RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 MPP2Q14168 576 aa3.48□□□□□ -1.85
CDC42EP3-205ENST00000494083 MLANAQ16655 118 aa3.48□□□□□ -1.85
CDC42EP3-205ENST00000494083 RELL1Q8IUW5 271 aa3.48□□□□□ -1.85
CDC42EP3-205ENST00000494083 POU5F2Q8N7G0 328 aa3.48□□□□□ -1.85
CDC42EP3-205ENST00000494083 DIRC2Q96SL1 478 aa3.48□□□□□ -1.85
CDC42EP3-205ENST00000494083 JAG1P78504 1218 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 CLCQ05315 142 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 TMC3Q7Z5M5 1100 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 IL17RAQ96F46 866 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 KREMEN1Q96MU8 473 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 DUSP13Q9UII6 198 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 ABCC6O95255 1503 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 CPS1P31327 1500 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 ATP7BP35670 1465 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 ARAP2Q8WZ64 1704 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 GREM1O60565 184 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 SRFP11831 508 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 ETV3P41162 512 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 YARSP54577 528 aaKnown RBP3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 TMCO4Q5TGY1 634 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 TMEM59LQ9UK28 342 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 NUP188Q5SRE5 1749 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 ZNF142P52746 1687 aaPredicted RBP3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 MLH3Q9UHC1 1453 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 SLC22A31A6NKX4 558 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 BIN1O00499 593 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 EGR3Q06889 387 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 MESP2Q0VG99 397 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 ZPBP2Q6X784 338 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 HS2ST1Q7LGA3 356 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 CCDC84Q86UT8 332 aaPredicted RBP3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 KCNQ5Q9NR82 932 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 USP35Q9P2H5 1018 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 TACC3Q9Y6A5 838 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 DLEC1Q9Y238 1755 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 NWD1Q149M9 1564 aa3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 TRPM3Q9HCF6 1732 aaPredicted RBP3.47□□□□□ -1.85
CDC42EP3-205ENST00000494083 UBR2Q8IWV8 1755 aa3.46□□□□□ -1.85
CDC42EP3-205ENST00000494083 KIR3DL1P43629 444 aa3.46□□□□□ -1.85
CDC42EP3-205ENST00000494083 MFAP1P55081 439 aaKnown RBP3.46□□□□□ -1.85
CDC42EP3-205ENST00000494083 APOBRQ0VD83 1088 aa3.46□□□□□ -1.85
CDC42EP3-205ENST00000494083 CWF19L2Q2TBE0 894 aaKnown RBP3.46□□□□□ -1.85
CDC42EP3-205ENST00000494083 TMEM87AQ8NBN3 555 aa3.46□□□□□ -1.85
CDC42EP3-205ENST00000494083 KIRREL1Q96J84 757 aa3.46□□□□□ -1.85
CDC42EP3-205ENST00000494083 FAM86C1Q9NVL1 165 aa3.46□□□□□ -1.85
CDC42EP3-205ENST00000494083 TIAM2Q8IVF5 1701 aa3.46□□□□□ -1.85
CDC42EP3-205ENST00000494083 TDRD9Q8NDG6 1382 aaKnown RBP3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 ARHGAP5Q13017 1502 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 WNK3Q9BYP7 1800 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 FSD2A1L4K1 749 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 LTKP29376 864 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 TTC6Q86TZ1 520 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 EAF1Q96JC9 268 aaPredicted RBP3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 PRKRIP1Q9H875 184 aaPredicted RBP3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 SP110Q9HB58 689 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 LRP5O75197 1615 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 KIF7Q2M1P5 1343 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 EIF5BO60841 1220 aaKnown RBP3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 RECKO95980 971 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 KRT1P04264 644 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 ZGLP1P0C6A0 271 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 CYP7A1P22680 504 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 MCM4P33991 863 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 FANCCQ00597 558 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 MPZL3Q6UWV2 235 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 THAP5Q7Z6K1 395 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 VWCEQ96DN2 955 aa3.46□□□□□ -1.86
CDC42EP3-205ENST00000494083 RAG1P15918 1043 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 KIR3DS1Q14943 382 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 TSPYL5Q86VY4 417 aaPredicted RBP3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 RNF141Q8WVD5 230 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 CCDC74BQ96LY2 380 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 PPT2Q9UMR5 302 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 SHANK3Q9BYB0 1731 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 PIK3R4Q99570 1358 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 MAP2P11137 1827 aaKnown RBP3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 NKTRP30414 1462 aaKnown RBP3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 MEIS1O00470 390 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 SDHBP21912 280 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 GDNFP39905 211 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 RACK1P63244 317 aaKnown RBP3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 CLEC17AQ6ZS10 378 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 PIWIL2Q8TC59 973 aaKnown RBP3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 RNF32Q9H0A6 362 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 MRC1P22897 1456 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 FAM135BQ49AJ0 1406 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 NINLQ9Y2I6 1382 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 FKTNO75072 461 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 ACRP10323 421 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 ERCC3P19447 782 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 PWP1Q13610 501 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 CCDC184Q52MB2 194 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 TMEM192Q8IY95 271 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 ATG4CQ96DT6 458 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 LRRC3Q9BY71 257 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 LMCD1Q9NZU5 365 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 GMIPQ9P107 970 aa3.45□□□□□ -1.86
CDC42EP3-205ENST00000494083 KRTAP4-8A0A0G2JLE6 195 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms