RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 RIOK3O14730 519 aaKnown RBP11.76□□□□□ -0.53
SAMM50-206ENST00000494795 PLCG1P19174 1290 aa11.76□□□□□ -0.53
SAMM50-206ENST00000494795 CDK11BP21127 795 aaKnown RBP11.76□□□□□ -0.53
SAMM50-206ENST00000494795 STAT6P42226 847 aa11.76□□□□□ -0.53
SAMM50-206ENST00000494795 NONOQ15233 471 aaKnown RBP eCLIP11.76□□□□□ -0.53
SAMM50-206ENST00000494795 TPD52L1Q16890 204 aaPredicted RBP11.76□□□□□ -0.53
SAMM50-206ENST00000494795 REXO1Q8N1G1 1221 aaKnown RBP11.76□□□□□ -0.53
SAMM50-206ENST00000494795 IQUBQ8NA54 791 aa11.76□□□□□ -0.53
SAMM50-206ENST00000494795 CCDC148Q8NFR7 591 aa11.76□□□□□ -0.53
SAMM50-206ENST00000494795 HLA-DOAP06340 250 aa11.76□□□□□ -0.53
SAMM50-206ENST00000494795 CCT6AP40227 531 aaKnown RBP11.76□□□□□ -0.53
SAMM50-206ENST00000494795 PRCPP42785 496 aa11.76□□□□□ -0.53
SAMM50-206ENST00000494795 DGKZQ13574 1117 aa11.76□□□□□ -0.53
SAMM50-206ENST00000494795 CCDC178Q5BJE1 867 aa11.76□□□□□ -0.53
SAMM50-206ENST00000494795 RRAGBQ5VZM2 374 aa11.76□□□□□ -0.53
SAMM50-206ENST00000494795 PPP1R1BQ9UD71 204 aaPredicted RBP11.76□□□□□ -0.53
SAMM50-206ENST00000494795 RNF225M0QZC1 329 aaPredicted RBP11.75□□□□□ -0.53
SAMM50-206ENST00000494795 FANCGO15287 622 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 ERCC3P19447 782 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 ZYXQ15942 572 aaKnown RBP11.75□□□□□ -0.53
SAMM50-206ENST00000494795 USH1GQ495M9 461 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 SOGA3Q5TF21 947 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 KCNK18Q7Z418 384 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 NEK8Q86SG6 692 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 CERS3Q8IU89 383 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 VSTM4Q8IW00 320 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 MLKLQ8NB16 471 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 ENOX1Q8TC92 643 aaKnown RBP11.75□□□□□ -0.53
SAMM50-206ENST00000494795 ACER1Q8TDN7 264 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 CPLX3Q8WVH0 158 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 CNKSR1Q969H4 720 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 GLIS2Q9BZE0 524 aaPredicted RBP11.75□□□□□ -0.53
SAMM50-206ENST00000494795 TMX1Q9H3N1 280 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 C6orf50Q9HD87 102 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 NEMFO60524 1076 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 FCER1AP12319 257 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 TNNT1P13805 278 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 QRICH1Q2TAL8 776 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 CSRNP1Q96S65 589 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 TMEM39BQ9GZU3 492 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 KLRC4O43908 158 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 RPN1P04843 607 aaKnown RBP11.75□□□□□ -0.53
SAMM50-206ENST00000494795 MTF1Q14872 753 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 ELOA2Q8IYF1 753 aaPredicted RBP11.75□□□□□ -0.53
SAMM50-206ENST00000494795 GLIS3Q8NEA6 775 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 IDI2Q9BXS1 227 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 PI4KBQ9UBF8 816 aa11.75□□□□□ -0.53
SAMM50-206ENST00000494795 SYNRGQ9UMZ2 1314 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 OR52Z1P0C646 297 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 LONP1P36776 959 aaKnown RBP11.74□□□□□ -0.53
SAMM50-206ENST00000494795 UBA7P41226 1012 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 SLC1A4P43007 532 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 KMT5BQ4FZB7 885 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 ARL6IP4Q66PJ3 421 aaKnown RBP11.74□□□□□ -0.53
SAMM50-206ENST00000494795 LZTS2Q9BRK4 669 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 F5H6K3 240 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 BMP15O95972 392 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 TPM3P06753 285 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 ADCY7P51828 1080 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 ICA1Q05084 483 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 KLRC3Q07444 240 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 ASPRV1Q53RT3 343 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 SLFN13Q68D06 897 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 TMEM139Q8IV31 216 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 CCAR2Q8N163 923 aaKnown RBP11.74□□□□□ -0.53
SAMM50-206ENST00000494795 SWAP70Q9UH65 585 aa11.74□□□□□ -0.53
SAMM50-206ENST00000494795 HOOK1Q9UJC3 728 aaKnown RBP11.74□□□□□ -0.53
SAMM50-206ENST00000494795 SFPQP23246 707 aaKnown RBP eCLIP11.73□□□□□ -0.53
SAMM50-206ENST00000494795 NBPF9Q3BBW0 867 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 TATDN1Q6P1N9 297 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 CABP7Q86V35 215 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 LARGE2Q8N3Y3 721 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 TBC1D5Q92609 795 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 GSDMAQ96QA5 445 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 VEZTQ9HBM0 779 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 POLD4Q9HCU8 107 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 FZD1Q9UP38 647 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 ASTN2O75129 1339 aaPredicted RBP11.73□□□□□ -0.53
SAMM50-206ENST00000494795 PNMA6FA0A0J9YX94 578 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 NDUFB10O96000 172 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 GNA11P29992 359 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 HOXA13P31271 388 aaPredicted RBP11.73□□□□□ -0.53
SAMM50-206ENST00000494795 KANK3Q6NY19 840 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 TTLL6Q8N841 843 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 HAS1Q92839 578 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 MTMR9Q96QG7 549 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 VPS16Q9H269 839 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 SERPINA10Q9UK55 444 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 MORC2Q9Y6X9 1032 aaPredicted RBP11.73□□□□□ -0.53
SAMM50-206ENST00000494795 GREB1LQ9C091 1923 aaPredicted RBP11.73□□□□□ -0.53
SAMM50-206ENST00000494795 ZBTB5O15062 677 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 GTPBP6O43824 516 aaPredicted RBP11.73□□□□□ -0.53
SAMM50-206ENST00000494795 TPM4P67936 248 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 STK4Q13043 487 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 NR1I3Q14994 352 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 ABCB5Q2M3G0 1257 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 DYMQ7RTS9 669 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 KRT25Q7Z3Z0 450 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 IRF2BP1Q8IU81 584 aa11.73□□□□□ -0.53
SAMM50-206ENST00000494795 ZNF710Q8N1W2 664 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms