RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 MCM3APO60318 1980 aa14.13□□□□□ -0.15
ATG3-209ENST00000496423 EFCAB14O75071 495 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 GNAI3P08754 354 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 ZAP70P43403 619 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 BRDTQ58F21 947 aaPredicted RBP14.12□□□□□ -0.15
ATG3-209ENST00000496423 IER5LQ5T953 404 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 PRPF38AQ8NAV1 312 aaKnown RBP14.12□□□□□ -0.15
ATG3-209ENST00000496423 CHST13Q8NET6 341 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 FBXO22Q8NEZ5 403 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 REPS2Q8NFH8 660 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 MRPL38Q96DV4 380 aaKnown RBP14.12□□□□□ -0.15
ATG3-209ENST00000496423 SLF1Q9BQI6 1058 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 KANSL2Q9H9L4 492 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 GPR108Q9NPR9 543 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 TRMT13Q9NUP7 481 aaKnown RBP14.12□□□□□ -0.15
ATG3-209ENST00000496423 GNEQ9Y223 722 aaKnown RBP14.12□□□□□ -0.15
ATG3-209ENST00000496423 NOD1Q9Y239 953 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 ZDBF2Q9HCK1 2354 aa14.12□□□□□ -0.15
ATG3-209ENST00000496423 MYO5AQ9Y4I1 1855 aaKnown RBP14.12□□□□□ -0.15
ATG3-209ENST00000496423 TMEM221A6NGB7 291 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 M0R296 226 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 PARNO95453 639 aaKnown RBP14.11□□□□□ -0.15
ATG3-209ENST00000496423 ID4P47928 161 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 TCF15Q12870 199 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 FAM47CQ5HY64 1035 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 TRIM67Q6ZTA4 783 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.11□□□□□ -0.15
ATG3-209ENST00000496423 AMOTL1Q8IY63 956 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 CPXCR1Q8N123 301 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 SSH1Q8WYL5 1049 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 ANKS1AQ92625 1134 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 MUTYHQ9UIF7 546 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 SIP14410 1827 aa14.11□□□□□ -0.15
ATG3-209ENST00000496423 MAGEB6P1A0A0J9YX57 407 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.1□□□□□ -0.15
ATG3-209ENST00000496423 LCHNA4D1U4 455 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 USP17L12C9JPN9 530 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 USP17L21D6R901 530 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 ATP2A1O14983 1001 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 WDR5P61964 334 aaKnown RBP14.1□□□□□ -0.15
ATG3-209ENST00000496423 MTX1Q13505 466 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 ALDH1L2Q3SY69 923 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 FAM83BQ5T0W9 1011 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 RNF135Q8IUD6 432 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 SIAH1Q8IUQ4 282 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 FBXL6Q8N531 539 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 BANK1Q8NDB2 785 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 SAMD11Q96NU1 681 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 PIH1D3Q9NQM4 214 aaKnown RBP14.1□□□□□ -0.15
ATG3-209ENST00000496423 RIPK3Q9Y572 518 aa14.1□□□□□ -0.15
ATG3-209ENST00000496423 ABHD14A-ACY1A0A1B0GW23 586 aa14.09□□□□□ -0.15
ATG3-209ENST00000496423 LINC01553A4QN01 128 aa14.09□□□□□ -0.15
ATG3-209ENST00000496423 GJB5O95377 273 aa14.09□□□□□ -0.15
ATG3-209ENST00000496423 EEF2P13639 858 aaKnown RBP14.09□□□□□ -0.15
ATG3-209ENST00000496423 CPT1AP50416 773 aa14.09□□□□□ -0.15
ATG3-209ENST00000496423 NUBP1P53384 320 aa14.09□□□□□ -0.15
ATG3-209ENST00000496423 PTPN11Q06124 597 aaPredicted RBP14.09□□□□□ -0.15
ATG3-209ENST00000496423 SPRED2Q7Z698 418 aa14.09□□□□□ -0.15
ATG3-209ENST00000496423 IFNLR1Q8IU57 520 aaPredicted RBP14.09□□□□□ -0.15
ATG3-209ENST00000496423 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.09□□□□□ -0.15
ATG3-209ENST00000496423 KATNBL1Q9H079 304 aa14.09□□□□□ -0.15
ATG3-209ENST00000496423 FAM86C1Q9NVL1 165 aa14.09□□□□□ -0.15
ATG3-209ENST00000496423 INSL6Q9Y581 213 aa14.09□□□□□ -0.15
ATG3-209ENST00000496423 ASTN1O14525 1302 aa14.09□□□□□ -0.15
ATG3-209ENST00000496423 NAV1Q8NEY1 1877 aa14.08□□□□□ -0.16
ATG3-209ENST00000496423 AKR1B1P15121 316 aa14.08□□□□□ -0.16
ATG3-209ENST00000496423 SMPD1P17405 629 aa14.08□□□□□ -0.16
ATG3-209ENST00000496423 SMAD2Q15796 467 aaKnown RBP14.08□□□□□ -0.16
ATG3-209ENST00000496423 CNKSR3Q6P9H4 555 aa14.08□□□□□ -0.16
ATG3-209ENST00000496423 MTG1Q9BT17 334 aaPredicted RBP14.08□□□□□ -0.16
ATG3-209ENST00000496423 API5Q9BZZ5 524 aaKnown RBP14.08□□□□□ -0.16
ATG3-209ENST00000496423 CLDND1Q9NY35 253 aa14.08□□□□□ -0.16
ATG3-209ENST00000496423 COG6Q9Y2V7 657 aa14.08□□□□□ -0.16
ATG3-209ENST00000496423 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.08□□□□□ -0.16
ATG3-209ENST00000496423 PROB1E7EW31 1015 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 KPNA6O60684 536 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 MYL3P08590 195 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 FDX1P10109 184 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 OAZ1P54368 228 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 OS9Q13438 667 aaPredicted RBP14.07□□□□□ -0.16
ATG3-209ENST00000496423 IKBKEQ14164 716 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 TNNI3KQ59H18 835 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 NFRKBQ6P4R8 1299 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 KIAA1211Q6ZU35 1233 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 CAGE1Q8TC20 777 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 AFAP1L1Q8TED9 768 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 DBNDD2Q9BQY9 259 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 NSUN3Q9H649 340 aaKnown RBP14.07□□□□□ -0.16
ATG3-209ENST00000496423 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 FPGT-TNNI3KV9GXZ4 949 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 RAD50Q92878 1312 aa14.07□□□□□ -0.16
ATG3-209ENST00000496423 TANC1Q9C0D5 1861 aa14.06□□□□□ -0.16
ATG3-209ENST00000496423 CFAP54Q96N23 3096 aa14.06□□□□□ -0.16
ATG3-209ENST00000496423 STXBP3O00186 592 aa14.06□□□□□ -0.16
ATG3-209ENST00000496423 CLEC10AQ8IUN9 316 aa14.06□□□□□ -0.16
ATG3-209ENST00000496423 DDRGK1Q96HY6 314 aa14.06□□□□□ -0.16
ATG3-209ENST00000496423 MEIS3Q99687 375 aa14.06□□□□□ -0.16
ATG3-209ENST00000496423 RAVER2Q9HCJ3 691 aaKnown RBP14.06□□□□□ -0.16
ATG3-209ENST00000496423 TRPC6Q9Y210 931 aa14.06□□□□□ -0.16
ATG3-209ENST00000496423 USP34Q70CQ2 3546 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms