RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 CCDC96Q2M329 555 aa16.96■□□□□ 0.31
CXCL12-208ENST00000496375 RRP12Q5JTH9 1297 aaKnown RBP16.96■□□□□ 0.31
CXCL12-208ENST00000496375 PCSK9Q8NBP7 692 aaKnown RBP16.96■□□□□ 0.31
CXCL12-208ENST00000496375 DCAF4Q8WV16 495 aa16.96■□□□□ 0.31
CXCL12-208ENST00000496375 RILPL2Q969X0 211 aa16.96■□□□□ 0.31
CXCL12-208ENST00000496375 TOX2Q96NM4 488 aa16.96■□□□□ 0.31
CXCL12-208ENST00000496375 UPF3AQ9H1J1 476 aaKnown RBP16.96■□□□□ 0.31
CXCL12-208ENST00000496375 ASGR1P07306 291 aa16.95■□□□□ 0.3
CXCL12-208ENST00000496375 MUM1L1Q5H9M0 696 aa16.95■□□□□ 0.3
CXCL12-208ENST00000496375 GNASQ5JWF2 1037 aa16.95■□□□□ 0.3
CXCL12-208ENST00000496375 ZNF697Q5TEC3 545 aa16.95■□□□□ 0.3
CXCL12-208ENST00000496375 ZNF589Q86UQ0 364 aaPredicted RBP16.95■□□□□ 0.3
CXCL12-208ENST00000496375 GUCD1Q96NT3 240 aa16.95■□□□□ 0.3
CXCL12-208ENST00000496375 CCPG1Q9ULG6 757 aa16.95■□□□□ 0.3
CXCL12-208ENST00000496375 ELP1O95163 1332 aa16.95■□□□□ 0.3
CXCL12-208ENST00000496375 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.94■□□□□ 0.3
CXCL12-208ENST00000496375 ASB14A6NK59 587 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 EPHB4P54760 987 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 HAND2P61296 217 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 FPGSQ05932 587 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 TTBK2Q6IQ55 1244 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 VTI1AQ96AJ9 217 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 TMEM47Q9BQJ4 181 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 CYP39A1Q9NYL5 469 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 UNC80Q8N2C7 3258 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 ASTN1O14525 1302 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 ZMYM6O95789 1325 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
CXCL12-208ENST00000496375 LRRC37A2A6NM11 1700 aa16.93■□□□□ 0.3
CXCL12-208ENST00000496375 TOP1P11387 765 aaKnown RBP16.93■□□□□ 0.3
CXCL12-208ENST00000496375 SLC16A2P36021 539 aa16.93■□□□□ 0.3
CXCL12-208ENST00000496375 TNFAIP2Q03169 654 aa16.93■□□□□ 0.3
CXCL12-208ENST00000496375 BMP2KLQ5H9B9 411 aa16.93■□□□□ 0.3
CXCL12-208ENST00000496375 NSMFQ6X4W1 530 aa16.93■□□□□ 0.3
CXCL12-208ENST00000496375 NOL8Q76FK4 1167 aaKnown RBP16.93■□□□□ 0.3
CXCL12-208ENST00000496375 RNPC3Q96LT9 517 aaKnown RBP16.93■□□□□ 0.3
CXCL12-208ENST00000496375 RANBP17Q9H2T7 1088 aaKnown RBP16.93■□□□□ 0.3
CXCL12-208ENST00000496375 DDX49Q9Y6V7 483 aaKnown RBP16.93■□□□□ 0.3
CXCL12-208ENST00000496375 MROH7Q68CQ1 1323 aa16.93■□□□□ 0.3
CXCL12-208ENST00000496375 FRMPD2Q68DX3 1309 aaPredicted RBP16.93■□□□□ 0.3
CXCL12-208ENST00000496375 LCTP09848 1927 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 A0A0U1RQG5 324 aaPredicted RBP16.92■□□□□ 0.3
CXCL12-208ENST00000496375 DLL1O00548 723 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 CTAGE5O15320 804 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 ICAM1P05362 532 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 CDK7P50613 346 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 NKX3-2P78367 333 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 SMAD3P84022 425 aaKnown RBP16.92■□□□□ 0.3
CXCL12-208ENST00000496375 BEX3Q00994 111 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 SYDE2Q5VT97 1194 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 BTNL9Q6UXG8 535 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 GPCPD1Q9NPB8 672 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 TCP11L1Q9NUJ3 509 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 TBX21Q9UL17 535 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 RAD50Q92878 1312 aa16.92■□□□□ 0.3
CXCL12-208ENST00000496375 EYSQ5T1H1 3165 aa16.91■□□□□ 0.3
CXCL12-208ENST00000496375 CDH23Q9H251 3354 aa16.91■□□□□ 0.3
CXCL12-208ENST00000496375 ARVCFO00192 962 aa16.91■□□□□ 0.3
CXCL12-208ENST00000496375 TIMP1P01033 207 aa16.91■□□□□ 0.3
CXCL12-208ENST00000496375 AKNAD1Q5T1N1 836 aa16.91■□□□□ 0.3
CXCL12-208ENST00000496375 EEPD1Q7L9B9 569 aa16.91■□□□□ 0.3
CXCL12-208ENST00000496375 TLK2Q86UE8 772 aa16.91■□□□□ 0.3
CXCL12-208ENST00000496375 FBXO16Q8IX29 292 aaPredicted RBP16.91■□□□□ 0.3
CXCL12-208ENST00000496375 PURBQ96QR8 312 aaKnown RBP16.91■□□□□ 0.3
CXCL12-208ENST00000496375 DIAPH3Q9NSV4 1193 aa16.91■□□□□ 0.3
CXCL12-208ENST00000496375 GNEQ9Y223 722 aaKnown RBP16.91■□□□□ 0.3
CXCL12-208ENST00000496375 PDHBP11177 359 aa16.9■□□□□ 0.3
CXCL12-208ENST00000496375 SMPD1P17405 629 aa16.9■□□□□ 0.3
CXCL12-208ENST00000496375 PTGS1P23219 599 aa16.9■□□□□ 0.3
CXCL12-208ENST00000496375 MFAP1P55081 439 aaKnown RBP16.9■□□□□ 0.3
CXCL12-208ENST00000496375 BAATQ14032 418 aaPredicted RBP16.9■□□□□ 0.3
CXCL12-208ENST00000496375 MFSD6Q6ZSS7 791 aa16.9■□□□□ 0.3
CXCL12-208ENST00000496375 TBC1D10CQ8IV04 446 aa16.9■□□□□ 0.3
CXCL12-208ENST00000496375 AP5M1Q9H0R1 490 aa16.9■□□□□ 0.3
CXCL12-208ENST00000496375 SEMA6BQ9H3T3 888 aa16.9■□□□□ 0.3
CXCL12-208ENST00000496375 PDGFCQ9NRA1 345 aa16.9■□□□□ 0.3
CXCL12-208ENST00000496375 LAMA4Q16363 1823 aa16.89■□□□□ 0.29
CXCL12-208ENST00000496375 NFIBO00712 420 aa16.89■□□□□ 0.29
CXCL12-208ENST00000496375 TLR3O15455 904 aaKnown RBP16.89■□□□□ 0.29
CXCL12-208ENST00000496375 DYNC1LI2O43237 492 aaPredicted RBP16.89■□□□□ 0.29
CXCL12-208ENST00000496375 PCP11498 1178 aaKnown RBP16.89■□□□□ 0.29
CXCL12-208ENST00000496375 CHMLP26374 656 aa16.89■□□□□ 0.29
CXCL12-208ENST00000496375 IQSEC1Q6DN90 963 aa16.89■□□□□ 0.29
CXCL12-208ENST00000496375 MFSD5Q6N075 450 aa16.89■□□□□ 0.29
CXCL12-208ENST00000496375 TAPT1Q6NXT6 567 aa16.89■□□□□ 0.29
CXCL12-208ENST00000496375 CXCL17Q6UXB2 119 aa16.89■□□□□ 0.29
CXCL12-208ENST00000496375 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
CXCL12-208ENST00000496375 FAM126BQ8IXS8 530 aa16.89■□□□□ 0.29
CXCL12-208ENST00000496375 CDX2Q99626 313 aaPredicted RBP16.89■□□□□ 0.29
CXCL12-208ENST00000496375 TTYH1Q9H313 450 aaPredicted RBP16.89■□□□□ 0.29
CXCL12-208ENST00000496375 VTA1Q9NP79 307 aa16.89■□□□□ 0.29
CXCL12-208ENST00000496375 FSCN1Q16658 493 aaKnown RBP16.88■□□□□ 0.29
CXCL12-208ENST00000496375 TMEM63BQ5T3F8 832 aa16.88■□□□□ 0.29
CXCL12-208ENST00000496375 MORC4Q8TE76 937 aa16.88■□□□□ 0.29
CXCL12-208ENST00000496375 TTC14Q96N46 770 aa16.88■□□□□ 0.29
CXCL12-208ENST00000496375 RNF41Q9H4P4 317 aaPredicted RBP16.88■□□□□ 0.29
CXCL12-208ENST00000496375 NEDD4P46934 1319 aa16.88■□□□□ 0.29
CXCL12-208ENST00000496375 PTPDC1A2A3K4 754 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 ZNF213O14771 459 aa16.87■□□□□ 0.29
CXCL12-208ENST00000496375 ZEB2O60315 1214 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms