RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 USP17L18D6R9N7 530 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 USP17L22D6RA61 530 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 USP17L17D6RBQ6 530 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 USP17L19D6RCP7 530 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 USP17L20D6RJB6 530 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 USP17L24Q0WX57 530 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 UVSSAQ2YD98 709 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 USH1GQ495M9 461 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 USP17L6PQ6QN14 398 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 FAM160B2Q86V87 743 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 ELOA2Q8IYF1 753 aaPredicted RBP18.61■□□□□ 0.57
HLA-A-208ENST00000496081 SCYL3Q8IZE3 742 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 PDILTQ8N807 584 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 FAM200AQ8TCP9 573 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 ZKSCAN4Q969J2 545 aaPredicted RBP18.61■□□□□ 0.57
HLA-A-208ENST00000496081 WRNIP1Q96S55 665 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 FEM1BQ9UK73 627 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 SSC5DA1L4H1 1573 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 A0A087X0B3 334 aa18.6■□□□□ 0.57
HLA-A-208ENST00000496081 LONP1P36776 959 aaKnown RBP18.6■□□□□ 0.57
HLA-A-208ENST00000496081 PRPHP41219 470 aa18.6■□□□□ 0.57
HLA-A-208ENST00000496081 ORC2Q13416 577 aaPredicted RBP18.6■□□□□ 0.57
HLA-A-208ENST00000496081 STX1AQ16623 288 aa18.6■□□□□ 0.57
HLA-A-208ENST00000496081 DTHD1Q6ZMT9 781 aa18.6■□□□□ 0.57
HLA-A-208ENST00000496081 ANP32BQ92688 251 aaKnown RBP18.6■□□□□ 0.57
HLA-A-208ENST00000496081 KIFC2Q96AC6 838 aa18.6■□□□□ 0.57
HLA-A-208ENST00000496081 DNAJC25Q9H1X3 360 aa18.6■□□□□ 0.57
HLA-A-208ENST00000496081 RANBP17Q9H2T7 1088 aaKnown RBP18.6■□□□□ 0.57
HLA-A-208ENST00000496081 SERTAD1Q9UHV2 236 aa18.6■□□□□ 0.57
HLA-A-208ENST00000496081 A0A087WWV3 80 aa18.6■□□□□ 0.57
HLA-A-208ENST00000496081 MEIS2O14770 477 aa18.6■□□□□ 0.57
HLA-A-208ENST00000496081 MDM2Q00987 491 aaPredicted RBP18.6■□□□□ 0.57
HLA-A-208ENST00000496081 LPAR1Q92633 364 aa18.6■□□□□ 0.57
HLA-A-208ENST00000496081 FBXO28Q9NVF7 368 aa18.6■□□□□ 0.57
HLA-A-208ENST00000496081 SMCHD1A6NHR9 2005 aa18.59■□□□□ 0.57
HLA-A-208ENST00000496081 ACTN4O43707 911 aaKnown RBP18.59■□□□□ 0.57
HLA-A-208ENST00000496081 NEMFO60524 1076 aa18.59■□□□□ 0.57
HLA-A-208ENST00000496081 TAL1P17542 331 aaPredicted RBP18.59■□□□□ 0.57
HLA-A-208ENST00000496081 PNOCQ13519 176 aa18.59■□□□□ 0.57
HLA-A-208ENST00000496081 SUPT20HL1Q3ZLR7 823 aa18.59■□□□□ 0.57
HLA-A-208ENST00000496081 DPY19L2Q6NUT2 758 aa18.59■□□□□ 0.57
HLA-A-208ENST00000496081 KLRG1Q96E93 195 aa18.59■□□□□ 0.57
HLA-A-208ENST00000496081 TUBE1Q9UJT0 475 aa18.59■□□□□ 0.57
HLA-A-208ENST00000496081 MYH7BA7E2Y1 1941 aa18.59■□□□□ 0.57
HLA-A-208ENST00000496081 OPLAHO14841 1288 aa18.58■□□□□ 0.57
HLA-A-208ENST00000496081 WDR46O15213 610 aaKnown RBP18.58■□□□□ 0.57
HLA-A-208ENST00000496081 FOXN1O15353 648 aa18.58■□□□□ 0.57
HLA-A-208ENST00000496081 CAVIN2O95810 425 aa18.58■□□□□ 0.57
HLA-A-208ENST00000496081 OR52Z1P0C646 297 aa18.58■□□□□ 0.57
HLA-A-208ENST00000496081 DGKZQ13574 1117 aa18.58■□□□□ 0.57
HLA-A-208ENST00000496081 C11orf57Q6ZUT1 292 aaPredicted RBP18.58■□□□□ 0.57
HLA-A-208ENST00000496081 WDR18Q9BV38 432 aa18.58■□□□□ 0.57
HLA-A-208ENST00000496081 CBX8Q9HC52 389 aa18.58■□□□□ 0.57
HLA-A-208ENST00000496081 ANO10Q9NW15 660 aa18.58■□□□□ 0.57
HLA-A-208ENST00000496081 TDP2O95551 362 aa18.58■□□□□ 0.56
HLA-A-208ENST00000496081 PTPRAP18433 802 aa18.58■□□□□ 0.56
HLA-A-208ENST00000496081 ZNF165P49910 485 aa18.58■□□□□ 0.56
HLA-A-208ENST00000496081 TRAF1Q13077 416 aa18.58■□□□□ 0.56
HLA-A-208ENST00000496081 MTMR2Q13614 643 aa18.58■□□□□ 0.56
HLA-A-208ENST00000496081 CCDC174Q6PII3 467 aa18.58■□□□□ 0.56
HLA-A-208ENST00000496081 DHX58Q96C10 678 aa18.58■□□□□ 0.56
HLA-A-208ENST00000496081 DCPSQ96C86 337 aaKnown RBP18.58■□□□□ 0.56
HLA-A-208ENST00000496081 PICK1Q9NRD5 415 aa18.58■□□□□ 0.56
HLA-A-208ENST00000496081 SPP2Q13103 211 aa18.57■□□□□ 0.56
HLA-A-208ENST00000496081 AP3B2Q13367 1082 aa18.57■□□□□ 0.56
HLA-A-208ENST00000496081 PPP4R3AQ6IN85 833 aa18.57■□□□□ 0.56
HLA-A-208ENST00000496081 KANK3Q6NY19 840 aa18.57■□□□□ 0.56
HLA-A-208ENST00000496081 DLK2Q6UY11 383 aa18.57■□□□□ 0.56
HLA-A-208ENST00000496081 LUZP1Q86V48 1076 aa18.57■□□□□ 0.56
HLA-A-208ENST00000496081 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
HLA-A-208ENST00000496081 L3MBTL3Q96JM7 780 aaPredicted RBP18.57■□□□□ 0.56
HLA-A-208ENST00000496081 PPP1R9BQ96SB3 815 aa18.57■□□□□ 0.56
HLA-A-208ENST00000496081 P2RX7Q99572 595 aaKnown RBP18.57■□□□□ 0.56
HLA-A-208ENST00000496081 ANO3Q9BYT9 981 aa18.57■□□□□ 0.56
HLA-A-208ENST00000496081 EMILIN3Q9NT22 766 aa18.57■□□□□ 0.56
HLA-A-208ENST00000496081 BIN1O00499 593 aa18.56■□□□□ 0.56
HLA-A-208ENST00000496081 SLC37A4O43826 429 aa18.56■□□□□ 0.56
HLA-A-208ENST00000496081 SLFN14P0C7P3 912 aa18.56■□□□□ 0.56
HLA-A-208ENST00000496081 CDC25AP30304 524 aa18.56■□□□□ 0.56
HLA-A-208ENST00000496081 CCDC173Q0VFZ6 552 aa18.56■□□□□ 0.56
HLA-A-208ENST00000496081 POSTNQ15063 836 aa18.56■□□□□ 0.56
HLA-A-208ENST00000496081 MCTP2Q6DN12 878 aa18.56■□□□□ 0.56
HLA-A-208ENST00000496081 SAMD1Q6SPF0 538 aaPredicted RBP18.56■□□□□ 0.56
HLA-A-208ENST00000496081 MTMR9Q96QG7 549 aa18.56■□□□□ 0.56
HLA-A-208ENST00000496081 AS3MTQ9HBK9 375 aa18.56■□□□□ 0.56
HLA-A-208ENST00000496081 HOOK1Q9UJC3 728 aaKnown RBP18.56■□□□□ 0.56
HLA-A-208ENST00000496081 USP2O75604 605 aaPredicted RBP18.55■□□□□ 0.56
HLA-A-208ENST00000496081 VCAM1P19320 739 aa18.55■□□□□ 0.56
HLA-A-208ENST00000496081 USP14P54578 494 aa18.55■□□□□ 0.56
HLA-A-208ENST00000496081 BACE1P56817 501 aa18.55■□□□□ 0.56
HLA-A-208ENST00000496081 ZRSR1Q15695 479 aaKnown RBP18.55■□□□□ 0.56
HLA-A-208ENST00000496081 E2F4Q16254 413 aa18.55■□□□□ 0.56
HLA-A-208ENST00000496081 SULF1Q8IWU6 871 aa18.55■□□□□ 0.56
HLA-A-208ENST00000496081 ZNF280CQ8ND82 737 aa18.55■□□□□ 0.56
HLA-A-208ENST00000496081 PCDHA5Q9Y5H7 936 aa18.55■□□□□ 0.56
HLA-A-208ENST00000496081 PHIPQ8WWQ0 1821 aa18.55■□□□□ 0.56
HLA-A-208ENST00000496081 PP2D1A8MPX8 630 aa18.55■□□□□ 0.56
HLA-A-208ENST00000496081 ADM5C9JUS6 153 aa18.55■□□□□ 0.56
HLA-A-208ENST00000496081 PRR29P0C7W0 189 aa18.55■□□□□ 0.56
HLA-A-208ENST00000496081 NLRP12P59046 1061 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 564 ms