RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 CYBAP13498 195 aa18.53■□□□□ 0.56
LIME1-209ENST00000494776 PSMA5P28066 241 aa18.53■□□□□ 0.56
LIME1-209ENST00000494776 CNTN2Q02246 1040 aa18.53■□□□□ 0.56
LIME1-209ENST00000494776 QRICH1Q2TAL8 776 aa18.53■□□□□ 0.56
LIME1-209ENST00000494776 PRPF38BQ5VTL8 546 aaKnown RBP18.53■□□□□ 0.56
LIME1-209ENST00000494776 FBXO11Q86XK2 927 aa18.53■□□□□ 0.56
LIME1-209ENST00000494776 MSL3Q8N5Y2 521 aaKnown RBP18.53■□□□□ 0.56
LIME1-209ENST00000494776 KCNB2Q92953 911 aa18.53■□□□□ 0.56
LIME1-209ENST00000494776 TCEANC2Q96MN5 208 aa18.53■□□□□ 0.56
LIME1-209ENST00000494776 CRISPLD2Q9H0B8 497 aa18.53■□□□□ 0.56
LIME1-209ENST00000494776 CYP39A1Q9NYL5 469 aa18.53■□□□□ 0.56
LIME1-209ENST00000494776 NFIBO00712 420 aa18.52■□□□□ 0.56
LIME1-209ENST00000494776 MSCO60682 206 aa18.52■□□□□ 0.56
LIME1-209ENST00000494776 FARP2O94887 1054 aaPredicted RBP18.52■□□□□ 0.56
LIME1-209ENST00000494776 IGHA2P01877 340 aa18.52■□□□□ 0.56
LIME1-209ENST00000494776 EXOSC10Q01780 885 aaKnown RBP18.52■□□□□ 0.56
LIME1-209ENST00000494776 BAATQ14032 418 aaPredicted RBP18.52■□□□□ 0.56
LIME1-209ENST00000494776 BLOC1S2Q6QNY1 142 aa18.52■□□□□ 0.56
LIME1-209ENST00000494776 ZNF467Q7Z7K2 595 aaPredicted RBP18.52■□□□□ 0.56
LIME1-209ENST00000494776 HOMER1Q86YM7 354 aa18.52■□□□□ 0.56
LIME1-209ENST00000494776 TRPV1Q8NER1 839 aa18.52■□□□□ 0.56
LIME1-209ENST00000494776 MAP3K14Q99558 947 aa18.52■□□□□ 0.56
LIME1-209ENST00000494776 USP26Q9BXU7 913 aa18.52■□□□□ 0.56
LIME1-209ENST00000494776 DDX20Q9UHI6 824 aaKnown RBP18.52■□□□□ 0.56
LIME1-209ENST00000494776 NRBP1Q9UHY1 535 aa18.52■□□□□ 0.56
LIME1-209ENST00000494776 ABCB11O95342 1321 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 SYNGAP1Q96PV0 1343 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 ZBTB5O15062 677 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 EIF5BO60841 1220 aaKnown RBP18.51■□□□□ 0.55
LIME1-209ENST00000494776 RXRAP19793 462 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 CALML3P27482 149 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 GNAQP50148 359 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 MAMDC4Q6UXC1 1216 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 RNF207Q6ZRF8 634 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 CCDC144CPQ8IYA2 1237 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 FAM133AQ8N9E0 248 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 CLEC4DQ8WXI8 215 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 AMNQ9BXJ7 453 aa18.51■□□□□ 0.55
LIME1-209ENST00000494776 NAP1L2Q9ULW6 460 aaPredicted RBP18.51■□□□□ 0.55
LIME1-209ENST00000494776 MRPL11Q9Y3B7 192 aaKnown RBP18.51■□□□□ 0.55
LIME1-209ENST00000494776 ASB14A6NK59 587 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 SEPT4O43236 478 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 ARMCX2Q7L311 632 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 SGMS1Q86VZ5 419 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 MICU3Q86XE3 530 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 MCF2L2Q86YR7 1114 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 RAB11FIP4Q86YS3 637 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 ANKLE1Q8NAG6 615 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 PIBF1Q8WXW3 757 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 PIGSQ96S52 555 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 LZTS2Q9BRK4 669 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 RIOX1Q9H6W3 641 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 ADD3Q9UEY8 706 aaKnown RBP18.5■□□□□ 0.55
LIME1-209ENST00000494776 ZHX1Q9UKY1 873 aaPredicted RBP18.5■□□□□ 0.55
LIME1-209ENST00000494776 OGDHLQ9ULD0 1010 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 PLXNA1Q9UIW2 1896 aa18.5■□□□□ 0.55
LIME1-209ENST00000494776 SOWAHBA6NEL2 793 aa18.49■□□□□ 0.55
LIME1-209ENST00000494776 CPA1P15085 419 aa18.49■□□□□ 0.55
LIME1-209ENST00000494776 CASTP20810 708 aaKnown RBP18.49■□□□□ 0.55
LIME1-209ENST00000494776 TRAF1Q13077 416 aa18.49■□□□□ 0.55
LIME1-209ENST00000494776 ANO1Q5XXA6 986 aa18.49■□□□□ 0.55
LIME1-209ENST00000494776 LHX8Q68G74 356 aa18.49■□□□□ 0.55
LIME1-209ENST00000494776 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.49■□□□□ 0.55
LIME1-209ENST00000494776 SNAI1O95863 264 aaPredicted RBP18.48■□□□□ 0.55
LIME1-209ENST00000494776 RPS6P62753 249 aaKnown RBP18.48■□□□□ 0.55
LIME1-209ENST00000494776 SLC30A10Q6XR72 485 aa18.48■□□□□ 0.55
LIME1-209ENST00000494776 Q6ZUG5 572 aa18.48■□□□□ 0.55
LIME1-209ENST00000494776 FANCBQ8NB91 859 aa18.48■□□□□ 0.55
LIME1-209ENST00000494776 MTMR8Q96EF0 704 aa18.48■□□□□ 0.55
LIME1-209ENST00000494776 RRP36Q96EU6 259 aaKnown RBP18.48■□□□□ 0.55
LIME1-209ENST00000494776 FGD4Q96M96 766 aa18.48■□□□□ 0.55
LIME1-209ENST00000494776 PURBQ96QR8 312 aaKnown RBP18.48■□□□□ 0.55
LIME1-209ENST00000494776 ABHD16BQ9H3Z7 469 aa18.48■□□□□ 0.55
LIME1-209ENST00000494776 SEC63Q9UGP8 760 aaKnown RBP18.48■□□□□ 0.55
LIME1-209ENST00000494776 PCDHA1Q9Y5I3 950 aa18.48■□□□□ 0.55
LIME1-209ENST00000494776 BRCA2P51587 3418 aa18.48■□□□□ 0.55
LIME1-209ENST00000494776 TNRC18O15417 2968 aaPredicted RBP18.47■□□□□ 0.55
LIME1-209ENST00000494776 PNMA6FA0A0J9YX94 578 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 KLF18A0A0U1RQI7 1052 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 ZBTB43O43298 467 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 CYTH3O43739 400 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 MYCNP04198 464 aaPredicted RBP18.47■□□□□ 0.55
LIME1-209ENST00000494776 ZNF865P0CJ78 1059 aaPredicted RBP18.47■□□□□ 0.55
LIME1-209ENST00000494776 RARBP10826 455 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 AKR1A1P14550 325 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 RPS6KB1P23443 525 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 ACVR2BQ13705 512 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 APOA5Q6Q788 366 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 NECAB2Q7Z6G3 386 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 RGS22Q8NE09 1264 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 PAWRQ96IZ0 340 aaKnown RBP18.47■□□□□ 0.55
LIME1-209ENST00000494776 MPHOSPH6Q99547 160 aaKnown RBP18.47■□□□□ 0.55
LIME1-209ENST00000494776 SPZ1Q9BXG8 430 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 FAM184BQ9ULE4 1060 aa18.47■□□□□ 0.55
LIME1-209ENST00000494776 PLEKHA8P1O95397 391 aa18.46■□□□□ 0.55
LIME1-209ENST00000494776 SMARCA1P28370 1054 aa18.46■□□□□ 0.55
LIME1-209ENST00000494776 SLC35G1Q2M3R5 365 aa18.46■□□□□ 0.55
LIME1-209ENST00000494776 CMTR1Q8N1G2 835 aaKnown RBP18.46■□□□□ 0.55
LIME1-209ENST00000494776 CCDC82Q8N4S0 544 aa18.46■□□□□ 0.55
LIME1-209ENST00000494776 ARRDC4Q8NCT1 418 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms