RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 USP17L19D6RCP7 530 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 USP17L20D6RJB6 530 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 TRAPPC10P48553 1259 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 USP17L24Q0WX57 530 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 NONOQ15233 471 aaKnown RBP eCLIP23.54■■□□□ 1.36
KPNA1-210ENST00000494339 ZNF174Q15697 407 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 CAVIN1Q6NZI2 390 aaKnown RBP23.54■■□□□ 1.36
KPNA1-210ENST00000494339 USP17L6PQ6QN14 398 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 ATG4CQ96DT6 458 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 ZNF536O15090 1300 aa23.54■■□□□ 1.36
KPNA1-210ENST00000494339 DEKP35659 375 aaKnown RBP23.53■■□□□ 1.36
KPNA1-210ENST00000494339 TRAF1Q13077 416 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 PPIL2Q13356 520 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 TREML2Q5T2D2 321 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 GADL1Q6ZQY3 521 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 CATSPERGQ6ZRH7 1159 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 CPXCR1Q8N123 301 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 SYAP1Q96A49 352 aaPredicted RBP23.53■■□□□ 1.36
KPNA1-210ENST00000494339 SLC10A4Q96EP9 437 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 WNK4Q96J92 1243 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 AGBL1Q96MI9 1066 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 SLC38A10Q9HBR0 1119 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.53■■□□□ 1.36
KPNA1-210ENST00000494339 A0A0G2JLL6 359 aaPredicted RBP23.53■■□□□ 1.36
KPNA1-210ENST00000494339 ICAM1P05362 532 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 CLK2P49760 499 aaKnown RBP23.53■■□□□ 1.36
KPNA1-210ENST00000494339 CHADLQ6NUI6 762 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 PRRT2Q7Z6L0 340 aaPredicted RBP23.53■■□□□ 1.36
KPNA1-210ENST00000494339 GLT8D2Q9H1C3 349 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 CCPG1Q9ULG6 757 aa23.53■■□□□ 1.36
KPNA1-210ENST00000494339 CTDP1Q9Y5B0 961 aaPredicted RBP23.53■■□□□ 1.36
KPNA1-210ENST00000494339 CXCL11O14625 94 aa23.52■■□□□ 1.36
KPNA1-210ENST00000494339 OPLAHO14841 1288 aa23.52■■□□□ 1.36
KPNA1-210ENST00000494339 MCM7P33993 719 aa23.52■■□□□ 1.36
KPNA1-210ENST00000494339 COG2Q14746 738 aa23.52■■□□□ 1.36
KPNA1-210ENST00000494339 TBCKQ8TEA7 893 aa23.52■■□□□ 1.36
KPNA1-210ENST00000494339 RAVER2Q9HCJ3 691 aaKnown RBP23.52■■□□□ 1.36
KPNA1-210ENST00000494339 CEP131Q9UPN4 1083 aa23.52■■□□□ 1.36
KPNA1-210ENST00000494339 KCNH4Q9UQ05 1017 aa23.52■■□□□ 1.36
KPNA1-210ENST00000494339 COL11A1P12107 1806 aaPredicted RBP23.52■■□□□ 1.36
KPNA1-210ENST00000494339 VWA5AO00534 786 aa23.51■■□□□ 1.35
KPNA1-210ENST00000494339 PPP6R2O75170 966 aa23.51■■□□□ 1.35
KPNA1-210ENST00000494339 ITGBL1O95965 494 aaPredicted RBP23.51■■□□□ 1.35
KPNA1-210ENST00000494339 FKBP1BP68106 108 aa23.51■■□□□ 1.35
KPNA1-210ENST00000494339 C2orf69Q8N8R5 385 aa23.51■■□□□ 1.35
KPNA1-210ENST00000494339 JMYQ8N9B5 988 aa23.51■■□□□ 1.35
KPNA1-210ENST00000494339 MRVI1Q9Y6F6 885 aa23.51■■□□□ 1.35
KPNA1-210ENST00000494339 LOC285556D6RIA3 1793 aa23.51■■□□□ 1.35
KPNA1-210ENST00000494339 MEIS2O14770 477 aa23.51■■□□□ 1.35
KPNA1-210ENST00000494339 ZBED4O75132 1171 aa23.51■■□□□ 1.35
KPNA1-210ENST00000494339 DSG3P32926 999 aa23.51■■□□□ 1.35
KPNA1-210ENST00000494339 GJA5P36382 358 aa23.51■■□□□ 1.35
KPNA1-210ENST00000494339 ADALQ6DHV7 355 aa23.5■■□□□ 1.35
KPNA1-210ENST00000494339 MRPL11Q9Y3B7 192 aaKnown RBP23.5■■□□□ 1.35
KPNA1-210ENST00000494339 ABCB11O95342 1321 aa23.5■■□□□ 1.35
KPNA1-210ENST00000494339 HOXA13P31271 388 aaPredicted RBP23.49■■□□□ 1.35
KPNA1-210ENST00000494339 LETM2Q2VYF4 491 aa23.49■■□□□ 1.35
KPNA1-210ENST00000494339 NEK8Q86SG6 692 aa23.49■■□□□ 1.35
KPNA1-210ENST00000494339 PROCA1Q8NCQ7 364 aaPredicted RBP23.49■■□□□ 1.35
KPNA1-210ENST00000494339 MYH7BA7E2Y1 1941 aa23.49■■□□□ 1.35
KPNA1-210ENST00000494339 UNCXA6NJT0 531 aa23.49■■□□□ 1.35
KPNA1-210ENST00000494339 LIG1P18858 919 aa23.49■■□□□ 1.35
KPNA1-210ENST00000494339 AXDND1Q5T1B0 1012 aaPredicted RBP23.49■■□□□ 1.35
KPNA1-210ENST00000494339 CST9Q5W186 159 aa23.49■■□□□ 1.35
KPNA1-210ENST00000494339 CFBP00751 764 aa23.48■■□□□ 1.35
KPNA1-210ENST00000494339 FDX1P10109 184 aa23.48■■□□□ 1.35
KPNA1-210ENST00000494339 ALAS1P13196 640 aa23.48■■□□□ 1.35
KPNA1-210ENST00000494339 PTGDRQ13258 359 aa23.48■■□□□ 1.35
KPNA1-210ENST00000494339 CCAR1Q8IX12 1150 aaKnown RBP23.48■■□□□ 1.35
KPNA1-210ENST00000494339 TBC1D5Q92609 795 aa23.48■■□□□ 1.35
KPNA1-210ENST00000494339 CLIC6Q96NY7 704 aa23.48■■□□□ 1.35
KPNA1-210ENST00000494339 GPBP1L1Q9HC44 474 aaPredicted RBP23.48■■□□□ 1.35
KPNA1-210ENST00000494339 HOMER2Q9NSB8 354 aa23.48■■□□□ 1.35
KPNA1-210ENST00000494339 HOXC10Q9NYD6 342 aa23.48■■□□□ 1.35
KPNA1-210ENST00000494339 TMEM63CQ9P1W3 806 aa23.48■■□□□ 1.35
KPNA1-210ENST00000494339 TRPM7Q96QT4 1865 aa23.48■■□□□ 1.35
KPNA1-210ENST00000494339 SPDYE16A6NNV3 312 aaPredicted RBP23.47■■□□□ 1.35
KPNA1-210ENST00000494339 BMP15O95972 392 aa23.47■■□□□ 1.35
KPNA1-210ENST00000494339 ZSCAN23Q3MJ62 389 aa23.47■■□□□ 1.35
KPNA1-210ENST00000494339 KRI1Q8N9T8 703 aaKnown RBP23.47■■□□□ 1.35
KPNA1-210ENST00000494339 P2RX7Q99572 595 aaKnown RBP23.47■■□□□ 1.35
KPNA1-210ENST00000494339 ADAMTS5Q9UNA0 930 aa23.47■■□□□ 1.35
KPNA1-210ENST00000494339 CCNT1O60563 726 aaKnown RBP23.47■■□□□ 1.35
KPNA1-210ENST00000494339 ZNF445P59923 1031 aa23.47■■□□□ 1.35
KPNA1-210ENST00000494339 MKRN3Q13064 507 aaKnown RBP23.47■■□□□ 1.35
KPNA1-210ENST00000494339 ANO3Q9BYT9 981 aa23.47■■□□□ 1.35
KPNA1-210ENST00000494339 GOLPH3LQ9H4A5 285 aa23.47■■□□□ 1.35
KPNA1-210ENST00000494339 FBXO2Q9UK22 296 aaPredicted RBP23.47■■□□□ 1.35
KPNA1-210ENST00000494339 ATP2C1P98194 919 aaPredicted RBP23.46■■□□□ 1.35
KPNA1-210ENST00000494339 GRIN1Q05586 938 aa23.46■■□□□ 1.35
KPNA1-210ENST00000494339 AP3B2Q13367 1082 aa23.46■■□□□ 1.35
KPNA1-210ENST00000494339 FSIP1Q8NA03 581 aa23.46■■□□□ 1.35
KPNA1-210ENST00000494339 REPS2Q8NFH8 660 aa23.46■■□□□ 1.35
KPNA1-210ENST00000494339 A0A1W2PQ27 194 aa23.45■■□□□ 1.35
KPNA1-210ENST00000494339 A0A1W2PQ64 194 aa23.45■■□□□ 1.35
KPNA1-210ENST00000494339 A0A1W2PQD8 194 aa23.45■■□□□ 1.35
KPNA1-210ENST00000494339 GOLGA6L3A6NEY3 463 aa23.45■■□□□ 1.35
KPNA1-210ENST00000494339 SPDYE3A6NKU9 549 aa23.45■■□□□ 1.35
KPNA1-210ENST00000494339 PIK3CDO00329 1044 aa23.45■■□□□ 1.35
KPNA1-210ENST00000494339 PTPREP23469 700 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms