RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 SRBD1Q8N5C6 995 aaKnown RBP11.2□□□□□ -0.62
PRPF3-207ENST00000496202 IL27Q8NEV9 243 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 RAET1EQ8TD07 263 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 TRERF1Q96PN7 1200 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 PIGSQ96S52 555 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 MMP19Q99542 508 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 KIF2CQ99661 725 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 NUDT12Q9BQG2 462 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 AMNQ9BXJ7 453 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 RIOX1Q9H6W3 641 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 SRRDQ9UH36 339 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 HPS5Q9UPZ3 1129 aa11.2□□□□□ -0.62
PRPF3-207ENST00000496202 ZNF236Q9UL36 1845 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 RBBP6Q7Z6E9 1792 aaKnown RBP11.19□□□□□ -0.62
PRPF3-207ENST00000496202 ZNF536O15090 1300 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 ABCB11O95342 1321 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 CNTNAP5Q8WYK1 1306 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 PNMA6FA0A0J9YX94 578 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 STRNO43815 780 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 PTPREP23469 700 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 CTGFP29279 349 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 CDC27P30260 824 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 PRKCZQ05513 592 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 PKN2Q16513 984 aaKnown RBP11.19□□□□□ -0.62
PRPF3-207ENST00000496202 NBPF11Q86T75 865 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 CMTR1Q8N1G2 835 aaKnown RBP11.19□□□□□ -0.62
PRPF3-207ENST00000496202 DDX11Q96FC9 970 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 NCOA5Q9HCD5 579 aaKnown RBP11.19□□□□□ -0.62
PRPF3-207ENST00000496202 SLC5A4Q9NY91 659 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 RBM27Q9P2N5 1060 aaKnown RBP11.19□□□□□ -0.62
PRPF3-207ENST00000496202 LIMCH1Q9UPQ0 1083 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 RIPK3Q9Y572 518 aa11.19□□□□□ -0.62
PRPF3-207ENST00000496202 PFASO15067 1338 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 CYTH3O43739 400 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 CDKL5O76039 1030 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 TAL1P17542 331 aaPredicted RBP11.18□□□□□ -0.62
PRPF3-207ENST00000496202 ADORA2AP29274 412 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 ADD1P35611 737 aaKnown RBP11.18□□□□□ -0.62
PRPF3-207ENST00000496202 RGS2P41220 211 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 FLT3LGP49771 235 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 MAP2K5Q13163 448 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 GRB14Q14449 540 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 NSMFQ6X4W1 530 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 DPP9Q86TI2 863 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 TRIM22Q8IYM9 498 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 ABRAQ8N0Z2 381 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 ANKRD35Q8N283 1001 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 MTMR8Q96EF0 704 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 APBA2Q99767 749 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 TPCN1Q9ULQ1 816 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 MRPL11Q9Y3B7 192 aaKnown RBP11.18□□□□□ -0.62
PRPF3-207ENST00000496202 PCDHA1Q9Y5I3 950 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 PLXNA1Q9UIW2 1896 aa11.18□□□□□ -0.62
PRPF3-207ENST00000496202 hCG_1642624A0A1W2PR95 340 aa11.17□□□□□ -0.62
PRPF3-207ENST00000496202 PFKFB2O60825 505 aa11.17□□□□□ -0.62
PRPF3-207ENST00000496202 CYP2B6P20813 491 aa11.17□□□□□ -0.62
PRPF3-207ENST00000496202 CAP1Q01518 475 aa11.17□□□□□ -0.62
PRPF3-207ENST00000496202 SSRP1Q08945 709 aaKnown RBP11.17□□□□□ -0.62
PRPF3-207ENST00000496202 MUM1L1Q5H9M0 696 aa11.17□□□□□ -0.62
PRPF3-207ENST00000496202 MORN1Q5T089 497 aa11.17□□□□□ -0.62
PRPF3-207ENST00000496202 FBXO46Q6PJ61 603 aaPredicted RBP11.17□□□□□ -0.62
PRPF3-207ENST00000496202 HEATR3Q7Z4Q2 680 aa11.17□□□□□ -0.62
PRPF3-207ENST00000496202 MCF2L2Q86YR7 1114 aa11.17□□□□□ -0.62
PRPF3-207ENST00000496202 ZSCAN31Q96LW9 406 aaPredicted RBP11.17□□□□□ -0.62
PRPF3-207ENST00000496202 SH2B1Q9NRF2 756 aaPredicted RBP11.17□□□□□ -0.62
PRPF3-207ENST00000496202 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
PRPF3-207ENST00000496202 BIN2Q9UBW5 565 aaPredicted RBP11.17□□□□□ -0.62
PRPF3-207ENST00000496202 GABRQQ9UN88 632 aa11.17□□□□□ -0.62
PRPF3-207ENST00000496202 PTPN22Q9Y2R2 807 aa11.17□□□□□ -0.62
PRPF3-207ENST00000496202 PTCH2Q9Y6C5 1203 aa11.17□□□□□ -0.62
PRPF3-207ENST00000496202 V9GY48 417 aaPredicted RBP11.17□□□□□ -0.62
PRPF3-207ENST00000496202 PTPDC1A2A3K4 754 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 POTEB2H3BUK9 544 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 NFIBO00712 420 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 ADCY3O60266 1144 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 PGK2P07205 417 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 IFNAR1P17181 557 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 MCM2P49736 904 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 IRF5Q13568 498 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 ME3Q16798 604 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 SLC9C1Q4G0N8 1177 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
PRPF3-207ENST00000496202 TRMT44Q8IYL2 757 aaKnown RBP11.16□□□□□ -0.62
PRPF3-207ENST00000496202 SLAIN1Q8ND83 568 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 PHKBQ93100 1093 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 SLC26A6Q9BXS9 759 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 A1CFQ9NQ94 594 aaKnown RBP11.16□□□□□ -0.62
PRPF3-207ENST00000496202 GJD2Q9UKL4 321 aa11.16□□□□□ -0.62
PRPF3-207ENST00000496202 hCG_1984214I3L0E3 225 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 PPP1R11O60927 126 aaPredicted RBP11.15□□□□□ -0.62
PRPF3-207ENST00000496202 PPFIA3O75145 1194 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 LARGE1O95461 756 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 CFBP00751 764 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 XRCC5P13010 732 aaKnown RBP11.15□□□□□ -0.62
PRPF3-207ENST00000496202 GRK4P32298 578 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 NAPAP54920 295 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 FUT2Q10981 343 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 SCRN1Q12765 414 aa11.15□□□□□ -0.62
PRPF3-207ENST00000496202 RNF207Q6ZRF8 634 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms