LY75O60449 1722 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 MFAP3LO75121 409 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 GNA11P29992 359 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 CASQ1P31415 396 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 KRT9P35527 623 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 SLF2Q8IX21 1173 aa13.83□□□□□ -0.2
PDE6B-212ENST00000496514 TDRD3Q9H7E2 651 aaKnown RBP13.83□□□□□ -0.2
PDE6B-212ENST00000496514 ADCY7P51828 1080 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 CALCRLQ16602 461 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 C15orf52Q6ZUT6 534 aaKnown RBP13.82□□□□□ -0.2
PDE6B-212ENST00000496514 KRT25Q7Z3Z0 450 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 C2CD5Q86YS7 1000 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 TEKT1Q969V4 418 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 LRWD1Q9UFC0 647 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 RWDD2AQ9UIY3 292 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 UBR3Q6ZT12 1888 aa13.82□□□□□ -0.2
PDE6B-212ENST00000496514 ZSCAN12O43309 604 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms