RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 PSMG3-AS1Q96PY0 264 aa8.92□□□□□ -0.98
VIM-207ENST00000495528 ATG3Q9NT62 314 aa8.92□□□□□ -0.98
VIM-207ENST00000495528 ADAM30Q9UKF2 790 aa8.92□□□□□ -0.98
VIM-207ENST00000495528 PPT2Q9UMR5 302 aa8.92□□□□□ -0.98
VIM-207ENST00000495528 CD163L1Q9NR16 1453 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 CHURC1-FNTBB4DL54 471 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 DNAJA2O60884 412 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 SLC6A19Q695T7 634 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 CCDC81Q6ZN84 652 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 HDGFL2Q7Z4V5 671 aaPredicted RBP8.91□□□□□ -0.98
VIM-207ENST00000495528 MCATQ8IVS2 390 aaKnown RBP8.91□□□□□ -0.98
VIM-207ENST00000495528 GIMAP7Q8NHV1 300 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 IP6K1Q92551 441 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 LTV1Q96GA3 475 aaPredicted RBP8.91□□□□□ -0.98
VIM-207ENST00000495528 FERD3LQ96RJ6 166 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 MIPEPQ99797 713 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 DUSP23Q9BVJ7 150 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 OSBPL1AQ9BXW6 950 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 PRDM10Q9NQV6 1147 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 WNK3Q9BYP7 1800 aa8.91□□□□□ -0.98
VIM-207ENST00000495528 CST3P01034 146 aaPredicted RBP8.9□□□□□ -0.98
VIM-207ENST00000495528 GJA8P48165 433 aa8.9□□□□□ -0.98
VIM-207ENST00000495528 C1QTNF8P60827 252 aa8.9□□□□□ -0.98
VIM-207ENST00000495528 GPR162Q16538 588 aa8.9□□□□□ -0.98
VIM-207ENST00000495528 TMEM201Q5SNT2 666 aa8.9□□□□□ -0.98
VIM-207ENST00000495528 OGFOD3Q6PK18 319 aa8.9□□□□□ -0.98
VIM-207ENST00000495528 MRPL41Q8IXM3 137 aaKnown RBP8.9□□□□□ -0.98
VIM-207ENST00000495528 CARD11Q9BXL7 1154 aa8.9□□□□□ -0.98
VIM-207ENST00000495528 ANTXR1Q9H6X2 564 aa8.9□□□□□ -0.98
VIM-207ENST00000495528 AKAP12Q02952 1782 aa8.9□□□□□ -0.98
VIM-207ENST00000495528 UTRNP46939 3433 aa8.9□□□□□ -0.99
VIM-207ENST00000495528 MAP3K5Q99683 1374 aa8.89□□□□□ -0.99
VIM-207ENST00000495528 PNPLA7Q6ZV29 1317 aa8.89□□□□□ -0.99
VIM-207ENST00000495528 ADAM23O75077 832 aa8.89□□□□□ -0.99
VIM-207ENST00000495528 FBLN1P23142 703 aa8.89□□□□□ -0.99
VIM-207ENST00000495528 NASPP49321 788 aaPredicted RBP8.89□□□□□ -0.99
VIM-207ENST00000495528 DUSP27Q5VZP5 1158 aa8.89□□□□□ -0.99
VIM-207ENST00000495528 ZDHHC13Q8IUH4 622 aa8.89□□□□□ -0.99
VIM-207ENST00000495528 REXO1Q8N1G1 1221 aaKnown RBP8.89□□□□□ -0.99
VIM-207ENST00000495528 EHMT1Q9H9B1 1298 aa8.89□□□□□ -0.99
VIM-207ENST00000495528 LRRC4CQ9HCJ2 640 aa8.89□□□□□ -0.99
VIM-207ENST00000495528 ABCC6O95255 1503 aa8.89□□□□□ -0.99
VIM-207ENST00000495528 NHSQ6T4R5 1651 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 SLITRK5O94991 958 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 ATE1O95260 518 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 TGFB1P01137 390 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 POLD1P28340 1107 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 CAP2P40123 477 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 YARSP54577 528 aaKnown RBP8.88□□□□□ -0.99
VIM-207ENST00000495528 GNL2Q13823 731 aaKnown RBP8.88□□□□□ -0.99
VIM-207ENST00000495528 PHACTR4Q8IZ21 702 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 MFSD2AQ8NA29 543 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 RIN3Q8TB24 985 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 RASGRP4Q8TDF6 673 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 SYTL4Q96C24 671 aaPredicted RBP8.88□□□□□ -0.99
VIM-207ENST00000495528 TINF2Q9BSI4 451 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 TERF2IPQ9NYB0 399 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 TFCP2L1Q9NZI6 479 aa8.88□□□□□ -0.99
VIM-207ENST00000495528 EDC4Q6P2E9 1401 aaKnown RBP8.88□□□□□ -0.99
VIM-207ENST00000495528 A0A1W2PP64 1363 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 PAPPAQ13219 1627 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 SLC22A31A6NKX4 558 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 RBAK-RBAKDNI3L0D1 243 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 HOXC9P31274 260 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 CYP27C1Q4G0S4 372 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 ARSHQ5FYA8 562 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 OVOS1Q6IE37 1185 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 LETMD1Q6P1Q0 360 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 CDH24Q86UP0 819 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 NLGN2Q8NFZ4 835 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 SPATA32Q96LK8 384 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 PUS7Q96PZ0 661 aaKnown RBP8.87□□□□□ -0.99
VIM-207ENST00000495528 LEMD3Q9Y2U8 911 aa8.87□□□□□ -0.99
VIM-207ENST00000495528 MAP3K19Q56UN5 1328 aa8.86□□□□□ -0.99
VIM-207ENST00000495528 MON2Q7Z3U7 1717 aa8.86□□□□□ -0.99
VIM-207ENST00000495528 PRR19A6NJB7 356 aa8.86□□□□□ -0.99
VIM-207ENST00000495528 CYP27A1Q02318 531 aa8.86□□□□□ -0.99
VIM-207ENST00000495528 VPS37DQ86XT2 251 aa8.86□□□□□ -0.99
VIM-207ENST00000495528 ZCRB1Q8TBF4 217 aaKnown RBP8.86□□□□□ -0.99
VIM-207ENST00000495528 CPLX3Q8WVH0 158 aa8.86□□□□□ -0.99
VIM-207ENST00000495528 METTL22Q9BUU2 404 aaPredicted RBP8.86□□□□□ -0.99
VIM-207ENST00000495528 GMIPQ9P107 970 aa8.86□□□□□ -0.99
VIM-207ENST00000495528 ZNRF3Q9ULT6 936 aa8.86□□□□□ -0.99
VIM-207ENST00000495528 TPX2Q9ULW0 747 aaKnown RBP8.86□□□□□ -0.99
VIM-207ENST00000495528 ANKRD36BQ8N2N9 1353 aa8.86□□□□□ -0.99
VIM-207ENST00000495528 BTAF1O14981 1849 aa8.85□□□□□ -0.99
VIM-207ENST00000495528 EOMESO95936 686 aa8.85□□□□□ -0.99
VIM-207ENST00000495528 DNAJA1P31689 397 aaKnown RBP8.85□□□□□ -0.99
VIM-207ENST00000495528 SOX9P48436 509 aa8.85□□□□□ -0.99
VIM-207ENST00000495528 AMPHP49418 695 aa8.85□□□□□ -0.99
VIM-207ENST00000495528 NAALADL2Q58DX5 795 aa8.85□□□□□ -0.99
VIM-207ENST00000495528 SLC51AQ86UW1 340 aa8.85□□□□□ -0.99
VIM-207ENST00000495528 COL23A1Q86Y22 540 aaPredicted RBP8.85□□□□□ -0.99
VIM-207ENST00000495528 BAHD1Q8TBE0 780 aaPredicted RBP8.85□□□□□ -0.99
VIM-207ENST00000495528 COG3Q96JB2 828 aa8.85□□□□□ -0.99
VIM-207ENST00000495528 KIF2CQ99661 725 aa8.85□□□□□ -0.99
VIM-207ENST00000495528 CCNL1Q9UK58 526 aaPredicted RBP8.85□□□□□ -0.99
VIM-207ENST00000495528 KAT6BQ8WYB5 2073 aa8.85□□□□□ -0.99
VIM-207ENST00000495528 NSD2O96028 1365 aa8.85□□□□□ -0.99
VIM-207ENST00000495528 FAM86C2PA6NEL3 165 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms