RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 GPATCH4Q5T3I0 446 aaKnown RBP12.5□□□□□ -0.41
ZIC4-216ENST00000494569 KRT25Q7Z3Z0 450 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 ADGRF4Q8IZF3 695 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 CCDC12Q8WUD4 166 aaPredicted RBP12.5□□□□□ -0.41
ZIC4-216ENST00000494569 DCAF4Q8WV16 495 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 TMEM60Q9H2L4 133 aa12.5□□□□□ -0.41
ZIC4-216ENST00000494569 TDRD3Q9H7E2 651 aaKnown RBP12.5□□□□□ -0.41
ZIC4-216ENST00000494569 FRMPD2Q68DX3 1309 aaPredicted RBP12.49□□□□□ -0.41
ZIC4-216ENST00000494569 RLFQ13129 1914 aa12.49□□□□□ -0.41
ZIC4-216ENST00000494569 MYO1BO43795 1136 aa12.49□□□□□ -0.41
ZIC4-216ENST00000494569 FKBP1CQ5VVH2 108 aa12.49□□□□□ -0.41
ZIC4-216ENST00000494569 UBA5Q9GZZ9 404 aa12.49□□□□□ -0.41
ZIC4-216ENST00000494569 PNMA6FA0A0J9YX94 578 aa12.49□□□□□ -0.41
ZIC4-216ENST00000494569 SMCO2A6NFE2 343 aa12.49□□□□□ -0.41
ZIC4-216ENST00000494569 DYNC1I1O14576 645 aa12.49□□□□□ -0.41
ZIC4-216ENST00000494569 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
ZIC4-216ENST00000494569 TBX2Q13207 712 aaPredicted RBP12.49□□□□□ -0.41
ZIC4-216ENST00000494569 GMCL1Q96IK5 515 aa12.49□□□□□ -0.41
ZIC4-216ENST00000494569 TAOK3Q9H2K8 898 aa12.49□□□□□ -0.41
ZIC4-216ENST00000494569 RIC8AQ9NPQ8 531 aa12.49□□□□□ -0.41
ZIC4-216ENST00000494569 EEF2P13639 858 aaKnown RBP12.48□□□□□ -0.41
ZIC4-216ENST00000494569 NAALADL2Q58DX5 795 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 TMEM179Q6ZVK1 233 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 TMEM139Q8IV31 216 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 GRAMD1CQ8IYS0 662 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 AGBL3Q8NEM8 1001 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 MYRIPQ8NFW9 859 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 KANSL2Q9H9L4 492 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 C6orf50Q9HD87 102 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 BIN1O00499 593 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 GNA11P29992 359 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 MCM7P33993 719 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 NAPAP54920 295 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 CUL4BQ13620 913 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 CERKLQ49MI3 558 aaPredicted RBP12.48□□□□□ -0.41
ZIC4-216ENST00000494569 TTBK2Q6IQ55 1244 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 ZNF710Q8N1W2 664 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 CACTINQ8WUQ7 758 aaKnown RBP12.48□□□□□ -0.41
ZIC4-216ENST00000494569 MTMR9Q96QG7 549 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 CCSER1Q9C0I3 900 aa12.48□□□□□ -0.41
ZIC4-216ENST00000494569 VWA3AA6NCI4 1184 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 TBC1D12O60347 775 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 ATP2B1P20020 1258 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 KCNJ6P48051 423 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 TCP10Q12799 353 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 INF2Q27J81 1249 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 BTNL9Q6UXG8 535 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 ZNF70Q9UC06 446 aaPredicted RBP12.47□□□□□ -0.41
ZIC4-216ENST00000494569 SMTNL1A8MU46 457 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 GOLGA6L19H0YKK7 550 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 MMP14P50281 582 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 DNTTIP2Q5QJE6 756 aaKnown RBP12.47□□□□□ -0.41
ZIC4-216ENST00000494569 FAM151AQ8WW52 585 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 PYM1Q9BRP8 204 aaKnown RBP12.47□□□□□ -0.41
ZIC4-216ENST00000494569 ZNF277Q9NRM2 450 aaPredicted RBP12.47□□□□□ -0.41
ZIC4-216ENST00000494569 HERC5Q9UII4 1024 aaKnown RBP12.47□□□□□ -0.41
ZIC4-216ENST00000494569 ZNRF3Q9ULT6 936 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 FAM196BA6NMK8 535 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 PTGS1P23219 599 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 PBX1P40424 430 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 EIF6P56537 245 aaKnown RBP12.47□□□□□ -0.41
ZIC4-216ENST00000494569 NONOQ15233 471 aaKnown RBP eCLIP12.47□□□□□ -0.41
ZIC4-216ENST00000494569 LRRC8AQ8IWT6 810 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 MLKLQ8NB16 471 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 CRYGNQ8WXF5 182 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 WBP1LQ9NX94 342 aa12.47□□□□□ -0.41
ZIC4-216ENST00000494569 SEC63Q9UGP8 760 aaKnown RBP12.47□□□□□ -0.41
ZIC4-216ENST00000494569 HOOK1Q9UJC3 728 aaKnown RBP12.47□□□□□ -0.41
ZIC4-216ENST00000494569 CCDC194A0A1B0GVG4 234 aa12.46□□□□□ -0.41
ZIC4-216ENST00000494569 ZBTB5O15062 677 aa12.46□□□□□ -0.41
ZIC4-216ENST00000494569 NYAP1Q6ZVC0 841 aa12.46□□□□□ -0.41
ZIC4-216ENST00000494569 TRIM5Q9C035 493 aa12.46□□□□□ -0.41
ZIC4-216ENST00000494569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.42
ZIC4-216ENST00000494569 TMEM88BA6NKF7 163 aa12.46□□□□□ -0.42
ZIC4-216ENST00000494569 MYL5Q02045 173 aa12.46□□□□□ -0.42
ZIC4-216ENST00000494569 FMR1Q06787 632 aaKnown RBP eCLIP12.46□□□□□ -0.42
ZIC4-216ENST00000494569 SEPT2Q15019 361 aa12.46□□□□□ -0.42
ZIC4-216ENST00000494569 IGSF22Q8N9C0 903 aa12.46□□□□□ -0.42
ZIC4-216ENST00000494569 ENOX1Q8TC92 643 aaKnown RBP12.46□□□□□ -0.42
ZIC4-216ENST00000494569 GSDMAQ96QA5 445 aa12.46□□□□□ -0.42
ZIC4-216ENST00000494569 SMARCE1Q969G3 411 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 COA7Q96BR5 231 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 DHX58Q96C10 678 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 MBOAT7Q96N66 472 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 TAF1DQ9H5J8 278 aaPredicted RBP12.45□□□□□ -0.42
ZIC4-216ENST00000494569 GPCPD1Q9NPB8 672 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 TMEM260Q9NX78 707 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 RASSF10A6NK89 507 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 USP17L10C9JJH3 530 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 LRMPQ12912 555 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 ARMCX5Q6P1M9 558 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 NEK8Q86SG6 692 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 FAM83AQ86UY5 434 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 AK8Q96MA6 479 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 WDR81Q562E7 1941 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 A0A1W2PRG0 241 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 PPP1R3GB7ZBB8 358 aa12.45□□□□□ -0.42
ZIC4-216ENST00000494569 ITGBL1O95965 494 aaPredicted RBP12.45□□□□□ -0.42
ZIC4-216ENST00000494569 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
ZIC4-216ENST00000494569 ERCC5P28715 1186 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms